RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 GABRR2P28476 465 aa13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 PPP3CCP48454 512 aa13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 SLC6A3Q01959 620 aa13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 SLC5A9Q2M3M2 681 aa13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 PABPC1LQ4VXU2 614 aaKnown RBP13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 ATAT1Q5SQI0 421 aa13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 C10orf76Q5T2E6 689 aa13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 CES5AQ6NT32 575 aa13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 EP400NLQ6ZTU2 488 aa13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 HFE2Q6ZVN8 426 aa13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 BEND5Q7L4P6 421 aa13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 SLC26A9Q7LBE3 791 aa13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 SHKBP1Q8TBC3 707 aa13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 PPM1EQ8WY54 764 aa13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 HLA-CQ95604 372 aa13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 TCEAL4Q96EI5 215 aa13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 KCNF1Q9H3M0 494 aa13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 OSER1Q9NX31 292 aa13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 CLIC5Q9NZA1 410 aa13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 TRPM5Q9NZQ8 1165 aa13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 WDR35Q9P2L0 1181 aa13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 CHORDC1Q9UHD1 332 aaPredicted RBP13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 CD207Q9UJ71 328 aa13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 COG5Q9UP83 839 aa13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 REXO2Q9Y3B8 237 aaKnown RBP13.28□□□□□ -0.28
CHMP2A-206ENST00000600118 A0A1W2PQH9 124 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 ANKRD62A6NC57 917 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 H3BQ06 376 aaPredicted RBP13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 ZNF197O14709 1029 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 FYNP06241 537 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 PTMAP06454 111 aaKnown RBP13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 H2AFZP0C0S5 128 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 MYBL1P10243 752 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 MYL4P12829 197 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 KCNA5P22460 613 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 RRM1P23921 792 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 CDC25CP30307 473 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 MTHFRP42898 656 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 PSEN1P49768 467 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 GALCP54803 685 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 SKIV2LQ15477 1246 aaKnown RBP13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 TAF5Q15542 800 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 PPP1R15BQ5SWA1 713 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 BSPRYQ5W0U4 402 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 OR6B2Q6IFH4 312 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 PLEKHA7Q6IQ23 1121 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 TOGARAM2Q6ZUX3 1019 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 H2AFVQ71UI9 128 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 PDZD4Q76G19 769 aaPredicted RBP13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 ARCQ7LC44 396 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 ARHGAP18Q8N392 663 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 ZNF276Q8N554 614 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 C3orf20Q8ND61 904 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 MAFAQ8NHW3 353 aaPredicted RBP13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 TRIM11Q96F44 468 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 RIPOR3Q96MK2 946 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 PACSIN1Q9BY11 444 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 TLR8Q9NR97 1041 aaKnown RBP13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 TMEM59LQ9UK28 342 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 INTUQ9ULD6 942 aa13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 USP15Q9Y4E8 981 aaPredicted RBP13.27□□□□□ -0.29
CHMP2A-206ENST00000600118 A0A1W2PRU2 124 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 GRXCR2A6NFK2 248 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 SOBPA7XYQ1 873 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 CLUHO75153 1309 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 OLFM2O95897 454 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 LTFP02788 710 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 CYP1A2P05177 515 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 TMEM253P0C7T8 217 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 MAGEA1P43355 309 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 TUBP50607 506 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 YWHAGP61981 247 aaKnown RBP eCLIP13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 YWHAZP63104 245 aaKnown RBP13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 SMAD4Q13485 552 aaKnown RBP13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 SPA17Q15506 151 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 CLUL1Q15846 466 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 LEXMQ3ZCV2 418 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 EFHC1Q5JVL4 640 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 FAM102AQ5T9C2 384 aaPredicted RBP13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 POTEHQ6S545 545 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 ACRBPQ8NEB7 543 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 ITFG1Q8TB96 612 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 ZNF653Q96CK0 615 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 ARHGEF26Q96DR7 871 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 NECTIN4Q96NY8 510 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 SLC2A13Q96QE2 648 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 THAP2Q9H0W7 228 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 ATXN3LQ9H3M9 355 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 CNOT8Q9UFF9 292 aaKnown RBP13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 MRPS23Q9Y3D9 190 aaKnown RBP13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 PCDHA13Q9Y5I0 950 aa13.26□□□□□ -0.29
CHMP2A-206ENST00000600118 SIGLEC16A6NMB1 481 aa13.25□□□□□ -0.29
CHMP2A-206ENST00000600118 GOLGA8SH3BPF8 625 aa13.25□□□□□ -0.29
CHMP2A-206ENST00000600118 MBTPS2O43462 519 aa13.25□□□□□ -0.29
CHMP2A-206ENST00000600118 HSF2BPO75031 334 aa13.25□□□□□ -0.29
CHMP2A-206ENST00000600118 OAS1P00973 400 aaKnown RBP13.25□□□□□ -0.29
CHMP2A-206ENST00000600118 RARGP13631 454 aa13.25□□□□□ -0.29
CHMP2A-206ENST00000600118 GJA1P17302 382 aa13.25□□□□□ -0.29
CHMP2A-206ENST00000600118 CEBPBP17676 345 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms