RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 ACTL7BQ9Y614 415 aa29.25■■■□□ 2.27
CSPG5-205ENST00000610462 ZNF487B1APH4 448 aa29.24■■■□□ 2.27
CSPG5-205ENST00000610462 APOL1O14791 398 aa29.24■■■□□ 2.27
CSPG5-205ENST00000610462 CA9Q16790 459 aa29.24■■■□□ 2.27
CSPG5-205ENST00000610462 GNASQ5JWF2 1037 aa29.24■■■□□ 2.27
CSPG5-205ENST00000610462 C1orf228Q6PIY5 440 aa29.24■■■□□ 2.27
CSPG5-205ENST00000610462 ZC3H18Q86VM9 953 aaKnown RBP29.24■■■□□ 2.27
CSPG5-205ENST00000610462 PQLC3Q8N755 202 aa29.24■■■□□ 2.27
CSPG5-205ENST00000610462 RASSF4Q9H2L5 321 aa29.24■■■□□ 2.27
CSPG5-205ENST00000610462 VPS37BQ9H9H4 285 aa29.24■■■□□ 2.27
CSPG5-205ENST00000610462 GTF2IRD1Q9UHL9 959 aa29.24■■■□□ 2.27
CSPG5-205ENST00000610462 GCAP28676 217 aa29.24■■■□□ 2.27
CSPG5-205ENST00000610462 GAD2Q05329 585 aa29.24■■■□□ 2.27
CSPG5-205ENST00000610462 SLC9A4Q6AI14 798 aa29.24■■■□□ 2.27
CSPG5-205ENST00000610462 B3GALNT2Q8NCR0 500 aa29.24■■■□□ 2.27
CSPG5-205ENST00000610462 ZNF670Q9BS34 389 aa29.24■■■□□ 2.27
CSPG5-205ENST00000610462 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP29.23■■■□□ 2.27
CSPG5-205ENST00000610462 FOXO6A8MYZ6 492 aa29.23■■■□□ 2.27
CSPG5-205ENST00000610462 H7C0C1 242 aa29.23■■■□□ 2.27
CSPG5-205ENST00000610462 FAM163BP0C2L3 166 aa29.23■■■□□ 2.27
CSPG5-205ENST00000610462 BRAFP15056 766 aa29.23■■■□□ 2.27
CSPG5-205ENST00000610462 TFE3P19532 575 aaPredicted RBP29.23■■■□□ 2.27
CSPG5-205ENST00000610462 ATP5OP48047 213 aa29.23■■■□□ 2.27
CSPG5-205ENST00000610462 C6orf89Q6UWU4 347 aa29.23■■■□□ 2.27
CSPG5-205ENST00000610462 CCDC13Q8IYE1 715 aa29.23■■■□□ 2.27
CSPG5-205ENST00000610462 PCDH19Q8TAB3 1148 aa29.23■■■□□ 2.27
CSPG5-205ENST00000610462 MAML1Q92585 1016 aa29.23■■■□□ 2.27
CSPG5-205ENST00000610462 FAF2Q96CS3 445 aa29.23■■■□□ 2.27
CSPG5-205ENST00000610462 SEC16BQ96JE7 1060 aa29.23■■■□□ 2.27
CSPG5-205ENST00000610462 E7ESA3 106 aa29.22■■■□□ 2.27
CSPG5-205ENST00000610462 XPO1O14980 1071 aaKnown RBP29.22■■■□□ 2.27
CSPG5-205ENST00000610462 TKTP29401 623 aaKnown RBP29.22■■■□□ 2.27
CSPG5-205ENST00000610462 FNBP1LQ5T0N5 605 aa29.22■■■□□ 2.27
CSPG5-205ENST00000610462 TADA2BQ86TJ2 420 aa29.22■■■□□ 2.27
CSPG5-205ENST00000610462 ZFP42Q96MM3 310 aa29.22■■■□□ 2.27
CSPG5-205ENST00000610462 HNRNPABQ99729 332 aaKnown RBP29.22■■■□□ 2.27
CSPG5-205ENST00000610462 KCNK9Q9NPC2 374 aa29.22■■■□□ 2.27
CSPG5-205ENST00000610462 KIAA0754O94854 1291 aa29.22■■■□□ 2.27
CSPG5-205ENST00000610462 CYBAP13498 195 aa29.22■■■□□ 2.27
CSPG5-205ENST00000610462 BCAR1P56945 870 aa29.22■■■□□ 2.27
CSPG5-205ENST00000610462 NBPF20Q3BBV1 942 aa29.22■■■□□ 2.27
CSPG5-205ENST00000610462 GKAP1Q5VSY0 366 aaPredicted RBP29.22■■■□□ 2.27
CSPG5-205ENST00000610462 YTHDF3Q7Z739 585 aaKnown RBP29.22■■■□□ 2.27
CSPG5-205ENST00000610462 PPCSQ9HAB8 311 aa29.22■■■□□ 2.27
CSPG5-205ENST00000610462 ZMYND8Q9ULU4 1186 aaPredicted RBP29.22■■■□□ 2.27
CSPG5-205ENST00000610462 TCRBV7S3A2A0A539 114 aa29.21■■■□□ 2.27
CSPG5-205ENST00000610462 CYB561D2O14569 222 aa29.21■■■□□ 2.27
CSPG5-205ENST00000610462 BANF1O75531 89 aa29.21■■■□□ 2.27
CSPG5-205ENST00000610462 TMEM63AO94886 807 aa29.21■■■□□ 2.27
CSPG5-205ENST00000610462 NR1H3Q13133 447 aa29.21■■■□□ 2.27
CSPG5-205ENST00000610462 TMED2Q15363 201 aa29.21■■■□□ 2.27
CSPG5-205ENST00000610462 RSPH3Q86UC2 560 aa29.21■■■□□ 2.27
CSPG5-205ENST00000610462 ANKMY2Q8IV38 441 aa29.21■■■□□ 2.27
CSPG5-205ENST00000610462 TAB3Q8N5C8 712 aaPredicted RBP29.21■■■□□ 2.27
CSPG5-205ENST00000610462 USP29Q9HBJ7 922 aa29.21■■■□□ 2.27
CSPG5-205ENST00000610462 XPO7Q9UIA9 1087 aaKnown RBP29.21■■■□□ 2.27
CSPG5-205ENST00000610462 ST3GAL5Q9UNP4 418 aa29.21■■■□□ 2.27
CSPG5-205ENST00000610462 BASP1P80723 227 aaKnown RBP29.21■■■□□ 2.27
CSPG5-205ENST00000610462 MSS51Q4VC12 460 aa29.21■■■□□ 2.27
CSPG5-205ENST00000610462 EFHC1Q5JVL4 640 aa29.21■■■□□ 2.27
CSPG5-205ENST00000610462 GDF6Q6KF10 455 aaPredicted RBP29.21■■■□□ 2.27
CSPG5-205ENST00000610462 CXCL17Q6UXB2 119 aa29.21■■■□□ 2.27
CSPG5-205ENST00000610462 CACNA2D3Q8IZS8 1091 aa29.21■■■□□ 2.27
CSPG5-205ENST00000610462 PYROXD1Q8WU10 500 aa29.21■■■□□ 2.27
CSPG5-205ENST00000610462 DUSP16Q9BY84 665 aa29.21■■■□□ 2.27
CSPG5-205ENST00000610462 ADAM33Q9BZ11 813 aa29.21■■■□□ 2.27
CSPG5-205ENST00000610462 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP29.21■■■□□ 2.27
CSPG5-205ENST00000610462 CFAP69A5D8W1 941 aa29.2■■■□□ 2.26
CSPG5-205ENST00000610462 IFNAR2P48551 515 aa29.2■■■□□ 2.26
CSPG5-205ENST00000610462 GPX6P59796 221 aa29.2■■■□□ 2.26
CSPG5-205ENST00000610462 SREBF2Q12772 1141 aa29.2■■■□□ 2.26
CSPG5-205ENST00000610462 DPYSL2Q16555 572 aa29.2■■■□□ 2.26
CSPG5-205ENST00000610462 SRRM1Q8IYB3 904 aaKnown RBP29.2■■■□□ 2.26
CSPG5-205ENST00000610462 FUKQ8N0W3 1084 aa29.2■■■□□ 2.26
CSPG5-205ENST00000610462 UPF3AQ9H1J1 476 aaKnown RBP29.2■■■□□ 2.26
CSPG5-205ENST00000610462 UBN1Q9NPG3 1134 aa29.2■■■□□ 2.26
CSPG5-205ENST00000610462 FAM105AQ9NUU6 356 aa29.2■■■□□ 2.26
CSPG5-205ENST00000610462 SLC38A7Q9NVC3 462 aa29.2■■■□□ 2.26
CSPG5-205ENST00000610462 CLUHO75153 1309 aa29.2■■■□□ 2.26
CSPG5-205ENST00000610462 POC1B-GALNT4F8VUJ3 575 aa29.19■■■□□ 2.26
CSPG5-205ENST00000610462 ATP2C2O75185 946 aa29.19■■■□□ 2.26
CSPG5-205ENST00000610462 L1CAMP32004 1257 aa29.19■■■□□ 2.26
CSPG5-205ENST00000610462 NRLP54845 237 aa29.19■■■□□ 2.26
CSPG5-205ENST00000610462 PPP6R3Q5H9R7 873 aaPredicted RBP29.19■■■□□ 2.26
CSPG5-205ENST00000610462 MFSD14CQ5VZR4 134 aa29.19■■■□□ 2.26
CSPG5-205ENST00000610462 CAPN12Q6ZSI9 719 aa29.19■■■□□ 2.26
CSPG5-205ENST00000610462 LRRC34Q8IZ02 419 aa29.19■■■□□ 2.26
CSPG5-205ENST00000610462 ATP11CQ8NB49 1132 aa29.19■■■□□ 2.26
CSPG5-205ENST00000610462 MGARPQ8TDB4 240 aa29.19■■■□□ 2.26
CSPG5-205ENST00000610462 DYDC1Q8WWB3 177 aa29.19■■■□□ 2.26
CSPG5-205ENST00000610462 RTP4Q96DX8 246 aa29.19■■■□□ 2.26
CSPG5-205ENST00000610462 HEY1Q9Y5J3 304 aa29.19■■■□□ 2.26
CSPG5-205ENST00000610462 FAM155AB1AL88 458 aaPredicted RBP29.19■■■□□ 2.26
CSPG5-205ENST00000610462 PTPN1P18031 435 aaKnown RBP29.19■■■□□ 2.26
CSPG5-205ENST00000610462 PHBP35232 272 aa29.19■■■□□ 2.26
CSPG5-205ENST00000610462 RNASELQ05823 741 aaKnown RBP29.19■■■□□ 2.26
CSPG5-205ENST00000610462 RASA2Q15283 850 aa29.19■■■□□ 2.26
CSPG5-205ENST00000610462 WSCD1Q658N2 575 aa29.19■■■□□ 2.26
CSPG5-205ENST00000610462 PIGZQ86VD9 579 aa29.19■■■□□ 2.26
CSPG5-205ENST00000610462 HACE1Q8IYU2 909 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms