RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 TRIM21P19474 475 aaKnown RBP17.98■□□□□ 0.47
SCAF1-204ENST00000601038 GBP1P32455 592 aa17.98■□□□□ 0.47
SCAF1-204ENST00000601038 GRIA2P42262 883 aa17.98■□□□□ 0.47
SCAF1-204ENST00000601038 PIK3CAP42336 1068 aa17.98■□□□□ 0.47
SCAF1-204ENST00000601038 NDUFA8P51970 172 aa17.98■□□□□ 0.47
SCAF1-204ENST00000601038 MAP3K7CLP57077 242 aa17.98■□□□□ 0.47
SCAF1-204ENST00000601038 MESP2Q0VG99 397 aa17.98■□□□□ 0.47
SCAF1-204ENST00000601038 ORC1Q13415 861 aa17.98■□□□□ 0.47
SCAF1-204ENST00000601038 SPOPLQ6IQ16 392 aa17.98■□□□□ 0.47
SCAF1-204ENST00000601038 ANO7Q6IWH7 933 aa17.98■□□□□ 0.47
SCAF1-204ENST00000601038 C12orf29Q8N999 325 aa17.98■□□□□ 0.47
SCAF1-204ENST00000601038 IL17RCQ8NAC3 791 aa17.98■□□□□ 0.47
SCAF1-204ENST00000601038 ARHGEF4Q9NR80 690 aa17.98■□□□□ 0.47
SCAF1-204ENST00000601038 BCLAF3A2AJT9 711 aaKnown RBP17.97■□□□□ 0.47
SCAF1-204ENST00000601038 NR2F2P24468 414 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 TNFRSF4P43489 277 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 KIR2DL1P43626 348 aaPredicted RBP17.97■□□□□ 0.47
SCAF1-204ENST00000601038 CREB5Q02930 508 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 ENPEPQ07075 957 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 INCA1Q0VD86 236 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 DPYDQ12882 1025 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 STPG1Q5TH74 334 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 TMEM92Q6UXU6 159 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 INTS8Q75QN2 995 aaKnown RBP17.97■□□□□ 0.47
SCAF1-204ENST00000601038 SFTPA1Q8IWL2 248 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 BBS7Q8IWZ6 715 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 ABCA7Q8IZY2 2146 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 PHTF2Q8N3S3 785 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 ALLCQ8N6M5 410 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 TXNDC5Q8NBS9 432 aaKnown RBP17.97■□□□□ 0.47
SCAF1-204ENST00000601038 MDGA1Q8NFP4 955 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 CHAMP1Q96JM3 812 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 CNTNAP3BQ96NU0 1288 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 HNRNPABQ99729 332 aaKnown RBP17.97■□□□□ 0.47
SCAF1-204ENST00000601038 CNTNAP3Q9BZ76 1288 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 TPSD1Q9BZJ3 242 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 IMPG2Q9BZV3 1241 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 NACA2Q9H009 215 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 SMOC1Q9H4F8 434 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 CYP3A43Q9HB55 503 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 TLR8Q9NR97 1041 aaKnown RBP17.97■□□□□ 0.47
SCAF1-204ENST00000601038 FAM49BQ9NUQ9 324 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 INVSQ9Y283 1065 aa17.97■□□□□ 0.47
SCAF1-204ENST00000601038 HOXC11O43248 304 aaPredicted RBP17.96■□□□□ 0.47
SCAF1-204ENST00000601038 TLR5O60602 858 aa17.96■□□□□ 0.47
SCAF1-204ENST00000601038 ALDH1A2O94788 518 aa17.96■□□□□ 0.47
SCAF1-204ENST00000601038 KLF8O95600 359 aaPredicted RBP17.96■□□□□ 0.47
SCAF1-204ENST00000601038 CAVIN2O95810 425 aa17.96■□□□□ 0.47
SCAF1-204ENST00000601038 PRR29P0C7W0 189 aa17.96■□□□□ 0.47
SCAF1-204ENST00000601038 FAM200BP0CF97 657 aa17.96■□□□□ 0.47
SCAF1-204ENST00000601038 HNRNPLP14866 589 aaKnown RBP eCLIP17.96■□□□□ 0.47
SCAF1-204ENST00000601038 RPL13P26373 211 aaKnown RBP17.96■□□□□ 0.47
SCAF1-204ENST00000601038 TIE1P35590 1138 aa17.96■□□□□ 0.47
SCAF1-204ENST00000601038 PGFP49763 221 aa17.96■□□□□ 0.47
SCAF1-204ENST00000601038 PREPLQ4J6C6 727 aaPredicted RBP17.96■□□□□ 0.47
SCAF1-204ENST00000601038 EOGTQ5NDL2 527 aa17.96■□□□□ 0.47
SCAF1-204ENST00000601038 EMC10Q5UCC4 262 aa17.96■□□□□ 0.47
SCAF1-204ENST00000601038 BTBD8Q5XKL5 378 aa17.96■□□□□ 0.47
SCAF1-204ENST00000601038 PMS2CLQ68D20 193 aa17.96■□□□□ 0.47
SCAF1-204ENST00000601038 ETFBKMTQ8IXQ9 262 aa17.96■□□□□ 0.47
SCAF1-204ENST00000601038 GUF1Q8N442 669 aaKnown RBP17.96■□□□□ 0.47
SCAF1-204ENST00000601038 KCNV2Q8TDN2 545 aa17.96■□□□□ 0.47
SCAF1-204ENST00000601038 CYFIP2Q96F07 1278 aa17.96■□□□□ 0.47
SCAF1-204ENST00000601038 SCAND2PQ9GZW5 306 aaPredicted RBP17.96■□□□□ 0.47
SCAF1-204ENST00000601038 SPHK2Q9NRA0 654 aa17.96■□□□□ 0.47
SCAF1-204ENST00000601038 MAPK8IP1Q9UQF2 711 aa17.96■□□□□ 0.47
SCAF1-204ENST00000601038 MYH10P35580 1976 aa17.96■□□□□ 0.47
SCAF1-204ENST00000601038 A0A1W2PQ27 194 aa17.95■□□□□ 0.46
SCAF1-204ENST00000601038 A0A1W2PQ64 194 aa17.95■□□□□ 0.46
SCAF1-204ENST00000601038 A0A1W2PQD8 194 aa17.95■□□□□ 0.46
SCAF1-204ENST00000601038 SGK1O00141 431 aa17.95■□□□□ 0.46
SCAF1-204ENST00000601038 KRT13P13646 458 aa17.95■□□□□ 0.46
SCAF1-204ENST00000601038 ADORA2BP29275 332 aa17.95■□□□□ 0.46
SCAF1-204ENST00000601038 PSMC2P35998 433 aaKnown RBP17.95■□□□□ 0.46
SCAF1-204ENST00000601038 GCLMP48507 274 aa17.95■□□□□ 0.46
SCAF1-204ENST00000601038 KDSRQ06136 332 aa17.95■□□□□ 0.46
SCAF1-204ENST00000601038 PPP3CAQ08209 521 aa17.95■□□□□ 0.46
SCAF1-204ENST00000601038 KRBA2Q6ZNG9 492 aa17.95■□□□□ 0.46
SCAF1-204ENST00000601038 CLEC20AQ6ZU45 233 aa17.95■□□□□ 0.46
SCAF1-204ENST00000601038 HTR3DQ70Z44 454 aa17.95■□□□□ 0.46
SCAF1-204ENST00000601038 OLIG1Q8TAK6 271 aa17.95■□□□□ 0.46
SCAF1-204ENST00000601038 TAS1R2Q8TE23 839 aa17.95■□□□□ 0.46
SCAF1-204ENST00000601038 WBP2Q969T9 261 aa17.95■□□□□ 0.46
SCAF1-204ENST00000601038 TWNKQ96RR1 684 aa17.95■□□□□ 0.46
SCAF1-204ENST00000601038 NT5C1AQ9BXI3 368 aa17.95■□□□□ 0.46
SCAF1-204ENST00000601038 KLF16Q9BXK1 252 aaPredicted RBP17.95■□□□□ 0.46
SCAF1-204ENST00000601038 APOBEC3GQ9HC16 384 aaKnown RBP17.95■□□□□ 0.46
SCAF1-204ENST00000601038 PNPLA8Q9NP80 782 aa17.95■□□□□ 0.46
SCAF1-204ENST00000601038 POLMQ9NP87 494 aaPredicted RBP17.95■□□□□ 0.46
SCAF1-204ENST00000601038 CYLDQ9NQC7 956 aa17.95■□□□□ 0.46
SCAF1-204ENST00000601038 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.95■□□□□ 0.46
SCAF1-204ENST00000601038 DEC1Q9P2X7 70 aa17.95■□□□□ 0.46
SCAF1-204ENST00000601038 SCML2Q9UQR0 700 aa17.95■□□□□ 0.46
SCAF1-204ENST00000601038 ATP6V1DQ9Y5K8 247 aa17.95■□□□□ 0.46
SCAF1-204ENST00000601038 MYO18AQ92614 2054 aaKnown RBP17.94■□□□□ 0.46
SCAF1-204ENST00000601038 TBC1D3BA6NDS4 549 aa17.94■□□□□ 0.46
SCAF1-204ENST00000601038 HHLA1C9JL84 531 aa17.94■□□□□ 0.46
SCAF1-204ENST00000601038 TULP3O75386 442 aa17.94■□□□□ 0.46
SCAF1-204ENST00000601038 TRIM49P0CI25 452 aa17.94■□□□□ 0.46
SCAF1-204ENST00000601038 TRIM49CP0CI26 452 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms