RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 PI15O43692 258 aa16.01■□□□□ 0.15
LIG1-219ENST00000600055 TLR5O60602 858 aa16.01■□□□□ 0.15
LIG1-219ENST00000600055 LCP1P13796 627 aa16.01■□□□□ 0.15
LIG1-219ENST00000600055 UCHL3P15374 230 aa16.01■□□□□ 0.15
LIG1-219ENST00000600055 CLCN1P35523 988 aa16.01■□□□□ 0.15
LIG1-219ENST00000600055 SOX9P48436 509 aa16.01■□□□□ 0.15
LIG1-219ENST00000600055 STARD6P59095 220 aa16.01■□□□□ 0.15
LIG1-219ENST00000600055 UBXN1Q04323 297 aa16.01■□□□□ 0.15
LIG1-219ENST00000600055 ADIGQ0VDE8 80 aa16.01■□□□□ 0.15
LIG1-219ENST00000600055 MTF1Q14872 753 aa16.01■□□□□ 0.15
LIG1-219ENST00000600055 SYCP1Q15431 976 aa16.01■□□□□ 0.15
LIG1-219ENST00000600055 TPRG1Q6ZUI0 275 aa16.01■□□□□ 0.15
LIG1-219ENST00000600055 LUZP1Q86V48 1076 aa16.01■□□□□ 0.15
LIG1-219ENST00000600055 SUGP1Q8IWZ8 645 aaKnown RBP16.01■□□□□ 0.15
LIG1-219ENST00000600055 FAM83CQ9BQN1 747 aa16.01■□□□□ 0.15
LIG1-219ENST00000600055 FOXQ1Q9C009 403 aa16.01■□□□□ 0.15
LIG1-219ENST00000600055 LRRC4Q9HBW1 653 aa16.01■□□□□ 0.15
LIG1-219ENST00000600055 PLCB1Q9NQ66 1216 aa16.01■□□□□ 0.15
LIG1-219ENST00000600055 TRPV5Q9NQA5 729 aa16.01■□□□□ 0.15
LIG1-219ENST00000600055 FAM207AQ9NSI2 230 aaPredicted RBP16.01■□□□□ 0.15
LIG1-219ENST00000600055 GTSE1Q9NYZ3 720 aa16.01■□□□□ 0.15
LIG1-219ENST00000600055 RAPGEFL1Q9UHV5 662 aa16.01■□□□□ 0.15
LIG1-219ENST00000600055 NAGPAQ9UK23 515 aa16.01■□□□□ 0.15
LIG1-219ENST00000600055 SIK3Q9Y2K2 1263 aa16.01■□□□□ 0.15
LIG1-219ENST00000600055 MYH10P35580 1976 aa16■□□□□ 0.15
LIG1-219ENST00000600055 MDM4O15151 490 aa16■□□□□ 0.15
LIG1-219ENST00000600055 MED7O43513 233 aa16■□□□□ 0.15
LIG1-219ENST00000600055 ZBED1O96006 694 aa16■□□□□ 0.15
LIG1-219ENST00000600055 RARGP13631 454 aa16■□□□□ 0.15
LIG1-219ENST00000600055 ARSAP15289 507 aa16■□□□□ 0.15
LIG1-219ENST00000600055 TCF3P15923 654 aa16■□□□□ 0.15
LIG1-219ENST00000600055 RFX1P22670 979 aa16■□□□□ 0.15
LIG1-219ENST00000600055 GPD2P43304 727 aa16■□□□□ 0.15
LIG1-219ENST00000600055 TUBP50607 506 aa16■□□□□ 0.15
LIG1-219ENST00000600055 PRKCQQ04759 706 aa16■□□□□ 0.15
LIG1-219ENST00000600055 ASTLQ6HA08 431 aaPredicted RBP16■□□□□ 0.15
LIG1-219ENST00000600055 CC2D1AQ6P1N0 951 aaPredicted RBP16■□□□□ 0.15
LIG1-219ENST00000600055 BHLHA9Q7RTU4 235 aa16■□□□□ 0.15
LIG1-219ENST00000600055 SLC47A2Q86VL8 602 aa16■□□□□ 0.15
LIG1-219ENST00000600055 FAM71AQ8IYT1 594 aa16■□□□□ 0.15
LIG1-219ENST00000600055 TMEM105Q8N8V8 129 aa16■□□□□ 0.15
LIG1-219ENST00000600055 CSGALNACT1Q8TDX6 532 aa16■□□□□ 0.15
LIG1-219ENST00000600055 KCTD13Q8WZ19 329 aa16■□□□□ 0.15
LIG1-219ENST00000600055 WBP2Q969T9 261 aa16■□□□□ 0.15
LIG1-219ENST00000600055 ZFRQ96KR1 1074 aaKnown RBP16■□□□□ 0.15
LIG1-219ENST00000600055 LINC00597Q9H2U6 94 aa16■□□□□ 0.15
LIG1-219ENST00000600055 EBF3Q9H4W6 596 aa16■□□□□ 0.15
LIG1-219ENST00000600055 CYLDQ9NQC7 956 aa16■□□□□ 0.15
LIG1-219ENST00000600055 HPS4Q9NQG7 708 aa16■□□□□ 0.15
LIG1-219ENST00000600055 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16■□□□□ 0.15
LIG1-219ENST00000600055 CFAP97Q9P2B7 532 aa16■□□□□ 0.15
LIG1-219ENST00000600055 MTF2Q9Y483 593 aaPredicted RBP16■□□□□ 0.15
LIG1-219ENST00000600055 WNT6Q9Y6F9 365 aa16■□□□□ 0.15
LIG1-219ENST00000600055 PIAS3Q9Y6X2 628 aa16■□□□□ 0.15
LIG1-219ENST00000600055 OTOL1A6NHN0 477 aaPredicted RBP15.99■□□□□ 0.15
LIG1-219ENST00000600055 TEX33O43247 280 aa15.99■□□□□ 0.15
LIG1-219ENST00000600055 AVPR2P30518 371 aa15.99■□□□□ 0.15
LIG1-219ENST00000600055 POLR2FP61218 127 aaKnown RBP15.99■□□□□ 0.15
LIG1-219ENST00000600055 PLCB2Q00722 1185 aa15.99■□□□□ 0.15
LIG1-219ENST00000600055 PTK2Q05397 1052 aa15.99■□□□□ 0.15
LIG1-219ENST00000600055 PM20D1Q6GTS8 502 aa15.99■□□□□ 0.15
LIG1-219ENST00000600055 CLEC4CQ8WTT0 213 aa15.99■□□□□ 0.15
LIG1-219ENST00000600055 OSCP1Q8WVF1 389 aa15.99■□□□□ 0.15
LIG1-219ENST00000600055 SHDQ96IW2 340 aa15.99■□□□□ 0.15
LIG1-219ENST00000600055 PCMTD1Q96MG8 357 aaPredicted RBP15.99■□□□□ 0.15
LIG1-219ENST00000600055 DDX23Q9BUQ8 820 aaKnown RBP15.99■□□□□ 0.15
LIG1-219ENST00000600055 STK33Q9BYT3 514 aa15.99■□□□□ 0.15
LIG1-219ENST00000600055 NACA2Q9H009 215 aa15.99■□□□□ 0.15
LIG1-219ENST00000600055 NLRC4Q9NPP4 1024 aa15.99■□□□□ 0.15
LIG1-219ENST00000600055 DUS2Q9NX74 493 aaKnown RBP15.99■□□□□ 0.15
LIG1-219ENST00000600055 CYTH4Q9UIA0 394 aa15.99■□□□□ 0.15
LIG1-219ENST00000600055 KANSL1LA0AUZ9 987 aa15.98■□□□□ 0.15
LIG1-219ENST00000600055 COL4A2P08572 1712 aa15.98■□□□□ 0.15
LIG1-219ENST00000600055 IRF1P10914 325 aa15.98■□□□□ 0.15
LIG1-219ENST00000600055 AOC1P19801 751 aa15.98■□□□□ 0.15
LIG1-219ENST00000600055 ATP5C1P36542 298 aaKnown RBP15.98■□□□□ 0.15
LIG1-219ENST00000600055 CLCN5P51795 746 aa15.98■□□□□ 0.15
LIG1-219ENST00000600055 KPNA1P52294 538 aaPredicted RBP15.98■□□□□ 0.15
LIG1-219ENST00000600055 YWHAGP61981 247 aaKnown RBP eCLIP15.98■□□□□ 0.15
LIG1-219ENST00000600055 RUNX3Q13761 415 aa15.98■□□□□ 0.15
LIG1-219ENST00000600055 UBXN2BQ14CS0 331 aa15.98■□□□□ 0.15
LIG1-219ENST00000600055 C10orf120Q5SQS8 335 aa15.98■□□□□ 0.15
LIG1-219ENST00000600055 PASD1Q8IV76 773 aa15.98■□□□□ 0.15
LIG1-219ENST00000600055 SIX6OS1Q8N1H7 587 aa15.98■□□□□ 0.15
LIG1-219ENST00000600055 WDTC1Q8N5D0 677 aa15.98■□□□□ 0.15
LIG1-219ENST00000600055 HSFY1Q96LI6 401 aa15.98■□□□□ 0.15
LIG1-219ENST00000600055 NAP1L5Q96NT1 182 aaPredicted RBP15.98■□□□□ 0.15
LIG1-219ENST00000600055 ERGIC2Q96RQ1 377 aa15.98■□□□□ 0.15
LIG1-219ENST00000600055 KLF16Q9BXK1 252 aaPredicted RBP15.98■□□□□ 0.15
LIG1-219ENST00000600055 YJEFN3A6XGL0 299 aa15.97■□□□□ 0.15
LIG1-219ENST00000600055 E7ENQ6 273 aa15.97■□□□□ 0.15
LIG1-219ENST00000600055 F8VZ95 297 aa15.97■□□□□ 0.15
LIG1-219ENST00000600055 DCNP07585 359 aaKnown RBP15.97■□□□□ 0.15
LIG1-219ENST00000600055 RALAP11233 206 aa15.97■□□□□ 0.15
LIG1-219ENST00000600055 TARSP26639 723 aaKnown RBP15.97■□□□□ 0.15
LIG1-219ENST00000600055 IFNAR2P48551 515 aa15.97■□□□□ 0.15
LIG1-219ENST00000600055 PSEN1P49768 467 aa15.97■□□□□ 0.15
LIG1-219ENST00000600055 DAOAP59103 153 aa15.97■□□□□ 0.15
LIG1-219ENST00000600055 PDGFRLQ15198 375 aa15.97■□□□□ 0.15
LIG1-219ENST00000600055 EML3Q32P44 896 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms