RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 KLHDC10Q6PID8 442 aa18.12■□□□□ 0.49
HERC3-214ENST00000601319 RBM43Q6ZSC3 357 aaKnown RBP18.12■□□□□ 0.49
HERC3-214ENST00000601319 TTC30AQ86WT1 665 aa18.12■□□□□ 0.49
HERC3-214ENST00000601319 ZNF276Q8N554 614 aa18.12■□□□□ 0.49
HERC3-214ENST00000601319 EXOC4Q96A65 974 aa18.12■□□□□ 0.49
HERC3-214ENST00000601319 INTS2Q9H0H0 1204 aaKnown RBP18.12■□□□□ 0.49
HERC3-214ENST00000601319 THAP9Q9H5L6 903 aa18.12■□□□□ 0.49
HERC3-214ENST00000601319 SMPD4Q9NXE4 827 aa18.12■□□□□ 0.49
HERC3-214ENST00000601319 CFAP97Q9P2B7 532 aa18.12■□□□□ 0.49
HERC3-214ENST00000601319 TSPAN16Q9UKR8 245 aa18.12■□□□□ 0.49
HERC3-214ENST00000601319 GTPBP10A4D1E9 387 aaKnown RBP18.11■□□□□ 0.49
HERC3-214ENST00000601319 O00370 1275 aa18.11■□□□□ 0.49
HERC3-214ENST00000601319 GJA4P35212 333 aa18.11■□□□□ 0.49
HERC3-214ENST00000601319 PGFP49763 221 aa18.11■□□□□ 0.49
HERC3-214ENST00000601319 CCR3P51677 355 aa18.11■□□□□ 0.49
HERC3-214ENST00000601319 ZNF132P52740 706 aa18.11■□□□□ 0.49
HERC3-214ENST00000601319 BST2Q10589 180 aaKnown RBP18.11■□□□□ 0.49
HERC3-214ENST00000601319 NR1H3Q13133 447 aa18.11■□□□□ 0.49
HERC3-214ENST00000601319 GOLGA7BQ2TAP0 167 aa18.11■□□□□ 0.49
HERC3-214ENST00000601319 SMYD5Q6GMV2 418 aa18.11■□□□□ 0.49
HERC3-214ENST00000601319 ZC3H14Q6PJT7 736 aaKnown RBP18.11■□□□□ 0.49
HERC3-214ENST00000601319 TMEM270Q6UE05 265 aa18.11■□□□□ 0.49
HERC3-214ENST00000601319 PIGZQ86VD9 579 aa18.11■□□□□ 0.49
HERC3-214ENST00000601319 ARHGEF19Q8IW93 802 aa18.11■□□□□ 0.49
HERC3-214ENST00000601319 FAM114A1Q8IWE2 563 aa18.11■□□□□ 0.49
HERC3-214ENST00000601319 SPEM1Q8N4L4 309 aa18.11■□□□□ 0.49
HERC3-214ENST00000601319 GPT2Q8TD30 523 aa18.11■□□□□ 0.49
HERC3-214ENST00000601319 NELL1Q92832 810 aa18.11■□□□□ 0.49
HERC3-214ENST00000601319 OTUB2Q96DC9 234 aa18.11■□□□□ 0.49
HERC3-214ENST00000601319 CLIC5Q9NZA1 410 aa18.11■□□□□ 0.49
HERC3-214ENST00000601319 TBC1D14Q9P2M4 693 aa18.11■□□□□ 0.49
HERC3-214ENST00000601319 HESX1Q9UBX0 185 aa18.11■□□□□ 0.49
HERC3-214ENST00000601319 CNTN6Q9UQ52 1028 aa18.11■□□□□ 0.49
HERC3-214ENST00000601319 XPO1O14980 1071 aaKnown RBP18.1■□□□□ 0.49
HERC3-214ENST00000601319 PAPSS2O95340 614 aaPredicted RBP18.1■□□□□ 0.49
HERC3-214ENST00000601319 SETSIPP0DME0 302 aa18.1■□□□□ 0.49
HERC3-214ENST00000601319 CD19P15391 556 aa18.1■□□□□ 0.49
HERC3-214ENST00000601319 STILQ15468 1287 aa18.1■□□□□ 0.49
HERC3-214ENST00000601319 TRIM65Q6PJ69 517 aa18.1■□□□□ 0.49
HERC3-214ENST00000601319 LCLAT1Q6UWP7 414 aa18.1■□□□□ 0.49
HERC3-214ENST00000601319 TTC16Q8NEE8 873 aa18.1■□□□□ 0.49
HERC3-214ENST00000601319 KAT5Q92993 513 aa18.1■□□□□ 0.49
HERC3-214ENST00000601319 FAM81BQ96LP2 452 aa18.1■□□□□ 0.49
HERC3-214ENST00000601319 CDK5RAP1Q96SZ6 601 aaKnown RBP18.1■□□□□ 0.49
HERC3-214ENST00000601319 FAM126AQ9BYI3 521 aaPredicted RBP18.1■□□□□ 0.49
HERC3-214ENST00000601319 NACA2Q9H009 215 aa18.1■□□□□ 0.49
HERC3-214ENST00000601319 SEMA4AQ9H3S1 761 aa18.1■□□□□ 0.49
HERC3-214ENST00000601319 NMUR1Q9HB89 426 aa18.1■□□□□ 0.49
HERC3-214ENST00000601319 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.1■□□□□ 0.49
HERC3-214ENST00000601319 OSER1Q9NX31 292 aa18.1■□□□□ 0.49
HERC3-214ENST00000601319 A0A1W2PQH9 124 aa18.09■□□□□ 0.49
HERC3-214ENST00000601319 CYP17A1P05093 508 aa18.09■□□□□ 0.49
HERC3-214ENST00000601319 TDGF1P13385 188 aa18.09■□□□□ 0.49
HERC3-214ENST00000601319 DRD1P21728 446 aa18.09■□□□□ 0.49
HERC3-214ENST00000601319 ATP5C1P36542 298 aaKnown RBP18.09■□□□□ 0.49
HERC3-214ENST00000601319 PLA2G4AP47712 749 aa18.09■□□□□ 0.49
HERC3-214ENST00000601319 PDE4CQ08493 712 aa18.09■□□□□ 0.49
HERC3-214ENST00000601319 GRSF1Q12849 480 aaKnown RBP eCLIP18.09■□□□□ 0.49
HERC3-214ENST00000601319 GAS6Q14393 721 aa18.09■□□□□ 0.49
HERC3-214ENST00000601319 PPP2R5DQ14738 602 aa18.09■□□□□ 0.49
HERC3-214ENST00000601319 TPD52L1Q16890 204 aaPredicted RBP18.09■□□□□ 0.49
HERC3-214ENST00000601319 PKDCCQ504Y2 493 aa18.09■□□□□ 0.49
HERC3-214ENST00000601319 FSTL4Q6MZW2 842 aa18.09■□□□□ 0.49
HERC3-214ENST00000601319 RRAGAQ7L523 313 aa18.09■□□□□ 0.49
HERC3-214ENST00000601319 ENOSF1Q7L5Y1 443 aa18.09■□□□□ 0.49
HERC3-214ENST00000601319 SCD5Q86SK9 330 aa18.09■□□□□ 0.49
HERC3-214ENST00000601319 TADA2BQ86TJ2 420 aa18.09■□□□□ 0.49
HERC3-214ENST00000601319 ALYREFQ86V81 257 aaKnown RBP18.09■□□□□ 0.49
HERC3-214ENST00000601319 ARHGAP18Q8N392 663 aa18.09■□□□□ 0.49
HERC3-214ENST00000601319 RBBP8NLQ8NC74 664 aaPredicted RBP18.09■□□□□ 0.49
HERC3-214ENST00000601319 KREMEN1Q96MU8 473 aa18.09■□□□□ 0.49
HERC3-214ENST00000601319 P2RY13Q9BPV8 354 aa18.09■□□□□ 0.49
HERC3-214ENST00000601319 LINC00597Q9H2U6 94 aa18.09■□□□□ 0.49
HERC3-214ENST00000601319 RBM12Q9NTZ6 932 aaKnown RBP18.09■□□□□ 0.49
HERC3-214ENST00000601319 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.09■□□□□ 0.49
HERC3-214ENST00000601319 PCDHB4Q9Y5E5 795 aa18.09■□□□□ 0.49
HERC3-214ENST00000601319 RARGP13631 454 aa18.08■□□□□ 0.48
HERC3-214ENST00000601319 PRKCSHP14314 528 aaPredicted RBP18.08■□□□□ 0.48
HERC3-214ENST00000601319 GOLGA8FQ08AF8 430 aa18.08■□□□□ 0.48
HERC3-214ENST00000601319 GOLGA8DPQ0D2H9 430 aa18.08■□□□□ 0.48
HERC3-214ENST00000601319 MAN2A1Q16706 1144 aa18.08■□□□□ 0.48
HERC3-214ENST00000601319 GAB4Q2WGN9 574 aa18.08■□□□□ 0.48
HERC3-214ENST00000601319 PM20D1Q6GTS8 502 aa18.08■□□□□ 0.48
HERC3-214ENST00000601319 Q6ZS52 159 aa18.08■□□□□ 0.48
HERC3-214ENST00000601319 ADGRG2Q8IZP9 1017 aa18.08■□□□□ 0.48
HERC3-214ENST00000601319 KCTD13Q8WZ19 329 aa18.08■□□□□ 0.48
HERC3-214ENST00000601319 TFAP2BQ92481 460 aa18.08■□□□□ 0.48
HERC3-214ENST00000601319 KLF16Q9BXK1 252 aaPredicted RBP18.08■□□□□ 0.48
HERC3-214ENST00000601319 NAGPAQ9UK23 515 aa18.08■□□□□ 0.48
HERC3-214ENST00000601319 SH3BP1Q9Y3L3 701 aa18.08■□□□□ 0.48
HERC3-214ENST00000601319 PCDHGA2Q9Y5H1 932 aa18.08■□□□□ 0.48
HERC3-214ENST00000601319 EML5Q05BV3 1969 aa18.08■□□□□ 0.48
HERC3-214ENST00000601319 ATG2BQ96BY7 2078 aa18.07■□□□□ 0.48
HERC3-214ENST00000601319 PRR23AA6NEV1 266 aa18.07■□□□□ 0.48
HERC3-214ENST00000601319 RNF225M0QZC1 329 aaPredicted RBP18.07■□□□□ 0.48
HERC3-214ENST00000601319 MBD3O95983 291 aa18.07■□□□□ 0.48
HERC3-214ENST00000601319 ADH1CP00326 375 aa18.07■□□□□ 0.48
HERC3-214ENST00000601319 RALAP11233 206 aa18.07■□□□□ 0.48
HERC3-214ENST00000601319 EIF2DP41214 584 aaKnown RBP18.07■□□□□ 0.48
HERC3-214ENST00000601319 MTIF2P46199 727 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms