RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 GPC3P51654 580 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 NOMO3P69849 1222 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 MMRN1Q13201 1228 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 HNRNPDQ14103 355 aaKnown RBP16.03■□□□□ 0.16
RER1-209ENST00000605895 PDE1CQ14123 709 aaPredicted RBP16.03■□□□□ 0.16
RER1-209ENST00000605895 WDR44Q5JSH3 913 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 TRMT10BQ6PF06 316 aaKnown RBP16.03■□□□□ 0.16
RER1-209ENST00000605895 ALKBH8Q96BT7 664 aaKnown RBP16.03■□□□□ 0.16
RER1-209ENST00000605895 FOXP3Q9BZS1 431 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 XAB2Q9HCS7 855 aaKnown RBP16.03■□□□□ 0.16
RER1-209ENST00000605895 MRPL47Q9HD33 250 aaKnown RBP16.03■□□□□ 0.16
RER1-209ENST00000605895 A0A0B4J269 797 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 MYBPC1Q00872 1141 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 SLC44A4Q53GD3 710 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 ATG14Q6ZNE5 492 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 HACE1Q8IYU2 909 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 ZSCAN18Q8TBC5 510 aaPredicted RBP16.03■□□□□ 0.16
RER1-209ENST00000605895 AVENQ9NQS1 362 aaPredicted RBP16.03■□□□□ 0.16
RER1-209ENST00000605895 SMYD2Q9NRG4 433 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 PLLPQ9Y342 182 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 C10orf71Q711Q0 1435 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 PDLIM1O00151 329 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 TRMUO75648 421 aaKnown RBP16.03■□□□□ 0.16
RER1-209ENST00000605895 HLA-DRAP01903 254 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 SERPINB5P36952 375 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 CDKN2BP42772 138 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 NAA20P61599 178 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 CDKL1Q00532 357 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 SPP2Q13103 211 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 DCTN2Q13561 401 aaKnown RBP16.03■□□□□ 0.16
RER1-209ENST00000605895 ITPRIPL1Q6GPH6 555 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 DNAJC24Q6P3W2 148 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 SCARA5Q6ZMJ2 495 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 DPH6Q7L8W6 267 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 TTC13Q8NBP0 860 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 IL31RAQ8NI17 732 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 ZNF778Q96MU6 729 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 ARMC7Q9H6L4 198 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 SUDS3Q9H7L9 328 aaPredicted RBP16.03■□□□□ 0.16
RER1-209ENST00000605895 APOBEC2Q9Y235 224 aaKnown RBP16.03■□□□□ 0.16
RER1-209ENST00000605895 NR2E3Q9Y5X4 410 aa16.03■□□□□ 0.16
RER1-209ENST00000605895 CNTNAP2Q9UHC6 1331 aa16.02■□□□□ 0.16
RER1-209ENST00000605895 ZNFX1Q9P2E3 1918 aaKnown RBP16.02■□□□□ 0.16
RER1-209ENST00000605895 XPOTO43592 962 aaKnown RBP16.02■□□□□ 0.16
RER1-209ENST00000605895 SIN3BO75182 1162 aa16.02■□□□□ 0.16
RER1-209ENST00000605895 IL1R2P27930 398 aa16.02■□□□□ 0.16
RER1-209ENST00000605895 EMP3P54852 163 aa16.02■□□□□ 0.16
RER1-209ENST00000605895 CDH15P55291 814 aa16.02■□□□□ 0.16
RER1-209ENST00000605895 TMEM259Q4ZIN3 620 aa16.02■□□□□ 0.16
RER1-209ENST00000605895 ATG16L1Q676U5 607 aa16.02■□□□□ 0.16
RER1-209ENST00000605895 ZNF554Q86TJ5 538 aa16.02■□□□□ 0.16
RER1-209ENST00000605895 CHSY1Q86X52 802 aa16.02■□□□□ 0.16
RER1-209ENST00000605895 SLF2Q8IX21 1173 aa16.02■□□□□ 0.16
RER1-209ENST00000605895 RNF168Q8IYW5 571 aaPredicted RBP16.02■□□□□ 0.16
RER1-209ENST00000605895 SLC44A1Q8WWI5 657 aa16.02■□□□□ 0.16
RER1-209ENST00000605895 BSNDQ8WZ55 320 aa16.02■□□□□ 0.16
RER1-209ENST00000605895 FAF2Q96CS3 445 aa16.02■□□□□ 0.16
RER1-209ENST00000605895 ATXN7L3BQ96GX2 97 aa16.02■□□□□ 0.16
RER1-209ENST00000605895 GPAMQ9HCL2 828 aa16.02■□□□□ 0.16
RER1-209ENST00000605895 TBX20Q9UMR3 447 aa16.02■□□□□ 0.16
RER1-209ENST00000605895 PTPRJQ12913 1337 aa16.02■□□□□ 0.16
RER1-209ENST00000605895 NEMP1O14524 444 aa16.02■□□□□ 0.15
RER1-209ENST00000605895 RBP3P10745 1247 aa16.02■□□□□ 0.15
RER1-209ENST00000605895 VARSP26640 1264 aaKnown RBP16.02■□□□□ 0.15
RER1-209ENST00000605895 ENTPD1P49961 510 aa16.02■□□□□ 0.15
RER1-209ENST00000605895 EIF3EP60228 445 aaKnown RBP16.02■□□□□ 0.15
RER1-209ENST00000605895 SLC39A4Q6P5W5 647 aa16.02■□□□□ 0.15
RER1-209ENST00000605895 DARS2Q6PI48 645 aaKnown RBP16.02■□□□□ 0.15
RER1-209ENST00000605895 ANKRD23Q86SG2 305 aa16.02■□□□□ 0.15
RER1-209ENST00000605895 DHRS4Q9BTZ2 278 aa16.02■□□□□ 0.15
RER1-209ENST00000605895 OXCT2Q9BYC2 517 aaPredicted RBP16.02■□□□□ 0.15
RER1-209ENST00000605895 APOBEC3GQ9HC16 384 aaKnown RBP16.02■□□□□ 0.15
RER1-209ENST00000605895 RAB6BQ9NRW1 208 aa16.02■□□□□ 0.15
RER1-209ENST00000605895 FBXO28Q9NVF7 368 aa16.02■□□□□ 0.15
RER1-209ENST00000605895 STX16-NPEPL1H3BU86 382 aa16.01■□□□□ 0.15
RER1-209ENST00000605895 ITGB5P18084 799 aa16.01■□□□□ 0.15
RER1-209ENST00000605895 NT5C2P49902 561 aa16.01■□□□□ 0.15
RER1-209ENST00000605895 MAPK10P53779 464 aa16.01■□□□□ 0.15
RER1-209ENST00000605895 IGBP1P78318 339 aa16.01■□□□□ 0.15
RER1-209ENST00000605895 CRADDP78560 199 aa16.01■□□□□ 0.15
RER1-209ENST00000605895 GRM2Q14416 872 aa16.01■□□□□ 0.15
RER1-209ENST00000605895 FASTKD1Q53R41 847 aaKnown RBP16.01■□□□□ 0.15
RER1-209ENST00000605895 RAB6CQ53S08 254 aa16.01■□□□□ 0.15
RER1-209ENST00000605895 ZBTB41Q5SVQ8 909 aa16.01■□□□□ 0.15
RER1-209ENST00000605895 BSPRYQ5W0U4 402 aa16.01■□□□□ 0.15
RER1-209ENST00000605895 PGLYRP2Q96PD5 576 aa16.01■□□□□ 0.15
RER1-209ENST00000605895 SENP6Q9GZR1 1112 aaPredicted RBP16.01■□□□□ 0.15
RER1-209ENST00000605895 RAB6CQ9H0N0 254 aa16.01■□□□□ 0.15
RER1-209ENST00000605895 RNPEPQ9H4A4 650 aa16.01■□□□□ 0.15
RER1-209ENST00000605895 PARVAQ9NVD7 372 aa16.01■□□□□ 0.15
RER1-209ENST00000605895 TCEAL9Q9UHQ7 104 aa16.01■□□□□ 0.15
RER1-209ENST00000605895 GNEQ9Y223 722 aaKnown RBP16.01■□□□□ 0.15
RER1-209ENST00000605895 PHLPP1O60346 1717 aa16.01■□□□□ 0.15
RER1-209ENST00000605895 G3V3G9 751 aa16.01■□□□□ 0.15
RER1-209ENST00000605895 H3BNX3 289 aa16.01■□□□□ 0.15
RER1-209ENST00000605895 CSPG5O95196 566 aa16.01■□□□□ 0.15
RER1-209ENST00000605895 SERPINA6P08185 405 aa16.01■□□□□ 0.15
RER1-209ENST00000605895 CSH1P0DML2 217 aa16.01■□□□□ 0.15
RER1-209ENST00000605895 CSH2P0DML3 217 aa16.01■□□□□ 0.15
RER1-209ENST00000605895 YWHABP31946 246 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms