RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 MBL2P11226 248 aaPredicted RBP21.11■□□□□ 0.97
SSBP4-210ENST00000601444 PFKLP17858 780 aa21.11■□□□□ 0.97
SSBP4-210ENST00000601444 PTK2Q05397 1052 aa21.11■□□□□ 0.97
SSBP4-210ENST00000601444 TNK2Q07912 1038 aa21.11■□□□□ 0.97
SSBP4-210ENST00000601444 TRIM68Q6AZZ1 485 aa21.11■□□□□ 0.97
SSBP4-210ENST00000601444 PM20D1Q6GTS8 502 aa21.11■□□□□ 0.97
SSBP4-210ENST00000601444 BHLHA9Q7RTU4 235 aa21.11■□□□□ 0.97
SSBP4-210ENST00000601444 IRF7Q92985 503 aa21.11■□□□□ 0.97
SSBP4-210ENST00000601444 KIF9Q9HAQ2 790 aa21.11■□□□□ 0.97
SSBP4-210ENST00000601444 ARHGEF3Q9NR81 526 aa21.11■□□□□ 0.97
SSBP4-210ENST00000601444 GKN1Q9NS71 199 aa21.11■□□□□ 0.97
SSBP4-210ENST00000601444 NAGPAQ9UK23 515 aa21.11■□□□□ 0.97
SSBP4-210ENST00000601444 LEFTY2O00292 366 aa21.1■□□□□ 0.97
SSBP4-210ENST00000601444 SCAMP3O14828 347 aaKnown RBP21.1■□□□□ 0.97
SSBP4-210ENST00000601444 MDM4O15151 490 aa21.1■□□□□ 0.97
SSBP4-210ENST00000601444 TLR5O60602 858 aa21.1■□□□□ 0.97
SSBP4-210ENST00000601444 RARGP13631 454 aa21.1■□□□□ 0.97
SSBP4-210ENST00000601444 RFX1P22670 979 aa21.1■□□□□ 0.97
SSBP4-210ENST00000601444 TUBP50607 506 aa21.1■□□□□ 0.97
SSBP4-210ENST00000601444 PDE6CP51160 858 aa21.1■□□□□ 0.97
SSBP4-210ENST00000601444 PFKPQ01813 784 aa21.1■□□□□ 0.97
SSBP4-210ENST00000601444 USP4Q13107 963 aa21.1■□□□□ 0.97
SSBP4-210ENST00000601444 LRSAM1Q6UWE0 723 aa21.1■□□□□ 0.97
SSBP4-210ENST00000601444 BMP8AQ7Z5Y6 402 aa21.1■□□□□ 0.97
SSBP4-210ENST00000601444 PASD1Q8IV76 773 aa21.1■□□□□ 0.97
SSBP4-210ENST00000601444 WDTC1Q8N5D0 677 aa21.1■□□□□ 0.97
SSBP4-210ENST00000601444 NEK11Q8NG66 645 aa21.1■□□□□ 0.97
SSBP4-210ENST00000601444 CLEC4CQ8WTT0 213 aa21.1■□□□□ 0.97
SSBP4-210ENST00000601444 WBP2Q969T9 261 aa21.1■□□□□ 0.97
SSBP4-210ENST00000601444 ZFRQ96KR1 1074 aaKnown RBP21.1■□□□□ 0.97
SSBP4-210ENST00000601444 CYLDQ9NQC7 956 aa21.1■□□□□ 0.97
SSBP4-210ENST00000601444 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.1■□□□□ 0.97
SSBP4-210ENST00000601444 A0A1B0GTH6 734 aa21.09■□□□□ 0.97
SSBP4-210ENST00000601444 SHISA7A6NL88 538 aa21.09■□□□□ 0.97
SSBP4-210ENST00000601444 CAVIN2O95810 425 aa21.09■□□□□ 0.97
SSBP4-210ENST00000601444 CD72P21854 359 aa21.09■□□□□ 0.97
SSBP4-210ENST00000601444 JAM2P57087 298 aa21.09■□□□□ 0.97
SSBP4-210ENST00000601444 MTF1Q14872 753 aa21.09■□□□□ 0.97
SSBP4-210ENST00000601444 ARHGAP29Q52LW3 1261 aa21.09■□□□□ 0.97
SSBP4-210ENST00000601444 FAM83CQ9BQN1 747 aa21.09■□□□□ 0.97
SSBP4-210ENST00000601444 LINC00597Q9H2U6 94 aa21.09■□□□□ 0.97
SSBP4-210ENST00000601444 THG1LQ9NWX6 298 aaKnown RBP21.09■□□□□ 0.97
SSBP4-210ENST00000601444 GTSE1Q9NYZ3 720 aa21.09■□□□□ 0.97
SSBP4-210ENST00000601444 MYO16Q9Y6X6 1858 aa21.09■□□□□ 0.97
SSBP4-210ENST00000601444 YJEFN3A6XGL0 299 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 E7ENQ6 273 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 GFPT2O94808 682 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 SERPINC1P01008 464 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 ARSAP15289 507 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 CYP11B1P15538 503 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 YWHAGP61981 247 aaKnown RBP eCLIP21.08■□□□□ 0.97
SSBP4-210ENST00000601444 FANCCQ00597 558 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 NR1I3Q14994 352 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 MLF2Q15773 248 aaPredicted RBP21.08■□□□□ 0.97
SSBP4-210ENST00000601444 SIX6OS1Q8N1H7 587 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 FLCNQ8NFG4 579 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 DNASE1L2Q92874 299 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 HSFY1Q96LI6 401 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 NACA2Q9H009 215 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 MIS12Q9H081 205 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 MFSD1Q9H3U5 465 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 TSPY26PQ9H489 355 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 EBF3Q9H4W6 596 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 TRPV5Q9NQA5 729 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 HPS4Q9NQG7 708 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 ST7Q9NRC1 585 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 CFAP97Q9P2B7 532 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 TJP2Q9UDY2 1190 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 PCDHGC3Q9UN70 934 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 WNT6Q9Y6F9 365 aa21.08■□□□□ 0.97
SSBP4-210ENST00000601444 FAM170AA1A519 330 aa21.07■□□□□ 0.96
SSBP4-210ENST00000601444 OTOL1A6NHN0 477 aaPredicted RBP21.07■□□□□ 0.96
SSBP4-210ENST00000601444 GOLGA6L19H0YKK7 550 aa21.07■□□□□ 0.96
SSBP4-210ENST00000601444 TCF3P15923 654 aa21.07■□□□□ 0.96
SSBP4-210ENST00000601444 ATP5C1P36542 298 aaKnown RBP21.07■□□□□ 0.96
SSBP4-210ENST00000601444 SOX9P48436 509 aa21.07■□□□□ 0.96
SSBP4-210ENST00000601444 RPL34P49207 117 aaKnown RBP21.07■□□□□ 0.96
SSBP4-210ENST00000601444 PSEN1P49768 467 aa21.07■□□□□ 0.96
SSBP4-210ENST00000601444 DAOAP59103 153 aa21.07■□□□□ 0.96
SSBP4-210ENST00000601444 TPM4P67936 248 aa21.07■□□□□ 0.96
SSBP4-210ENST00000601444 FILIP1LQ4L180 1135 aa21.07■□□□□ 0.96
SSBP4-210ENST00000601444 C10orf120Q5SQS8 335 aa21.07■□□□□ 0.96
SSBP4-210ENST00000601444 TAF3Q5VWG9 929 aa21.07■□□□□ 0.96
SSBP4-210ENST00000601444 CWF19L1Q69YN2 538 aaKnown RBP21.07■□□□□ 0.96
SSBP4-210ENST00000601444 SMYD5Q6GMV2 418 aa21.07■□□□□ 0.96
SSBP4-210ENST00000601444 CC2D1AQ6P1N0 951 aaPredicted RBP21.07■□□□□ 0.96
SSBP4-210ENST00000601444 TPRG1Q6ZUI0 275 aa21.07■□□□□ 0.96
SSBP4-210ENST00000601444 NOP9Q86U38 636 aaKnown RBP21.07■□□□□ 0.96
SSBP4-210ENST00000601444 SCUBE3Q8IX30 993 aa21.07■□□□□ 0.96
SSBP4-210ENST00000601444 FBXL6Q8N531 539 aa21.07■□□□□ 0.96
SSBP4-210ENST00000601444 DDX1Q92499 740 aaKnown RBP21.07■□□□□ 0.96
SSBP4-210ENST00000601444 SLC4A5Q9BY07 1137 aa21.07■□□□□ 0.96
SSBP4-210ENST00000601444 TBC1D17Q9HA65 648 aa21.07■□□□□ 0.96
SSBP4-210ENST00000601444 CNGB3Q9NQW8 809 aa21.07■□□□□ 0.96
SSBP4-210ENST00000601444 CLIC5Q9NZA1 410 aa21.07■□□□□ 0.96
SSBP4-210ENST00000601444 STK25O00506 426 aa21.06■□□□□ 0.96
SSBP4-210ENST00000601444 PI15O43692 258 aa21.06■□□□□ 0.96
SSBP4-210ENST00000601444 IRF1P10914 325 aa21.06■□□□□ 0.96
SSBP4-210ENST00000601444 KRT9P35527 623 aa21.06■□□□□ 0.96
SSBP4-210ENST00000601444 SOX5P35711 763 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms