RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 NDRG1Q92597 394 aaKnown RBP15.06■□□□□ 0
UPF1-211ENST00000600868 KHSRPQ92945 711 aaKnown RBP eCLIP15.06■□□□□ 0
UPF1-211ENST00000600868 ARHGEF26Q96DR7 871 aa15.06■□□□□ 0
UPF1-211ENST00000600868 PABPC5Q96DU9 382 aaKnown RBP15.06■□□□□ 0
UPF1-211ENST00000600868 MRPL47Q9HD33 250 aaKnown RBP15.06■□□□□ 0
UPF1-211ENST00000600868 TLR8Q9NR97 1041 aaKnown RBP15.06■□□□□ 0
UPF1-211ENST00000600868 MTMR10Q9NXD2 777 aa15.06■□□□□ 0
UPF1-211ENST00000600868 MYO1AQ9UBC5 1043 aa15.06■□□□□ 0
UPF1-211ENST00000600868 SCINQ9Y6U3 715 aa15.06■□□□□ 0
UPF1-211ENST00000600868 CDH23Q9H251 3354 aa15.05■□□□□ 0
UPF1-211ENST00000600868 A0A0A6YYK5 440 aaPredicted RBP15.05■□□□□ -0
UPF1-211ENST00000600868 RCCD1A6NED2 376 aa15.05■□□□□ -0
UPF1-211ENST00000600868 YJEFN3A6XGL0 299 aa15.05■□□□□ -0
UPF1-211ENST00000600868 BTNL10A8MVZ5 291 aa15.05■□□□□ -0
UPF1-211ENST00000600868 E7ENQ6 273 aa15.05■□□□□ -0
UPF1-211ENST00000600868 GOLGA8SH3BPF8 625 aa15.05■□□□□ -0
UPF1-211ENST00000600868 ATMINO43313 823 aaPredicted RBP15.05■□□□□ -0
UPF1-211ENST00000600868 HSF2BPO75031 334 aa15.05■□□□□ -0
UPF1-211ENST00000600868 FGF19O95750 216 aa15.05■□□□□ -0
UPF1-211ENST00000600868 LTFP02788 710 aa15.05■□□□□ -0
UPF1-211ENST00000600868 KRT3P12035 628 aa15.05■□□□□ -0
UPF1-211ENST00000600868 YWHAZP63104 245 aaKnown RBP15.05■□□□□ -0
UPF1-211ENST00000600868 PABPC1LQ4VXU2 614 aaKnown RBP15.05■□□□□ -0
UPF1-211ENST00000600868 PPP1R15BQ5SWA1 713 aa15.05■□□□□ -0
UPF1-211ENST00000600868 SNX30Q5VWJ9 437 aa15.05■□□□□ -0
UPF1-211ENST00000600868 ZNF662Q6ZS27 426 aa15.05■□□□□ -0
UPF1-211ENST00000600868 BEND5Q7L4P6 421 aa15.05■□□□□ -0
UPF1-211ENST00000600868 SCD5Q86SK9 330 aa15.05■□□□□ -0
UPF1-211ENST00000600868 PHLDB2Q86SQ0 1253 aa15.05■□□□□ -0
UPF1-211ENST00000600868 HS6ST3Q8IZP7 471 aa15.05■□□□□ -0
UPF1-211ENST00000600868 ZNF276Q8N554 614 aa15.05■□□□□ -0
UPF1-211ENST00000600868 SMG7Q92540 1137 aaKnown RBP15.05■□□□□ -0
UPF1-211ENST00000600868 TRIM44Q96DX7 344 aaPredicted RBP15.05■□□□□ -0
UPF1-211ENST00000600868 PIWIL1Q96J94 861 aaKnown RBP15.05■□□□□ -0
UPF1-211ENST00000600868 CORO1BQ9BR76 489 aa15.05■□□□□ -0
UPF1-211ENST00000600868 TRIM62Q9BVG3 475 aa15.05■□□□□ -0
UPF1-211ENST00000600868 SELENOOQ9BVL4 669 aa15.05■□□□□ -0
UPF1-211ENST00000600868 IL21Q9HBE4 155 aa15.05■□□□□ -0
UPF1-211ENST00000600868 ZNF334Q9HCZ1 680 aaPredicted RBP15.05■□□□□ -0
UPF1-211ENST00000600868 ASAH2Q9NR71 780 aa15.05■□□□□ -0
UPF1-211ENST00000600868 CLDND1Q9NY35 253 aa15.05■□□□□ -0
UPF1-211ENST00000600868 GMIPQ9P107 970 aa15.05■□□□□ -0
UPF1-211ENST00000600868 CLEC1BQ9P126 229 aa15.05■□□□□ -0
UPF1-211ENST00000600868 UVRAGQ9P2Y5 699 aa15.05■□□□□ -0
UPF1-211ENST00000600868 DNMT3BQ9UBC3 853 aaKnown RBP15.05■□□□□ -0
UPF1-211ENST00000600868 CHORDC1Q9UHD1 332 aaPredicted RBP15.05■□□□□ -0
UPF1-211ENST00000600868 TMEM59LQ9UK28 342 aa15.05■□□□□ -0
UPF1-211ENST00000600868 PPP2R2CQ9Y2T4 447 aa15.05■□□□□ -0
UPF1-211ENST00000600868 MYO16Q9Y6X6 1858 aa15.04■□□□□ -0
UPF1-211ENST00000600868 A0A1W2PQH9 124 aa15.04■□□□□ -0
UPF1-211ENST00000600868 F11P03951 625 aa15.04■□□□□ -0
UPF1-211ENST00000600868 FOSL2P15408 326 aa15.04■□□□□ -0
UPF1-211ENST00000600868 CDC25CP30307 473 aa15.04■□□□□ -0
UPF1-211ENST00000600868 LTBRP36941 435 aa15.04■□□□□ -0
UPF1-211ENST00000600868 YWHAGP61981 247 aaKnown RBP eCLIP15.04■□□□□ -0
UPF1-211ENST00000600868 KIF5AQ12840 1032 aa15.04■□□□□ -0
UPF1-211ENST00000600868 TAF5Q15542 800 aa15.04■□□□□ -0
UPF1-211ENST00000600868 RARS2Q5T160 578 aaKnown RBP15.04■□□□□ -0
UPF1-211ENST00000600868 BSPRYQ5W0U4 402 aa15.04■□□□□ -0
UPF1-211ENST00000600868 TMC5Q6UXY8 1006 aa15.04■□□□□ -0
UPF1-211ENST00000600868 HFE2Q6ZVN8 426 aa15.04■□□□□ -0
UPF1-211ENST00000600868 GPR149Q86SP6 731 aa15.04■□□□□ -0
UPF1-211ENST00000600868 TMEM150AQ86TG1 271 aa15.04■□□□□ -0
UPF1-211ENST00000600868 RHOT2Q8IXI1 618 aa15.04■□□□□ -0
UPF1-211ENST00000600868 MICALL1Q8N3F8 863 aa15.04■□□□□ -0
UPF1-211ENST00000600868 FEZF2Q8TBJ5 459 aa15.04■□□□□ -0
UPF1-211ENST00000600868 RFFLQ8WZ73 363 aa15.04■□□□□ -0
UPF1-211ENST00000600868 GOLGA1Q92805 767 aa15.04■□□□□ -0
UPF1-211ENST00000600868 FAM149B1Q96BN6 582 aa15.04■□□□□ -0
UPF1-211ENST00000600868 SLC2A13Q96QE2 648 aa15.04■□□□□ -0
UPF1-211ENST00000600868 NUP85Q9BW27 656 aa15.04■□□□□ -0
UPF1-211ENST00000600868 TSGA10Q9BZW7 698 aa15.04■□□□□ -0
UPF1-211ENST00000600868 LACRTQ9GZZ8 138 aa15.04■□□□□ -0
UPF1-211ENST00000600868 ADAM7Q9H2U9 754 aa15.04■□□□□ -0
UPF1-211ENST00000600868 PIDD1Q9HB75 910 aa15.04■□□□□ -0
UPF1-211ENST00000600868 NMUR1Q9HB89 426 aa15.04■□□□□ -0
UPF1-211ENST00000600868 POPDC2Q9HBU9 364 aa15.04■□□□□ -0
UPF1-211ENST00000600868 METTL5Q9NRN9 209 aaKnown RBP15.04■□□□□ -0
UPF1-211ENST00000600868 ABCC13Q9NSE7 274 aa15.04■□□□□ -0
UPF1-211ENST00000600868 HCFC1R1Q9NWW0 138 aa15.04■□□□□ -0
UPF1-211ENST00000600868 CLIC5Q9NZA1 410 aa15.04■□□□□ -0
UPF1-211ENST00000600868 TRPM5Q9NZQ8 1165 aa15.04■□□□□ -0
UPF1-211ENST00000600868 PYCARDQ9ULZ3 195 aa15.04■□□□□ -0
UPF1-211ENST00000600868 ZNF840PA6NDX5 716 aa15.03■□□□□ -0
UPF1-211ENST00000600868 TBX10O75333 385 aa15.03■□□□□ -0
UPF1-211ENST00000600868 TADA3O75528 432 aa15.03■□□□□ -0
UPF1-211ENST00000600868 DAB1O75553 588 aa15.03■□□□□ -0
UPF1-211ENST00000600868 MTA2O94776 668 aa15.03■□□□□ -0
UPF1-211ENST00000600868 FYNP06241 537 aa15.03■□□□□ -0
UPF1-211ENST00000600868 RHOP08100 348 aa15.03■□□□□ -0
UPF1-211ENST00000600868 GABRR2P28476 465 aa15.03■□□□□ -0
UPF1-211ENST00000600868 PGFP49763 221 aa15.03■□□□□ -0
UPF1-211ENST00000600868 HADHBP55084 474 aaKnown RBP15.03■□□□□ -0
UPF1-211ENST00000600868 ITIH3Q06033 890 aa15.03■□□□□ -0
UPF1-211ENST00000600868 DLX2Q07687 328 aaPredicted RBP15.03■□□□□ -0
UPF1-211ENST00000600868 BTBD8Q5XKL5 378 aa15.03■□□□□ -0
UPF1-211ENST00000600868 DCUN1D2Q6PH85 259 aa15.03■□□□□ -0
UPF1-211ENST00000600868 GAREM2Q75VX8 874 aa15.03■□□□□ -0
UPF1-211ENST00000600868 GRASPQ7Z6J2 395 aaPredicted RBP15.03■□□□□ -0
UPF1-211ENST00000600868 SLC35G2Q8TBE7 412 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms