RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 DEC1Q9P2X7 70 aa22.44■■□□□ 1.18
PNKP-212ENST00000599454 CHORDC1Q9UHD1 332 aaPredicted RBP22.44■■□□□ 1.18
PNKP-212ENST00000599454 CIZ1Q9ULV3 898 aaPredicted RBP22.44■■□□□ 1.18
PNKP-212ENST00000599454 IGF2RP11717 2491 aa22.43■■□□□ 1.18
PNKP-212ENST00000599454 PVALEFA0A1B0GWK0 134 aa22.43■■□□□ 1.18
PNKP-212ENST00000599454 TCRBV21S2A2A0A5A6 115 aa22.43■■□□□ 1.18
PNKP-212ENST00000599454 TBC1D3BA6NDS4 549 aa22.43■■□□□ 1.18
PNKP-212ENST00000599454 ZDHHC11BP0C7U3 371 aa22.43■■□□□ 1.18
PNKP-212ENST00000599454 SLC5A3P53794 718 aa22.43■■□□□ 1.18
PNKP-212ENST00000599454 FOXC1Q12948 553 aa22.43■■□□□ 1.18
PNKP-212ENST00000599454 BIRC3Q13489 604 aa22.43■■□□□ 1.18
PNKP-212ENST00000599454 KNOP1Q1ED39 458 aaKnown RBP22.43■■□□□ 1.18
PNKP-212ENST00000599454 ZNF699Q32M78 642 aa22.43■■□□□ 1.18
PNKP-212ENST00000599454 SHC4Q6S5L8 630 aa22.43■■□□□ 1.18
PNKP-212ENST00000599454 UNQ6494/PRO21346Q6UXR6 183 aa22.43■■□□□ 1.18
PNKP-212ENST00000599454 PGBD3Q8N328 593 aa22.43■■□□□ 1.18
PNKP-212ENST00000599454 SCAMP5Q8TAC9 235 aa22.43■■□□□ 1.18
PNKP-212ENST00000599454 TFIP11Q9UBB9 837 aaKnown RBP22.43■■□□□ 1.18
PNKP-212ENST00000599454 MBD1Q9UIS9 605 aaPredicted RBP22.43■■□□□ 1.18
PNKP-212ENST00000599454 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.42■■□□□ 1.18
PNKP-212ENST00000599454 TULP3O75386 442 aa22.42■■□□□ 1.18
PNKP-212ENST00000599454 P4HA1P13674 534 aa22.42■■□□□ 1.18
PNKP-212ENST00000599454 CLDN10P78369 228 aa22.42■■□□□ 1.18
PNKP-212ENST00000599454 UAP1L1Q3KQV9 507 aa22.42■■□□□ 1.18
PNKP-212ENST00000599454 LYSMD4Q5XG99 296 aa22.42■■□□□ 1.18
PNKP-212ENST00000599454 SLC23A3Q6PIS1 610 aa22.42■■□□□ 1.18
PNKP-212ENST00000599454 PAQR9Q6ZVX9 377 aa22.42■■□□□ 1.18
PNKP-212ENST00000599454 TMEFF1Q8IYR6 380 aa22.42■■□□□ 1.18
PNKP-212ENST00000599454 ZNF513Q8N8E2 541 aaPredicted RBP22.42■■□□□ 1.18
PNKP-212ENST00000599454 NACA2Q9H009 215 aa22.42■■□□□ 1.18
PNKP-212ENST00000599454 CCSER2Q9H7U1 834 aa22.42■■□□□ 1.18
PNKP-212ENST00000599454 SPHK2Q9NRA0 654 aa22.42■■□□□ 1.18
PNKP-212ENST00000599454 WASF3Q9UPY6 502 aa22.42■■□□□ 1.18
PNKP-212ENST00000599454 POLR2DO15514 142 aaKnown RBP22.41■■□□□ 1.18
PNKP-212ENST00000599454 AP5Z1O43299 807 aa22.41■■□□□ 1.18
PNKP-212ENST00000599454 AP1G2O75843 785 aa22.41■■□□□ 1.18
PNKP-212ENST00000599454 CLSTN1O94985 981 aa22.41■■□□□ 1.18
PNKP-212ENST00000599454 PTGER3P43115 390 aa22.41■■□□□ 1.18
PNKP-212ENST00000599454 CDH8P55286 799 aa22.41■■□□□ 1.18
PNKP-212ENST00000599454 NCOA4Q13772 614 aa22.41■■□□□ 1.18
PNKP-212ENST00000599454 PEAR1Q5VY43 1037 aaPredicted RBP22.41■■□□□ 1.18
PNKP-212ENST00000599454 SLC36A4Q6YBV0 504 aa22.41■■□□□ 1.18
PNKP-212ENST00000599454 BBS7Q8IWZ6 715 aa22.41■■□□□ 1.18
PNKP-212ENST00000599454 TERB1Q8NA31 727 aa22.41■■□□□ 1.18
PNKP-212ENST00000599454 PARD3BQ8TEW8 1205 aa22.41■■□□□ 1.18
PNKP-212ENST00000599454 FBXO44Q9H4M3 255 aa22.41■■□□□ 1.18
PNKP-212ENST00000599454 SLC32A1Q9H598 525 aa22.41■■□□□ 1.18
PNKP-212ENST00000599454 SLC39A2Q9NP94 309 aa22.41■■□□□ 1.18
PNKP-212ENST00000599454 KRT82Q9NSB4 513 aa22.41■■□□□ 1.18
PNKP-212ENST00000599454 FOXD4L1Q9NU39 408 aa22.41■■□□□ 1.18
PNKP-212ENST00000599454 GMIPQ9P107 970 aa22.41■■□□□ 1.18
PNKP-212ENST00000599454 STARD13Q9Y3M8 1113 aa22.41■■□□□ 1.18
PNKP-212ENST00000599454 CFAP47Q6ZTR5 3102 aa22.4■■□□□ 1.18
PNKP-212ENST00000599454 TMEM8BA6NDV4 472 aa22.4■■□□□ 1.18
PNKP-212ENST00000599454 K7ELQ4 463 aaPredicted RBP22.4■■□□□ 1.18
PNKP-212ENST00000599454 CASP4P49662 377 aa22.4■■□□□ 1.18
PNKP-212ENST00000599454 ANO4Q32M45 955 aa22.4■■□□□ 1.18
PNKP-212ENST00000599454 ARMCX6Q7L4S7 300 aa22.4■■□□□ 1.18
PNKP-212ENST00000599454 RABEPKQ7Z6M1 372 aa22.4■■□□□ 1.18
PNKP-212ENST00000599454 FUKQ8N0W3 1084 aa22.4■■□□□ 1.18
PNKP-212ENST00000599454 NAT16Q8N8M0 369 aa22.4■■□□□ 1.18
PNKP-212ENST00000599454 CEP76Q8TAP6 659 aa22.4■■□□□ 1.18
PNKP-212ENST00000599454 TMEM174Q8WUU8 243 aa22.4■■□□□ 1.18
PNKP-212ENST00000599454 BLZF1Q9H2G9 400 aa22.4■■□□□ 1.18
PNKP-212ENST00000599454 TMEM74BQ9NUR3 256 aa22.4■■□□□ 1.18
PNKP-212ENST00000599454 FAM13BQ9NYF5 915 aa22.4■■□□□ 1.18
PNKP-212ENST00000599454 PILRBQ9UKJ0 227 aa22.4■■□□□ 1.18
PNKP-212ENST00000599454 CACNA1GO43497 2377 aa22.39■■□□□ 1.18
PNKP-212ENST00000599454 LRRIQ3A6PVS8 624 aaPredicted RBP22.39■■□□□ 1.17
PNKP-212ENST00000599454 C1QTNF9BB2RNN3 333 aa22.39■■□□□ 1.17
PNKP-212ENST00000599454 ZBTB24O43167 697 aaPredicted RBP22.39■■□□□ 1.17
PNKP-212ENST00000599454 TLR5O60602 858 aa22.39■■□□□ 1.17
PNKP-212ENST00000599454 C4BPAP04003 597 aaKnown RBP22.39■■□□□ 1.17
PNKP-212ENST00000599454 C1QTNF9P0C862 333 aa22.39■■□□□ 1.17
PNKP-212ENST00000599454 PDIA4P13667 645 aaKnown RBP22.39■■□□□ 1.17
PNKP-212ENST00000599454 ENGP17813 658 aa22.39■■□□□ 1.17
PNKP-212ENST00000599454 TRIM21P19474 475 aaKnown RBP22.39■■□□□ 1.17
PNKP-212ENST00000599454 NTSR1P30989 418 aa22.39■■□□□ 1.17
PNKP-212ENST00000599454 GOLGA8FQ08AF8 430 aa22.39■■□□□ 1.17
PNKP-212ENST00000599454 GOLGA8DPQ0D2H9 430 aa22.39■■□□□ 1.17
PNKP-212ENST00000599454 C10orf76Q5T2E6 689 aa22.39■■□□□ 1.17
PNKP-212ENST00000599454 HTR3DQ70Z44 454 aa22.39■■□□□ 1.17
PNKP-212ENST00000599454 ACOT1Q86TX2 421 aa22.39■■□□□ 1.17
PNKP-212ENST00000599454 UNC93AQ86WB7 457 aa22.39■■□□□ 1.17
PNKP-212ENST00000599454 TMEM25Q86YD3 366 aa22.39■■□□□ 1.17
PNKP-212ENST00000599454 SLC9A9Q8IVB4 645 aa22.39■■□□□ 1.17
PNKP-212ENST00000599454 FRMD1Q8N878 549 aa22.39■■□□□ 1.17
PNKP-212ENST00000599454 KDF1Q8NAX2 398 aaPredicted RBP22.39■■□□□ 1.17
PNKP-212ENST00000599454 PLEKHO2Q8TD55 490 aa22.39■■□□□ 1.17
PNKP-212ENST00000599454 TAF4BQ92750 862 aa22.39■■□□□ 1.17
PNKP-212ENST00000599454 ADAM33Q9BZ11 813 aa22.39■■□□□ 1.17
PNKP-212ENST00000599454 CSNK1G1Q9HCP0 422 aa22.39■■□□□ 1.17
PNKP-212ENST00000599454 ZDHHC4Q9NPG8 344 aa22.39■■□□□ 1.17
PNKP-212ENST00000599454 TLR8Q9NR97 1041 aaKnown RBP22.39■■□□□ 1.17
PNKP-212ENST00000599454 PCDH15Q96QU1 1955 aa22.39■■□□□ 1.17
PNKP-212ENST00000599454 FRYQ5TBA9 3013 aa22.38■■□□□ 1.17
PNKP-212ENST00000599454 UPK3BL1B0FP48 263 aa22.38■■□□□ 1.17
PNKP-212ENST00000599454 UPK3BL2E5RIL1 263 aa22.38■■□□□ 1.17
PNKP-212ENST00000599454 RPN1P04843 607 aaKnown RBP22.38■■□□□ 1.17
PNKP-212ENST00000599454 HOXB2P14652 356 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms