RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 MORF4L2Q15014 288 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 NOMO1Q15155 1222 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 TUBB8Q3ZCM7 444 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 MSS51Q4VC12 460 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 PPP6R3Q5H9R7 873 aaPredicted RBP15.1■□□□□ 0.01
VRK3-217ENST00000599538 MFSD5Q6N075 450 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 TOP6BLQ8N6T0 577 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 RSAD2Q8WXG1 361 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 SENP8Q96LD8 212 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 MAK16Q9BXY0 300 aaKnown RBP15.1■□□□□ 0.01
VRK3-217ENST00000599538 ROPN1BQ9BZX4 212 aaPredicted RBP15.1■□□□□ 0.01
VRK3-217ENST00000599538 ROPN1Q9HAT0 212 aaPredicted RBP15.1■□□□□ 0.01
VRK3-217ENST00000599538 SPC25Q9HBM1 224 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 TMEM30AQ9NV96 361 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 THP07101 528 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 PRKAR2AP13861 404 aaKnown RBP15.1■□□□□ 0.01
VRK3-217ENST00000599538 ADCY1Q08828 1119 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 ADIGQ0VDE8 80 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 BOLA3Q53S33 107 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 MDH1BQ5I0G3 518 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 SYCP2LQ5T4T6 812 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 CCSAPQ6IQ19 270 aaPredicted RBP15.1■□□□□ 0.01
VRK3-217ENST00000599538 RSPH3Q86UC2 560 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 ZDHHC17Q8IUH5 632 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 CCDC13Q8IYE1 715 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 RNF169Q8NCN4 708 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 MYCBPAPQ8TBZ2 947 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 TNIP3Q96KP6 325 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 CCT8L2Q96SF2 557 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 TSPAN18Q96SJ8 248 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 TBCBQ99426 244 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 HNRNPABQ99729 332 aaKnown RBP15.1■□□□□ 0.01
VRK3-217ENST00000599538 CRTAC1Q9NQ79 661 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 TBK1Q9UHD2 729 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 PADI3Q9ULW8 664 aa15.1■□□□□ 0.01
VRK3-217ENST00000599538 I3L4J1 428 aa15.09■□□□□ 0.01
VRK3-217ENST00000599538 MCF2LO15068 1137 aa15.09■□□□□ 0.01
VRK3-217ENST00000599538 TMEM63AO94886 807 aa15.09■□□□□ 0.01
VRK3-217ENST00000599538 PAN2Q504Q3 1202 aaKnown RBP15.09■□□□□ 0.01
VRK3-217ENST00000599538 ANKRD20A8PQ5CZ79 823 aa15.09■□□□□ 0.01
VRK3-217ENST00000599538 FNBP1LQ5T0N5 605 aa15.09■□□□□ 0.01
VRK3-217ENST00000599538 CTU1Q7Z7A3 348 aaKnown RBP15.09■□□□□ 0.01
VRK3-217ENST00000599538 NLRP14Q86W24 1093 aa15.09■□□□□ 0.01
VRK3-217ENST00000599538 CCDC33Q8N5R6 958 aa15.09■□□□□ 0.01
VRK3-217ENST00000599538 CCDC185Q8N715 623 aa15.09■□□□□ 0.01
VRK3-217ENST00000599538 NAT8LQ8N9F0 302 aa15.09■□□□□ 0.01
VRK3-217ENST00000599538 KLHDC9Q8NEP7 349 aa15.09■□□□□ 0.01
VRK3-217ENST00000599538 CENPIQ92674 756 aaPredicted RBP15.09■□□□□ 0.01
VRK3-217ENST00000599538 P3H4Q92791 437 aa15.09■□□□□ 0.01
VRK3-217ENST00000599538 WDR83Q9BRX9 315 aaKnown RBP15.09■□□□□ 0.01
VRK3-217ENST00000599538 DUSP16Q9BY84 665 aa15.09■□□□□ 0.01
VRK3-217ENST00000599538 TMPRSS4Q9NRS4 437 aa15.09■□□□□ 0.01
VRK3-217ENST00000599538 TRMT13Q9NUP7 481 aaKnown RBP15.09■□□□□ 0.01
VRK3-217ENST00000599538 MTMR10Q9NXD2 777 aa15.09■□□□□ 0.01
VRK3-217ENST00000599538 DDX43Q9NXZ2 648 aaKnown RBP15.09■□□□□ 0.01
VRK3-217ENST00000599538 HEY1Q9Y5J3 304 aa15.09■□□□□ 0.01
VRK3-217ENST00000599538 XPO1O14980 1071 aaKnown RBP15.08■□□□□ 0.01
VRK3-217ENST00000599538 TRAPPC3O43617 180 aa15.08■□□□□ 0.01
VRK3-217ENST00000599538 PTPN9P43378 593 aa15.08■□□□□ 0.01
VRK3-217ENST00000599538 CACNA2D1P54289 1103 aa15.08■□□□□ 0.01
VRK3-217ENST00000599538 NKX3-2P78367 333 aa15.08■□□□□ 0.01
VRK3-217ENST00000599538 PDIA2Q13087 525 aaKnown RBP15.08■□□□□ 0.01
VRK3-217ENST00000599538 DARS2Q6PI48 645 aaKnown RBP15.08■□□□□ 0.01
VRK3-217ENST00000599538 CLEC20AQ6ZU45 233 aa15.08■□□□□ 0.01
VRK3-217ENST00000599538 ANKMY2Q8IV38 441 aa15.08■□□□□ 0.01
VRK3-217ENST00000599538 ZBED8Q8IZ13 594 aa15.08■□□□□ 0.01
VRK3-217ENST00000599538 DEFB106AQ8N104 65 aa15.08■□□□□ 0.01
VRK3-217ENST00000599538 PYROXD2Q8N2H3 581 aa15.08■□□□□ 0.01
VRK3-217ENST00000599538 TEKT4Q8WW24 435 aa15.08■□□□□ 0.01
VRK3-217ENST00000599538 HSFY1Q96LI6 401 aa15.08■□□□□ 0.01
VRK3-217ENST00000599538 SERPINB12Q96P63 405 aa15.08■□□□□ 0.01
VRK3-217ENST00000599538 SHOC2Q9UQ13 582 aa15.08■□□□□ 0.01
VRK3-217ENST00000599538 MYBPHLA2RUH7 354 aa15.08■□□□□ 0
VRK3-217ENST00000599538 PIAS1O75925 651 aa15.08■□□□□ 0
VRK3-217ENST00000599538 NPR3P17342 541 aa15.08■□□□□ 0
VRK3-217ENST00000599538 GCAP28676 217 aa15.08■□□□□ 0
VRK3-217ENST00000599538 L1CAMP32004 1257 aa15.08■□□□□ 0
VRK3-217ENST00000599538 MAP3K7CLP57077 242 aa15.08■□□□□ 0
VRK3-217ENST00000599538 PDK2Q15119 407 aa15.08■□□□□ 0
VRK3-217ENST00000599538 QPCTQ16769 361 aa15.08■□□□□ 0
VRK3-217ENST00000599538 OTUD1Q5VV17 481 aaPredicted RBP15.08■□□□□ 0
VRK3-217ENST00000599538 HFE2Q6ZVN8 426 aa15.08■□□□□ 0
VRK3-217ENST00000599538 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.08■□□□□ 0
VRK3-217ENST00000599538 ZNF473Q8WTR7 871 aaKnown RBP15.08■□□□□ 0
VRK3-217ENST00000599538 ARHGEF2Q92974 986 aaKnown RBP15.08■□□□□ 0
VRK3-217ENST00000599538 FAM149B1Q96BN6 582 aa15.08■□□□□ 0
VRK3-217ENST00000599538 FRMD8P1Q9BZ68 369 aaPredicted RBP15.08■□□□□ 0
VRK3-217ENST00000599538 DHX35Q9H5Z1 703 aaKnown RBP15.08■□□□□ 0
VRK3-217ENST00000599538 USP29Q9HBJ7 922 aa15.08■□□□□ 0
VRK3-217ENST00000599538 CWC15Q9P013 229 aaKnown RBP15.08■□□□□ 0
VRK3-217ENST00000599538 MFHAS1Q9Y4C4 1052 aa15.08■□□□□ 0
VRK3-217ENST00000599538 H7C0C1 242 aa15.07■□□□□ 0
VRK3-217ENST00000599538 MDM4O15151 490 aa15.07■□□□□ 0
VRK3-217ENST00000599538 POMCP01189 267 aa15.07■□□□□ 0
VRK3-217ENST00000599538 ATP5OP48047 213 aa15.07■□□□□ 0
VRK3-217ENST00000599538 ROR1Q01973 937 aa15.07■□□□□ 0
VRK3-217ENST00000599538 SLC10A2Q12908 348 aaPredicted RBP15.07■□□□□ 0
VRK3-217ENST00000599538 TFDP2Q14188 446 aa15.07■□□□□ 0
VRK3-217ENST00000599538 ERMARDQ5T6L9 678 aa15.07■□□□□ 0
VRK3-217ENST00000599538 SLC9A4Q6AI14 798 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms