RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 CLSTN1O94985 981 aa15.56■□□□□ 0.08
IRF3-223ENST00000599223 RTN3O95197 1032 aaPredicted RBP15.56■□□□□ 0.08
IRF3-223ENST00000599223 KCNK5O95279 499 aa15.56■□□□□ 0.08
IRF3-223ENST00000599223 ADH1CP00326 375 aa15.56■□□□□ 0.08
IRF3-223ENST00000599223 ZDHHC11BP0C7U3 371 aa15.56■□□□□ 0.08
IRF3-223ENST00000599223 EIF2DP41214 584 aaKnown RBP15.56■□□□□ 0.08
IRF3-223ENST00000599223 MRPS21P82921 87 aaKnown RBP15.56■□□□□ 0.08
IRF3-223ENST00000599223 USP39Q53GS9 565 aaKnown RBP15.56■□□□□ 0.08
IRF3-223ENST00000599223 ZNF667Q5HYK9 610 aa15.56■□□□□ 0.08
IRF3-223ENST00000599223 C1orf220Q5T0J3 134 aa15.56■□□□□ 0.08
IRF3-223ENST00000599223 SPOPLQ6IQ16 392 aa15.56■□□□□ 0.08
IRF3-223ENST00000599223 GPRIN1Q7Z2K8 1008 aa15.56■□□□□ 0.08
IRF3-223ENST00000599223 PDZD8Q8NEN9 1154 aa15.56■□□□□ 0.08
IRF3-223ENST00000599223 OVCA2Q8WZ82 227 aa15.56■□□□□ 0.08
IRF3-223ENST00000599223 SMOQ99835 787 aa15.56■□□□□ 0.08
IRF3-223ENST00000599223 MED10Q9BTT4 135 aa15.56■□□□□ 0.08
IRF3-223ENST00000599223 KCTD10Q9H3F6 313 aa15.56■□□□□ 0.08
IRF3-223ENST00000599223 ARHGEF4Q9NR80 690 aa15.56■□□□□ 0.08
IRF3-223ENST00000599223 CGNQ9P2M7 1197 aaKnown RBP15.56■□□□□ 0.08
IRF3-223ENST00000599223 CHORDC1Q9UHD1 332 aaPredicted RBP15.56■□□□□ 0.08
IRF3-223ENST00000599223 MBD1Q9UIS9 605 aaPredicted RBP15.56■□□□□ 0.08
IRF3-223ENST00000599223 ZZEF1O43149 2961 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 CACNA1EQ15878 2313 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 PCDH15Q96QU1 1955 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 E2F8A0AVK6 867 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 TRIM24O15164 1050 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 AP1G2O75843 785 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 APODP05090 189 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 IRF1P10914 325 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 ASPAP45381 313 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 TUBP50607 506 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 SHC2P98077 582 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 DNM1Q05193 864 aaKnown RBP15.55■□□□□ 0.08
IRF3-223ENST00000599223 ZACNQ401N2 412 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 KMT5BQ4FZB7 885 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 HECTD3Q5T447 861 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 SNX30Q5VWJ9 437 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 ARMCX6Q7L4S7 300 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 CYP2U1Q7Z449 544 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 DDX42Q86XP3 938 aaKnown RBP eCLIP15.55■□□□□ 0.08
IRF3-223ENST00000599223 MIB1Q86YT6 1006 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 NAT16Q8N8M0 369 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 CCDC26Q8TAB7 109 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 SLC2A14Q8TDB8 520 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 TWNKQ96RR1 684 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.55■□□□□ 0.083e-7■■■■■ 53.4
IRF3-223ENST00000599223 FAM49BQ9NUQ9 324 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 FAM13BQ9NYF5 915 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 CHMP5Q9NZZ3 219 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 ANGPTL2Q9UKU9 493 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 CIZ1Q9ULV3 898 aaPredicted RBP15.55■□□□□ 0.08
IRF3-223ENST00000599223 AKAP13Q12802 2813 aa15.55■□□□□ 0.08
IRF3-223ENST00000599223 ATP8B3O60423 1300 aa15.54■□□□□ 0.08
IRF3-223ENST00000599223 ATXN2Q99700 1313 aaKnown RBP15.54■□□□□ 0.08
IRF3-223ENST00000599223 A0A0A0MRY4 1105 aa15.54■□□□□ 0.08
IRF3-223ENST00000599223 HOXC11O43248 304 aaPredicted RBP15.54■□□□□ 0.08
IRF3-223ENST00000599223 GREM1O60565 184 aa15.54■□□□□ 0.08
IRF3-223ENST00000599223 TULP3O75386 442 aa15.54■□□□□ 0.08
IRF3-223ENST00000599223 NR3C1P04150 777 aa15.54■□□□□ 0.08
IRF3-223ENST00000599223 P2RY2P41231 377 aa15.54■□□□□ 0.08
IRF3-223ENST00000599223 GRIA2P42262 883 aa15.54■□□□□ 0.08
IRF3-223ENST00000599223 PTGER3P43115 390 aa15.54■□□□□ 0.08
IRF3-223ENST00000599223 DHPSP49366 369 aaPredicted RBP15.54■□□□□ 0.08
IRF3-223ENST00000599223 NDST1P52848 882 aa15.54■□□□□ 0.08
IRF3-223ENST00000599223 MAP7D1Q3KQU3 841 aa15.54■□□□□ 0.08
IRF3-223ENST00000599223 TMEM25Q86YD3 366 aa15.54■□□□□ 0.08
IRF3-223ENST00000599223 C12orf29Q8N999 325 aa15.54■□□□□ 0.08
IRF3-223ENST00000599223 GOLGA5Q8TBA6 731 aa15.54■□□□□ 0.08
IRF3-223ENST00000599223 HMGB4Q8WW32 186 aa15.54■□□□□ 0.08
IRF3-223ENST00000599223 PAGE5Q96GU1 130 aa15.54■□□□□ 0.08
IRF3-223ENST00000599223 OSER1Q9NX31 292 aa15.54■□□□□ 0.08
IRF3-223ENST00000599223 TBC1D14Q9P2M4 693 aa15.54■□□□□ 0.08
IRF3-223ENST00000599223 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.53■□□□□ 0.08
IRF3-223ENST00000599223 TCRBV21S2A2A0A5A6 115 aa15.53■□□□□ 0.08
IRF3-223ENST00000599223 CDX4O14627 284 aaPredicted RBP15.53■□□□□ 0.08
IRF3-223ENST00000599223 CYP26A1O43174 497 aa15.53■□□□□ 0.08
IRF3-223ENST00000599223 TLR5O60602 858 aa15.53■□□□□ 0.08
IRF3-223ENST00000599223 TBX18O95935 607 aa15.53■□□□□ 0.08
IRF3-223ENST00000599223 ASS1P00966 412 aaKnown RBP15.53■□□□□ 0.08
IRF3-223ENST00000599223 SLFN14P0C7P3 912 aa15.53■□□□□ 0.08
IRF3-223ENST00000599223 NOVA1P51513 510 aaKnown RBP15.53■□□□□ 0.08
IRF3-223ENST00000599223 MAP3K7CLP57077 242 aa15.53■□□□□ 0.08
IRF3-223ENST00000599223 IRX4P78413 519 aa15.53■□□□□ 0.08
IRF3-223ENST00000599223 SV2AQ7L0J3 742 aa15.53■□□□□ 0.08
IRF3-223ENST00000599223 C11orf74Q86VG3 221 aa15.53■□□□□ 0.08
IRF3-223ENST00000599223 SLC9A9Q8IVB4 645 aa15.53■□□□□ 0.08
IRF3-223ENST00000599223 TMEFF1Q8IYR6 380 aa15.53■□□□□ 0.08
IRF3-223ENST00000599223 WHAMMQ8TF30 809 aa15.53■□□□□ 0.08
IRF3-223ENST00000599223 TMEM174Q8WUU8 243 aa15.53■□□□□ 0.08
IRF3-223ENST00000599223 PIGKQ92643 395 aa15.53■□□□□ 0.08
IRF3-223ENST00000599223 JAKMIP2Q96AA8 810 aa15.53■□□□□ 0.08
IRF3-223ENST00000599223 P2RY11Q96G91 374 aa15.53■□□□□ 0.08
IRF3-223ENST00000599223 TNIP3Q96KP6 325 aa15.53■□□□□ 0.08
IRF3-223ENST00000599223 CSNK1G1Q9HCP0 422 aa15.53■□□□□ 0.08
IRF3-223ENST00000599223 EXOC1Q9NV70 894 aa15.53■□□□□ 0.08
IRF3-223ENST00000599223 SH3BP1Q9Y3L3 701 aa15.53■□□□□ 0.08
IRF3-223ENST00000599223 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.52■□□□□ 0.08
IRF3-223ENST00000599223 HHLA1C9JL84 531 aa15.52■□□□□ 0.08
IRF3-223ENST00000599223 KHNYNO15037 678 aaKnown RBP15.52■□□□□ 0.08
IRF3-223ENST00000599223 HLA-DRAP01903 254 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms