RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 ADH1CP00326 375 aa17.49■□□□□ 0.39
SHKBP1-215ENST00000597649 TNNC2P02585 160 aa17.49■□□□□ 0.39
SHKBP1-215ENST00000597649 CAPNS1P04632 268 aa17.49■□□□□ 0.39
SHKBP1-215ENST00000597649 CFIP05156 583 aa17.49■□□□□ 0.39
SHKBP1-215ENST00000597649 ALCAMQ13740 583 aa17.49■□□□□ 0.39
SHKBP1-215ENST00000597649 TDRD10Q5VZ19 366 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-215ENST00000597649 SHC4Q6S5L8 630 aa17.49■□□□□ 0.39
SHKBP1-215ENST00000597649 HS2ST1Q7LGA3 356 aa17.49■□□□□ 0.39
SHKBP1-215ENST00000597649 MIB1Q86YT6 1006 aa17.49■□□□□ 0.39
SHKBP1-215ENST00000597649 OR2I1PQ8NGU4 316 aa17.49■□□□□ 0.39
SHKBP1-215ENST00000597649 B3GNT5Q9BYG0 378 aa17.49■□□□□ 0.39
SHKBP1-215ENST00000597649 CAPN10Q9HC96 672 aa17.49■□□□□ 0.39
SHKBP1-215ENST00000597649 EHD2Q9NZN4 543 aa17.49■□□□□ 0.39
SHKBP1-215ENST00000597649 CHORDC1Q9UHD1 332 aaPredicted RBP17.49■□□□□ 0.39
SHKBP1-215ENST00000597649 R3HCC1Q9Y3T6 440 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-215ENST00000597649 E2F8A0AVK6 867 aa17.48■□□□□ 0.39
SHKBP1-215ENST00000597649 FAM221BA6H8Z2 402 aa17.48■□□□□ 0.39
SHKBP1-215ENST00000597649 TBC1D3BA6NDS4 549 aa17.48■□□□□ 0.39
SHKBP1-215ENST00000597649 GOLGA6L22H0YM25 854 aa17.48■□□□□ 0.39
SHKBP1-215ENST00000597649 COCHO43405 550 aa17.48■□□□□ 0.39
SHKBP1-215ENST00000597649 TACC1O75410 805 aa17.48■□□□□ 0.39
SHKBP1-215ENST00000597649 GABRG2P18507 467 aa17.48■□□□□ 0.39
SHKBP1-215ENST00000597649 CMA1P23946 247 aa17.48■□□□□ 0.39
SHKBP1-215ENST00000597649 IFRD2Q12894 506 aaPredicted RBP17.48■□□□□ 0.39
SHKBP1-215ENST00000597649 RESP18Q5W5W9 173 aa17.48■□□□□ 0.39
SHKBP1-215ENST00000597649 CCDC73Q6ZRK6 1079 aa17.48■□□□□ 0.39
SHKBP1-215ENST00000597649 TMEM25Q86YD3 366 aa17.48■□□□□ 0.39
SHKBP1-215ENST00000597649 CHCHD4Q8N4Q1 142 aa17.48■□□□□ 0.39
SHKBP1-215ENST00000597649 OR6B3Q8NGW1 331 aa17.48■□□□□ 0.39
SHKBP1-215ENST00000597649 GTPBP2Q9BX10 602 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-215ENST00000597649 SNX25Q9H3E2 840 aa17.48■□□□□ 0.39
SHKBP1-215ENST00000597649 CD248Q9HCU0 757 aa17.48■□□□□ 0.39
SHKBP1-215ENST00000597649 HSPBP1Q9NZL4 362 aa17.48■□□□□ 0.39
SHKBP1-215ENST00000597649 SLC6A14Q9UN76 642 aa17.48■□□□□ 0.39
SHKBP1-215ENST00000597649 A0A1W2PQ27 194 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 A0A1W2PQ64 194 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 A0A1W2PQD8 194 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 A0A1W2PQF6 199 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 TULP3O75386 442 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 SERPINF2P08697 491 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 CD59P13987 128 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 YWHAQP27348 245 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 WASP42768 502 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 PGFP49763 221 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 RPL6Q02878 288 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 GAD2Q05329 585 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 BYSLQ13895 437 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 DUOXA1Q1HG43 343 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 CLEC17AQ6ZS10 378 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 WDR49Q8IV35 697 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 BBS7Q8IWZ6 715 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 NUP93Q8N1F7 819 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 PDILTQ8N807 584 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 RDH13Q8NBN7 331 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 SCAMP5Q8TAC9 235 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 ZNF516Q92618 1163 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 SLITRK1Q96PX8 696 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 KCNK16Q96T55 309 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 GZF1Q9H116 711 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 TBC1D14Q9P2M4 693 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 LHX6Q9UPM6 363 aa17.47■□□□□ 0.39
SHKBP1-215ENST00000597649 KIAA0391O15091 583 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-215ENST00000597649 HOXC11O43248 304 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-215ENST00000597649 AP5Z1O43299 807 aa17.46■□□□□ 0.39
SHKBP1-215ENST00000597649 HOXD12P35452 270 aa17.46■□□□□ 0.39
SHKBP1-215ENST00000597649 STAT6P42226 847 aa17.46■□□□□ 0.39
SHKBP1-215ENST00000597649 GFPT1Q06210 699 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-215ENST00000597649 SURF1Q15526 300 aa17.46■□□□□ 0.39
SHKBP1-215ENST00000597649 WDR72Q3MJ13 1102 aa17.46■□□□□ 0.39
SHKBP1-215ENST00000597649 PAQR9Q6ZVX9 377 aa17.46■□□□□ 0.39
SHKBP1-215ENST00000597649 DDX42Q86XP3 938 aaKnown RBP eCLIP17.46■□□□□ 0.39
SHKBP1-215ENST00000597649 SLC41A1Q8IVJ1 513 aa17.46■□□□□ 0.39
SHKBP1-215ENST00000597649 ZNF513Q8N8E2 541 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-215ENST00000597649 CEP76Q8TAP6 659 aa17.46■□□□□ 0.39
SHKBP1-215ENST00000597649 KCNV2Q8TDN2 545 aa17.46■□□□□ 0.39
SHKBP1-215ENST00000597649 ERLEC1Q96DZ1 483 aa17.46■□□□□ 0.39
SHKBP1-215ENST00000597649 CAMK1GQ96NX5 476 aa17.46■□□□□ 0.39
SHKBP1-215ENST00000597649 ACOX2Q99424 681 aa17.46■□□□□ 0.39
SHKBP1-215ENST00000597649 CCSER2Q9H7U1 834 aa17.46■□□□□ 0.39
SHKBP1-215ENST00000597649 CALCOCO1Q9P1Z2 691 aa17.46■□□□□ 0.39
SHKBP1-215ENST00000597649 ADAMTS9Q9P2N4 1935 aa17.45■□□□□ 0.38
SHKBP1-215ENST00000597649 IGHV1OR15-9A0A0B4J2B8 117 aa17.45■□□□□ 0.38
SHKBP1-215ENST00000597649 A0A1B0GVL5 298 aa17.45■□□□□ 0.38
SHKBP1-215ENST00000597649 TGFB1I1O43294 461 aa17.45■□□□□ 0.38
SHKBP1-215ENST00000597649 GREM1O60565 184 aa17.45■□□□□ 0.38
SHKBP1-215ENST00000597649 FAM163BP0C2L3 166 aa17.45■□□□□ 0.38
SHKBP1-215ENST00000597649 DLATP10515 647 aaKnown RBP17.45■□□□□ 0.38
SHKBP1-215ENST00000597649 ZNF33AQ06730 810 aa17.45■□□□□ 0.38
SHKBP1-215ENST00000597649 SNX30Q5VWJ9 437 aa17.45■□□□□ 0.38
SHKBP1-215ENST00000597649 HDDC3Q8N4P3 179 aa17.45■□□□□ 0.38
SHKBP1-215ENST00000597649 MINDY1Q8N5J2 469 aa17.45■□□□□ 0.38
SHKBP1-215ENST00000597649 IQUBQ8NA54 791 aa17.45■□□□□ 0.38
SHKBP1-215ENST00000597649 B3GALNT2Q8NCR0 500 aa17.45■□□□□ 0.38
SHKBP1-215ENST00000597649 FBXO32Q969P5 355 aa17.45■□□□□ 0.38
SHKBP1-215ENST00000597649 OTUB2Q96DC9 234 aa17.45■□□□□ 0.38
SHKBP1-215ENST00000597649 ELOVL4Q9GZR5 314 aa17.45■□□□□ 0.38
SHKBP1-215ENST00000597649 XYLT2Q9H1B5 865 aa17.45■□□□□ 0.38
SHKBP1-215ENST00000597649 SPHK2Q9NRA0 654 aa17.45■□□□□ 0.38
SHKBP1-215ENST00000597649 IL37Q9NZH6 218 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms