RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 NDUFV2P19404 249 aa15.92■□□□□ 0.14
SSBP4-214ENST00000607020 YWHAQP27348 245 aa15.92■□□□□ 0.14
SSBP4-214ENST00000607020 MDH1BQ5I0G3 518 aa15.92■□□□□ 0.14
SSBP4-214ENST00000607020 WDR45BQ5MNZ6 344 aa15.92■□□□□ 0.14
SSBP4-214ENST00000607020 HECTD3Q5T447 861 aa15.92■□□□□ 0.14
SSBP4-214ENST00000607020 SDE2Q6IQ49 451 aa15.92■□□□□ 0.14
SSBP4-214ENST00000607020 METTL3Q86U44 580 aaKnown RBP15.92■□□□□ 0.14
SSBP4-214ENST00000607020 SLCO6A1Q86UG4 719 aa15.92■□□□□ 0.14
SSBP4-214ENST00000607020 TMEM25Q86YD3 366 aa15.92■□□□□ 0.14
SSBP4-214ENST00000607020 NUP93Q8N1F7 819 aa15.92■□□□□ 0.14
SSBP4-214ENST00000607020 GPD1LQ8N335 351 aa15.92■□□□□ 0.14
SSBP4-214ENST00000607020 NAT16Q8N8M0 369 aa15.92■□□□□ 0.14
SSBP4-214ENST00000607020 DNASE2BQ8WZ79 361 aa15.92■□□□□ 0.14
SSBP4-214ENST00000607020 TMX3Q96JJ7 454 aa15.92■□□□□ 0.14
SSBP4-214ENST00000607020 TMEM30AQ9NV96 361 aa15.92■□□□□ 0.14
SSBP4-214ENST00000607020 OBSL1O75147 1896 aa15.92■□□□□ 0.14
SSBP4-214ENST00000607020 LAMA5O15230 3695 aa15.92■□□□□ 0.14
SSBP4-214ENST00000607020 FRMD3A2A2Y4 597 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 ZNF233A6NK53 670 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 H3BQV1 296 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 GFRA2O00451 464 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 DKK1O94907 266 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 GCNT3O95395 438 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 TNNC2P02585 160 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 ZDHHC11BP0C7U3 371 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 ZNF883P0CG24 379 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 CASP5P51878 434 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 CACNA2D1P54289 1103 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 DBX2Q6ZNG2 339 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 HS2ST1Q7LGA3 356 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 TMPRSS7Q7RTY8 843 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 BBS7Q8IWZ6 715 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 SYCP3Q8IZU3 236 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 PNPLA1Q8N8W4 532 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 MMS19Q96T76 1030 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 MRPL45Q9BRJ2 306 aaKnown RBP15.91■□□□□ 0.14
SSBP4-214ENST00000607020 SNX25Q9H3E2 840 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 COMMD8Q9NX08 183 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 PCOLCE2Q9UKZ9 415 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 CYP8B1Q9UNU6 501 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 SH3BP1Q9Y3L3 701 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 NME7Q9Y5B8 376 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 PTPRDP23468 1912 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 LOC400499M0QZD8 3231 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 APC2O95996 2303 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 PTPRJQ12913 1337 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 MYO16Q9Y6X6 1858 aa15.91■□□□□ 0.14
SSBP4-214ENST00000607020 GCN1Q92616 2671 aaKnown RBP15.9■□□□□ 0.14
SSBP4-214ENST00000607020 MYH11P35749 1972 aa15.9■□□□□ 0.14
SSBP4-214ENST00000607020 PCDH15Q96QU1 1955 aa15.9■□□□□ 0.14
SSBP4-214ENST00000607020 FAM92AA1XBS5 289 aa15.9■□□□□ 0.14
SSBP4-214ENST00000607020 TULP1O00294 542 aaPredicted RBP15.9■□□□□ 0.14
SSBP4-214ENST00000607020 NDUFS2O75306 463 aa15.9■□□□□ 0.14
SSBP4-214ENST00000607020 GRIK2Q13002 908 aa15.9■□□□□ 0.14
SSBP4-214ENST00000607020 EGFLAMQ63HQ2 1017 aa15.9■□□□□ 0.14
SSBP4-214ENST00000607020 GRAMD4Q6IC98 578 aa15.9■□□□□ 0.14
SSBP4-214ENST00000607020 HTR3DQ70Z44 454 aa15.9■□□□□ 0.14
SSBP4-214ENST00000607020 SV2BQ7L1I2 683 aa15.9■□□□□ 0.14
SSBP4-214ENST00000607020 WDR49Q8IV35 697 aa15.9■□□□□ 0.14
SSBP4-214ENST00000607020 FBXO32Q969P5 355 aa15.9■□□□□ 0.14
SSBP4-214ENST00000607020 EPSTI1Q96J88 318 aa15.9■□□□□ 0.14
SSBP4-214ENST00000607020 MRGPRX1Q96LB2 322 aa15.9■□□□□ 0.14
SSBP4-214ENST00000607020 BBC3Q96PG8 261 aaPredicted RBP15.9■□□□□ 0.14
SSBP4-214ENST00000607020 ACOX2Q99424 681 aa15.9■□□□□ 0.14
SSBP4-214ENST00000607020 B3GNT5Q9BYG0 378 aa15.9■□□□□ 0.14
SSBP4-214ENST00000607020 ZNF518BQ9C0D4 1074 aa15.9■□□□□ 0.14
SSBP4-214ENST00000607020 PCIF1Q9H4Z3 704 aa15.9■□□□□ 0.14
SSBP4-214ENST00000607020 TBC1D7Q9P0N9 293 aa15.9■□□□□ 0.14
SSBP4-214ENST00000607020 ACACAQ13085 2346 aa15.9■□□□□ 0.14
SSBP4-214ENST00000607020 PI4KAP42356 2102 aa15.89■□□□□ 0.13
SSBP4-214ENST00000607020 ZNF638Q14966 1978 aaKnown RBP15.89■□□□□ 0.13
SSBP4-214ENST00000607020 A0A1B0GTW7 788 aa15.89■□□□□ 0.13
SSBP4-214ENST00000607020 TRIM24O15164 1050 aa15.89■□□□□ 0.13
SSBP4-214ENST00000607020 CACNG3O60359 315 aa15.89■□□□□ 0.13
SSBP4-214ENST00000607020 GREM1O60565 184 aa15.89■□□□□ 0.13
SSBP4-214ENST00000607020 CST3P01034 146 aaPredicted RBP15.89■□□□□ 0.13
SSBP4-214ENST00000607020 WASP42768 502 aa15.89■□□□□ 0.13
SSBP4-214ENST00000607020 ANO4Q32M45 955 aa15.89■□□□□ 0.13
SSBP4-214ENST00000607020 USP49Q70CQ1 688 aa15.89■□□□□ 0.13
SSBP4-214ENST00000607020 TRAPPC11Q7Z392 1133 aa15.89■□□□□ 0.13
SSBP4-214ENST00000607020 CHPFQ8IZ52 775 aa15.89■□□□□ 0.13
SSBP4-214ENST00000607020 RGL4Q8IZJ4 473 aa15.89■□□□□ 0.13
SSBP4-214ENST00000607020 CADM4Q8NFZ8 388 aa15.89■□□□□ 0.13
SSBP4-214ENST00000607020 OR6B3Q8NGW1 331 aa15.89■□□□□ 0.13
SSBP4-214ENST00000607020 MDM1Q8TC05 714 aa15.89■□□□□ 0.13
SSBP4-214ENST00000607020 HNRNPLLQ8WVV9 542 aaKnown RBP15.89■□□□□ 0.13
SSBP4-214ENST00000607020 COL26A1Q96A83 441 aa15.89■□□□□ 0.13
SSBP4-214ENST00000607020 XPO6Q96QU8 1125 aaKnown RBP15.89■□□□□ 0.13
SSBP4-214ENST00000607020 KIAA1586Q9HCI6 787 aa15.89■□□□□ 0.13
SSBP4-214ENST00000607020 CACNA2D2Q9NY47 1150 aa15.89■□□□□ 0.13
SSBP4-214ENST00000607020 MARK1Q9P0L2 795 aa15.89■□□□□ 0.13
SSBP4-214ENST00000607020 WDR35Q9P2L0 1181 aa15.89■□□□□ 0.13
SSBP4-214ENST00000607020 CCDC39Q9UFE4 941 aa15.89■□□□□ 0.13
SSBP4-214ENST00000607020 CHORDC1Q9UHD1 332 aaPredicted RBP15.89■□□□□ 0.13
SSBP4-214ENST00000607020 RAXQ9Y2V3 346 aa15.89■□□□□ 0.13
SSBP4-214ENST00000607020 ANK1P16157 1881 aa15.88■□□□□ 0.13
SSBP4-214ENST00000607020 SETXQ7Z333 2677 aaKnown RBP15.88■□□□□ 0.13
SSBP4-214ENST00000607020 PRRT4C9JH25 899 aa15.88■□□□□ 0.13
SSBP4-214ENST00000607020 STAU1O95793 577 aaKnown RBP15.88■□□□□ 0.13
SSBP4-214ENST00000607020 CD6P30203 668 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms