RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 MED15Q96RN5 788 aa25.02■■□□□ 1.6
SSX2IP-209ENST00000603677 NACA2Q9H009 215 aa25.02■■□□□ 1.6
SSX2IP-209ENST00000603677 PRMT8Q9NR22 394 aaPredicted RBP25.02■■□□□ 1.6
SSX2IP-209ENST00000603677 MBD3O95983 291 aa25.01■■□□□ 1.59
SSX2IP-209ENST00000603677 SP9P0CG40 484 aa25.01■■□□□ 1.59
SSX2IP-209ENST00000603677 NRLP54845 237 aa25.01■■□□□ 1.59
SSX2IP-209ENST00000603677 ZXDBP98169 803 aa25.01■■□□□ 1.59
SSX2IP-209ENST00000603677 LRMPQ12912 555 aa25.01■■□□□ 1.59
SSX2IP-209ENST00000603677 CNGA2Q16280 664 aa25.01■■□□□ 1.59
SSX2IP-209ENST00000603677 PM20D1Q6GTS8 502 aa25.01■■□□□ 1.59
SSX2IP-209ENST00000603677 TMEM270Q6UE05 265 aa25.01■■□□□ 1.59
SSX2IP-209ENST00000603677 ADGRG2Q8IZP9 1017 aa25.01■■□□□ 1.59
SSX2IP-209ENST00000603677 TSPAN16Q9UKR8 245 aa25.01■■□□□ 1.59
SSX2IP-209ENST00000603677 ATG13O75143 517 aa25■■□□□ 1.59
SSX2IP-209ENST00000603677 RALAP11233 206 aa25■■□□□ 1.59
SSX2IP-209ENST00000603677 GJA4P35212 333 aa25■■□□□ 1.59
SSX2IP-209ENST00000603677 EIF2DP41214 584 aaKnown RBP25■■□□□ 1.59
SSX2IP-209ENST00000603677 PLA2G4AP47712 749 aa25■■□□□ 1.59
SSX2IP-209ENST00000603677 SOX9P48436 509 aa25■■□□□ 1.59
SSX2IP-209ENST00000603677 TRIM68Q6AZZ1 485 aa25■■□□□ 1.59
SSX2IP-209ENST00000603677 TXNDC11Q6PKC3 985 aa25■■□□□ 1.59
SSX2IP-209ENST00000603677 GBP6Q6ZN66 633 aa25■■□□□ 1.59
SSX2IP-209ENST00000603677 PIGZQ86VD9 579 aa25■■□□□ 1.59
SSX2IP-209ENST00000603677 IRF2BP1Q8IU81 584 aa25■■□□□ 1.59
SSX2IP-209ENST00000603677 KCTD13Q8WZ19 329 aa25■■□□□ 1.59
SSX2IP-209ENST00000603677 ZFRQ96KR1 1074 aaKnown RBP25■■□□□ 1.59
SSX2IP-209ENST00000603677 INTS2Q9H0H0 1204 aaKnown RBP25■■□□□ 1.59
SSX2IP-209ENST00000603677 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25■■□□□ 1.59
SSX2IP-209ENST00000603677 PCDHB4Q9Y5E5 795 aa25■■□□□ 1.59
SSX2IP-209ENST00000603677 WNT6Q9Y6F9 365 aa25■■□□□ 1.59
SSX2IP-209ENST00000603677 FANCMQ8IYD8 2048 aa25■■□□□ 1.59
SSX2IP-209ENST00000603677 O00370 1275 aa24.99■■□□□ 1.59
SSX2IP-209ENST00000603677 ARSAP15289 507 aa24.99■■□□□ 1.59
SSX2IP-209ENST00000603677 CD19P15391 556 aa24.99■■□□□ 1.59
SSX2IP-209ENST00000603677 MRE11P49959 708 aa24.99■■□□□ 1.59
SSX2IP-209ENST00000603677 MFAP3P55082 362 aa24.99■■□□□ 1.59
SSX2IP-209ENST00000603677 COL4A3Q01955 1670 aa24.99■■□□□ 1.59
SSX2IP-209ENST00000603677 MTAPQ13126 283 aa24.99■■□□□ 1.59
SSX2IP-209ENST00000603677 PON2Q15165 354 aa24.99■■□□□ 1.59
SSX2IP-209ENST00000603677 MAN2A1Q16706 1144 aa24.99■■□□□ 1.59
SSX2IP-209ENST00000603677 DPCR1Q3MIW9 517 aa24.99■■□□□ 1.59
SSX2IP-209ENST00000603677 PREPLQ4J6C6 727 aaPredicted RBP24.99■■□□□ 1.59
SSX2IP-209ENST00000603677 GPRIN1Q7Z2K8 1008 aa24.99■■□□□ 1.59
SSX2IP-209ENST00000603677 MAML2Q8IZL2 1156 aaPredicted RBP24.99■■□□□ 1.59
SSX2IP-209ENST00000603677 NELL1Q92832 810 aa24.99■■□□□ 1.59
SSX2IP-209ENST00000603677 P2RY13Q9BPV8 354 aa24.99■■□□□ 1.59
SSX2IP-209ENST00000603677 CCSER2Q9H7U1 834 aa24.99■■□□□ 1.59
SSX2IP-209ENST00000603677 CFAP97Q9P2B7 532 aa24.99■■□□□ 1.59
SSX2IP-209ENST00000603677 DNMT3LQ9UJW3 386 aa24.99■■□□□ 1.59
SSX2IP-209ENST00000603677 SH3BP1Q9Y3L3 701 aa24.99■■□□□ 1.59
SSX2IP-209ENST00000603677 PCDHGA2Q9Y5H1 932 aa24.99■■□□□ 1.59
SSX2IP-209ENST00000603677 MYO16Q9Y6X6 1858 aa24.98■■□□□ 1.59
SSX2IP-209ENST00000603677 OTOL1A6NHN0 477 aaPredicted RBP24.98■■□□□ 1.59
SSX2IP-209ENST00000603677 ADH1CP00326 375 aa24.98■■□□□ 1.59
SSX2IP-209ENST00000603677 MTIF2P46199 727 aaKnown RBP24.98■■□□□ 1.59
SSX2IP-209ENST00000603677 ZNF132P52740 706 aa24.98■■□□□ 1.59
SSX2IP-209ENST00000603677 EXOC3L4Q17RC7 722 aa24.98■■□□□ 1.59
SSX2IP-209ENST00000603677 PKDCCQ504Y2 493 aa24.98■■□□□ 1.59
SSX2IP-209ENST00000603677 TRIM65Q6PJ69 517 aa24.98■■□□□ 1.59
SSX2IP-209ENST00000603677 HTR3DQ70Z44 454 aa24.98■■□□□ 1.59
SSX2IP-209ENST00000603677 TTC30AQ86WT1 665 aa24.98■■□□□ 1.59
SSX2IP-209ENST00000603677 RARGP13631 454 aa24.97■■□□□ 1.59
SSX2IP-209ENST00000603677 HOXA6P31267 233 aa24.97■■□□□ 1.59
SSX2IP-209ENST00000603677 CXCL12P48061 93 aa24.97■■□□□ 1.59
SSX2IP-209ENST00000603677 GOLGA7BQ2TAP0 167 aa24.97■■□□□ 1.59
SSX2IP-209ENST00000603677 CD101Q93033 1021 aa24.97■■□□□ 1.59
SSX2IP-209ENST00000603677 NKD2Q969F2 451 aaPredicted RBP24.97■■□□□ 1.59
SSX2IP-209ENST00000603677 KLF16Q9BXK1 252 aaPredicted RBP24.97■■□□□ 1.59
SSX2IP-209ENST00000603677 LINC00597Q9H2U6 94 aa24.97■■□□□ 1.59
SSX2IP-209ENST00000603677 LRRC4Q9HBW1 653 aa24.97■■□□□ 1.59
SSX2IP-209ENST00000603677 CNGB3Q9NQW8 809 aa24.97■■□□□ 1.59
SSX2IP-209ENST00000603677 LSM7Q9UK45 103 aaKnown RBP24.97■■□□□ 1.59
SSX2IP-209ENST00000603677 ZNF510Q9Y2H8 683 aa24.97■■□□□ 1.59
SSX2IP-209ENST00000603677 CHURC1-FNTBB4DL54 471 aa24.96■■□□□ 1.59
SSX2IP-209ENST00000603677 CYP26A1O43174 497 aa24.96■■□□□ 1.59
SSX2IP-209ENST00000603677 ZBED1O96006 694 aa24.96■■□□□ 1.59
SSX2IP-209ENST00000603677 EEF1GP26641 437 aaKnown RBP24.96■■□□□ 1.59
SSX2IP-209ENST00000603677 COG7P83436 770 aa24.96■■□□□ 1.59
SSX2IP-209ENST00000603677 PDE4CQ08493 712 aa24.96■■□□□ 1.59
SSX2IP-209ENST00000603677 RRAGAQ7L523 313 aa24.96■■□□□ 1.59
SSX2IP-209ENST00000603677 RBBP8NLQ8NC74 664 aaPredicted RBP24.96■■□□□ 1.59
SSX2IP-209ENST00000603677 TTC8Q8TAM2 541 aa24.96■■□□□ 1.59
SSX2IP-209ENST00000603677 ENOX1Q8TC92 643 aaKnown RBP24.96■■□□□ 1.59
SSX2IP-209ENST00000603677 GPT2Q8TD30 523 aa24.96■■□□□ 1.59
SSX2IP-209ENST00000603677 HSFY1Q96LI6 401 aa24.96■■□□□ 1.59
SSX2IP-209ENST00000603677 UBE2TQ9NPD8 197 aaPredicted RBP24.96■■□□□ 1.59
SSX2IP-209ENST00000603677 OLA1Q9NTK5 396 aaKnown RBP24.96■■□□□ 1.59
SSX2IP-209ENST00000603677 ZSCAN32Q9NX65 697 aa24.96■■□□□ 1.59
SSX2IP-209ENST00000603677 SMPD4Q9NXE4 827 aa24.96■■□□□ 1.59
SSX2IP-209ENST00000603677 APEX2Q9UBZ4 518 aa24.96■■□□□ 1.59
SSX2IP-209ENST00000603677 NAGPAQ9UK23 515 aa24.96■■□□□ 1.59
SSX2IP-209ENST00000603677 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.96■■□□□ 1.59
SSX2IP-209ENST00000603677 A0A1W2PQH9 124 aa24.95■■□□□ 1.58
SSX2IP-209ENST00000603677 MED7O43513 233 aa24.95■■□□□ 1.58
SSX2IP-209ENST00000603677 GALK1P51570 392 aa24.95■■□□□ 1.58
SSX2IP-209ENST00000603677 TKTL1P51854 596 aa24.95■■□□□ 1.58
SSX2IP-209ENST00000603677 DHCR24Q15392 516 aa24.95■■□□□ 1.58
SSX2IP-209ENST00000603677 CREBRFQ8IUR6 639 aa24.95■■□□□ 1.58
SSX2IP-209ENST00000603677 ARHGEF19Q8IW93 802 aa24.95■■□□□ 1.58
SSX2IP-209ENST00000603677 ZBTB44Q8NCP5 570 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms