RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 LDHDQ86WU2 507 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 APOL4Q9BPW4 351 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 PI4K2AQ9BTU6 479 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 NARFQ9UHQ1 456 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 SLC39A10Q9ULF5 831 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 ITIH6Q6UXX5 1313 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 PLA2R1Q13018 1463 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 A0A1W2PQ72 361 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 ENTPD5O75356 428 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 POU5F1Q01860 360 aaKnown RBP8.98□□□□□ -0.97
CSMD1-216ENST00000602557 DGCR6Q14129 220 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 PIGHQ14442 188 aaPredicted RBP8.98□□□□□ -0.97
CSMD1-216ENST00000602557 UGP2Q16851 508 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 PCNX4Q63HM2 1172 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 YME1L1Q96TA2 773 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 DNAJC16Q9Y2G8 782 aa8.98□□□□□ -0.97
CSMD1-216ENST00000602557 MYH2Q9UKX2 1941 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 UNC13BO14795 1591 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 SNRPAP09012 282 aaKnown RBP8.97□□□□□ -0.97
CSMD1-216ENST00000602557 VAV1P15498 845 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 TCF3P15923 654 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 ITIH2P19823 946 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 ATP6V1C1P21283 382 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 KPNA1P52294 538 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-216ENST00000602557 USP46P62068 366 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 TMEM62Q0P6H9 643 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 XRCC4Q13426 336 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 SCARF1Q14162 830 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 TSEN2Q8NCE0 465 aaKnown RBP8.97□□□□□ -0.97
CSMD1-216ENST00000602557 WDR48Q8TAF3 677 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 HTRA1Q92743 480 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 C7orf25Q9BPX7 421 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 SNX9Q9Y5X1 595 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 NINQ8N4C6 2090 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 EEF2KO00418 725 aaKnown RBP8.97□□□□□ -0.97
CSMD1-216ENST00000602557 TRAPPC3O43617 180 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 IFI35P80217 286 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-216ENST00000602557 NEK5Q6P3R8 708 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 CAVIN3Q969G5 261 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 SGF29Q96ES7 293 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 DMGDHQ9UI17 866 aaKnown RBP8.97□□□□□ -0.97
CSMD1-216ENST00000602557 TARBP1Q13395 1621 aaKnown RBP8.97□□□□□ -0.97
CSMD1-216ENST00000602557 ETFBP38117 255 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 COILP38432 576 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-216ENST00000602557 SPIDRQ14159 915 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 PDIA5Q14554 519 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 EMC2Q15006 297 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 CHSY1Q86X52 802 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 APOBEC3FQ8IUX4 373 aaKnown RBP8.97□□□□□ -0.97
CSMD1-216ENST00000602557 ECSITQ9BQ95 431 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 PABPC3Q9H361 631 aaKnown RBP8.97□□□□□ -0.97
CSMD1-216ENST00000602557 COPS7BQ9H9Q2 264 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-216ENST00000602557 NMRK1Q9NWW6 199 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 SPEF1Q9Y4P9 236 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 INO80Q9ULG1 1556 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-216ENST00000602557 MYMKA6NI61 221 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 ZNF197O14709 1029 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 HMBSP08397 361 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 KRT20P35900 424 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 TRADDQ15628 312 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 PLA2G4FQ68DD2 849 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 CENPLQ8N0S6 344 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-216ENST00000602557 POC5Q8NA72 575 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 TRPV5Q9NQA5 729 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 DNAAF2Q9NVR5 837 aaKnown RBP8.97□□□□□ -0.97
CSMD1-216ENST00000602557 AGAP1Q9UPQ3 857 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 DDX5P17844 614 aaKnown RBP8.97□□□□□ -0.97
CSMD1-216ENST00000602557 CSTF3Q12996 717 aaKnown RBP8.97□□□□□ -0.97
CSMD1-216ENST00000602557 LRRC20Q8TCA0 184 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 SH3TC2Q8TF17 1288 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 MAGP20916 626 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 ZC2HC1CQ53FD0 456 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-216ENST00000602557 C2orf69Q8N8R5 385 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 INTS13Q9NVM9 706 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 PDK1Q15118 436 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 OTUD3Q5T2D3 398 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-216ENST00000602557 TAF8Q7Z7C8 310 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 EFCAB3Q8N7B9 438 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 SLC7A14Q8TBB6 771 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 MED26O95402 600 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 RXRBP28702 533 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 EGFLAMQ63HQ2 1017 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 CENPPQ6IPU0 288 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 LRRC8DQ7L1W4 858 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 SKA1Q96BD8 255 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 MED15Q96RN5 788 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 SLC7A5P2Q9GIP4 190 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 PIM2Q9P1W9 311 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 A0A087WXM4 84 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 LIN7AO14910 233 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-216ENST00000602557 FKBP6O75344 327 aa8.97□□□□□ -0.97
CSMD1-216ENST00000602557 OXNAD1Q96HP4 312 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-216ENST00000602557 KCTD14Q9BQ13 255 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-216ENST00000602557 RABL2AQ9UBK7 228 aaPredicted RBP8.97□□□□□ -0.97
CSMD1-216ENST00000602557 CCDC182A6NF36 153 aa8.96□□□□□ -0.97
CSMD1-216ENST00000602557 SEC24AO95486 1093 aa8.96□□□□□ -0.97
CSMD1-216ENST00000602557 SLC16A1P53985 500 aa8.96□□□□□ -0.97
CSMD1-216ENST00000602557 ZNF772Q68DY9 489 aaPredicted RBP8.96□□□□□ -0.97
CSMD1-216ENST00000602557 RNF148Q8N7C7 305 aa8.96□□□□□ -0.97
CSMD1-216ENST00000602557 ZNF512Q96ME7 567 aaPredicted RBP8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms