RNA–Protein interactions for RNA: ENST00000600528.1

COPE-210, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 261 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-210ENST00000600528 KMT5BQ4FZB7 885 aa9.98□□□□□ -0.81
COPE-210ENST00000600528 FAM26FQ5R3K3 315 aa9.98□□□□□ -0.81
COPE-210ENST00000600528 CCDC183Q5T5S1 534 aa9.98□□□□□ -0.81
COPE-210ENST00000600528 RHBDF2Q6PJF5 856 aa9.98□□□□□ -0.81
COPE-210ENST00000600528 SLC36A4Q6YBV0 504 aa9.98□□□□□ -0.81
COPE-210ENST00000600528 FILIP1Q7Z7B0 1213 aa9.98□□□□□ -0.81
COPE-210ENST00000600528 GLRX5Q86SX6 157 aa9.98□□□□□ -0.81
COPE-210ENST00000600528 OSTM1Q86WC4 334 aa9.98□□□□□ -0.81
COPE-210ENST00000600528 TTC30AQ86WT1 665 aa9.98□□□□□ -0.81
COPE-210ENST00000600528 PHTF2Q8N3S3 785 aa9.98□□□□□ -0.81
COPE-210ENST00000600528 TTC16Q8NEE8 873 aa9.98□□□□□ -0.81
COPE-210ENST00000600528 GOLGA5Q8TBA6 731 aa9.98□□□□□ -0.81
COPE-210ENST00000600528 HMGB4Q8WW32 186 aa9.98□□□□□ -0.81
COPE-210ENST00000600528 SPATA17Q96L03 361 aa9.98□□□□□ -0.81
COPE-210ENST00000600528 ZNF560Q96MR9 790 aa9.98□□□□□ -0.81
COPE-210ENST00000600528 GTPBP2Q9BX10 602 aaKnown RBP9.98□□□□□ -0.81
COPE-210ENST00000600528 GTPBP4Q9BZE4 634 aaKnown RBP9.98□□□□□ -0.81
COPE-210ENST00000600528 CCDC86Q9H6F5 360 aaKnown RBP9.98□□□□□ -0.81
COPE-210ENST00000600528 GDAP2Q9NXN4 497 aa9.98□□□□□ -0.81
COPE-210ENST00000600528 CACNA2D2Q9NY47 1150 aa9.98□□□□□ -0.81
COPE-210ENST00000600528 KIAA1522Q9P206 1035 aaPredicted RBP9.98□□□□□ -0.81
COPE-210ENST00000600528 KIAA1468Q9P260 1216 aa9.98□□□□□ -0.81
COPE-210ENST00000600528 DKK4Q9UBT3 224 aa9.98□□□□□ -0.81
COPE-210ENST00000600528 IGSF10Q6WRI0 2623 aa9.98□□□□□ -0.81
COPE-210ENST00000600528 GCN1Q92616 2671 aaKnown RBP9.98□□□□□ -0.81
COPE-210ENST00000600528 ANAPC1Q9H1A4 1944 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 TCRBV21S2A2A0A5A6 115 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 SLC9A3R1O14745 358 aaPredicted RBP9.97□□□□□ -0.81
COPE-210ENST00000600528 SH3BP5O60239 455 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 HUS1O60921 280 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 KIF20AO95235 890 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 SYPP08247 313 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 FTH1P19P0C7X4 201 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 ACAT1P24752 427 aaKnown RBP9.97□□□□□ -0.81
COPE-210ENST00000600528 ADSSP30520 456 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 MYL7Q01449 175 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 RPL6Q02878 288 aaKnown RBP9.97□□□□□ -0.81
COPE-210ENST00000600528 VSTM1Q6UX27 236 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 HS2ST1Q7LGA3 356 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 LIMS2Q7Z4I7 341 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 C12orf40Q86WS4 652 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 SPATA2LQ8IUW3 424 aaPredicted RBP9.97□□□□□ -0.81
COPE-210ENST00000600528 SLC41A1Q8IVJ1 513 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 GPD1LQ8N335 351 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 LRRC52Q8N7C0 313 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 OR2I1PQ8NGU4 316 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 ZNF507Q8TCN5 953 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 TMEM174Q8WUU8 243 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 ERCC4Q92889 916 aaPredicted RBP9.97□□□□□ -0.81
COPE-210ENST00000600528 ZNF419Q96HQ0 510 aaPredicted RBP9.97□□□□□ -0.81
COPE-210ENST00000600528 CAMK1GQ96NX5 476 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 TTLL2Q9BWV7 592 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 RNF38Q9H0F5 515 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 CD248Q9HCU0 757 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 TBC1D7Q9P0N9 293 aa9.97□□□□□ -0.81
COPE-210ENST00000600528 BCCIPQ9P287 314 aaKnown RBP eCLIP9.97□□□□□ -0.81
COPE-210ENST00000600528 R3HCC1Q9Y3T6 440 aaKnown RBP9.97□□□□□ -0.81
COPE-210ENST00000600528 SETXQ7Z333 2677 aaKnown RBP9.97□□□□□ -0.81
COPE-210ENST00000600528 PLXNB3Q9ULL4 1909 aa9.96□□□□□ -0.81
COPE-210ENST00000600528 IGHV1OR15-9A0A0B4J2B8 117 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 ZNF840PA6NDX5 716 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 ZNF233A6NK53 670 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.96□□□□□ -0.82
COPE-210ENST00000600528 TISP43B9A030 160 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 CBFA2T3O75081 653 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 OAS1P00973 400 aaKnown RBP9.96□□□□□ -0.82
COPE-210ENST00000600528 GABRG2P18507 467 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 POLR2BP30876 1174 aaKnown RBP9.96□□□□□ -0.82
COPE-210ENST00000600528 PPP3CCP48454 512 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 LHX1P48742 406 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 WNT7BP56706 349 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 USP46P62068 366 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 CCDC142Q17RM4 750 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 BMT2Q1RMZ1 405 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 SCARA3Q6AZY7 606 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 CAVIN1Q6NZI2 390 aaKnown RBP9.96□□□□□ -0.82
COPE-210ENST00000600528 RBM43Q6ZSC3 357 aaKnown RBP9.96□□□□□ -0.82
COPE-210ENST00000600528 DENND5BQ6ZUT9 1274 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 EPM2AIP1Q7L775 607 aaPredicted RBP9.96□□□□□ -0.82
COPE-210ENST00000600528 SLCO6A1Q86UG4 719 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 BRSK2Q8IWQ3 736 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 SCN4BQ8IWT1 228 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 ETFBKMTQ8IXQ9 262 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 PGBD3Q8N328 593 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 TOP6BLQ8N6T0 577 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 PNPLA1Q8N8W4 532 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 C1orf127Q8N9H9 656 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 TRIML1Q8N9V2 468 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 DUSP9Q99956 384 aaKnown RBP9.96□□□□□ -0.82
COPE-210ENST00000600528 FAM213AQ9BRX8 229 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 SLC39A2Q9NP94 309 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 ZDHHC4Q9NPG8 344 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 ARHGEF4Q9NR80 690 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 RBAKQ9NYW8 714 aaPredicted RBP9.96□□□□□ -0.82
COPE-210ENST00000600528 TRPM5Q9NZQ8 1165 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 TMEM63CQ9P1W3 806 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 MAN1B1Q9UKM7 699 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 ITGA11Q9UKX5 1188 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 HCN2Q9UL51 889 aa9.96□□□□□ -0.82
COPE-210ENST00000600528 AGAP1Q9UPQ3 857 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms