RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 PLCD3Q8N3E9 789 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 MAB21L3Q8N8X9 362 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 NDRG1Q92597 394 aaKnown RBP15.79■□□□□ 0.12
TRIM28-207ENST00000597136 CEP295NLQ96MC4 621 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 SLC22A12Q96S37 553 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 SPTLC3Q9NUV7 552 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 SEPT11Q9NVA2 429 aaKnown RBP15.79■□□□□ 0.12
TRIM28-207ENST00000597136 HESX1Q9UBX0 185 aa15.79■□□□□ 0.12
TRIM28-207ENST00000597136 C2orf78A6NCI8 922 aa15.78■□□□□ 0.12
TRIM28-207ENST00000597136 PIK3R2O00459 728 aa15.78■□□□□ 0.12
TRIM28-207ENST00000597136 RTN3O95197 1032 aaPredicted RBP15.78■□□□□ 0.12
TRIM28-207ENST00000597136 NDUFA10O95299 355 aa15.78■□□□□ 0.12
TRIM28-207ENST00000597136 CDC25CP30307 473 aa15.78■□□□□ 0.12
TRIM28-207ENST00000597136 RGS7P49802 495 aa15.78■□□□□ 0.12
TRIM28-207ENST00000597136 GFPT1Q06210 699 aaPredicted RBP15.78■□□□□ 0.12
TRIM28-207ENST00000597136 BST2Q10589 180 aaKnown RBP15.78■□□□□ 0.12
TRIM28-207ENST00000597136 TANGO2Q6ICL3 276 aa15.78■□□□□ 0.12
TRIM28-207ENST00000597136 PMF1Q6P1K2 205 aa15.78■□□□□ 0.12
TRIM28-207ENST00000597136 SLC35F5Q8WV83 523 aa15.78■□□□□ 0.12
TRIM28-207ENST00000597136 SECISBP2LQ93073 1101 aaKnown RBP15.78■□□□□ 0.12
TRIM28-207ENST00000597136 TRIM44Q96DX7 344 aaPredicted RBP15.78■□□□□ 0.12
TRIM28-207ENST00000597136 PLA2G2FQ9BZM2 168 aa15.78■□□□□ 0.12
TRIM28-207ENST00000597136 SMG9Q9H0W8 520 aaKnown RBP15.78■□□□□ 0.12
TRIM28-207ENST00000597136 LHX5Q9H2C1 402 aa15.78■□□□□ 0.12
TRIM28-207ENST00000597136 PDCL3Q9H2J4 239 aa15.78■□□□□ 0.12
TRIM28-207ENST00000597136 SMOC2Q9H3U7 446 aa15.78■□□□□ 0.12
TRIM28-207ENST00000597136 SLITRK6Q9H5Y7 841 aa15.78■□□□□ 0.12
TRIM28-207ENST00000597136 KCNK12Q9HB15 430 aa15.78■□□□□ 0.12
TRIM28-207ENST00000597136 GDE1Q9NZC3 331 aa15.78■□□□□ 0.12
TRIM28-207ENST00000597136 UXTQ9UBK9 157 aaPredicted RBP15.78■□□□□ 0.12
TRIM28-207ENST00000597136 CYTH4Q9UIA0 394 aa15.78■□□□□ 0.12
TRIM28-207ENST00000597136 NCANO14594 1321 aa15.77■□□□□ 0.12
TRIM28-207ENST00000597136 FAM170AA1A519 330 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 FAM92AA1XBS5 289 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 EIF3CLB5ME19 914 aaKnown RBP15.77■□□□□ 0.11
TRIM28-207ENST00000597136 M0QYV0 167 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 ZNF263O14978 683 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 LCA5LO95447 670 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 FGF19O95750 216 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 ABL1P00519 1130 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 VIPR2P41587 438 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 GPD2P43304 727 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 BCAT1P54687 386 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 HTR4Q13639 388 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 CLEC16AQ2KHT3 1053 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 TRIM72Q6ZMU5 477 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 TOGARAM2Q6ZUX3 1019 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 PASD1Q8IV76 773 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 WDTC1Q8N5D0 677 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 ZSCAN18Q8TBC5 510 aaPredicted RBP15.77■□□□□ 0.11
TRIM28-207ENST00000597136 FBXO32Q969P5 355 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 RSPRY1Q96DX4 576 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 ASB16Q96NS5 453 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 EIF3CQ99613 913 aaKnown RBP15.77■□□□□ 0.11
TRIM28-207ENST00000597136 KXD1Q9BQD3 176 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 UBXN6Q9BZV1 441 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 GMIPQ9P107 970 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 NAGPAQ9UK23 515 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 NENFQ9UMX5 172 aa15.77■□□□□ 0.11
TRIM28-207ENST00000597136 ZFP37Q9Y6Q3 630 aaPredicted RBP15.77■□□□□ 0.11
TRIM28-207ENST00000597136 MYO18AQ92614 2054 aaKnown RBP15.76■□□□□ 0.11
TRIM28-207ENST00000597136 ZNF840PA6NDX5 716 aa15.76■□□□□ 0.11
TRIM28-207ENST00000597136 ANHXE9PGG2 379 aa15.76■□□□□ 0.11
TRIM28-207ENST00000597136 XPO1O14980 1071 aaKnown RBP15.76■□□□□ 0.11
TRIM28-207ENST00000597136 LSM8O95777 96 aaKnown RBP15.76■□□□□ 0.11
TRIM28-207ENST00000597136 CYP1A1P04798 512 aaPredicted RBP15.76■□□□□ 0.11
TRIM28-207ENST00000597136 USP17L7P0C7H9 530 aa15.76■□□□□ 0.11
TRIM28-207ENST00000597136 GZMAP12544 262 aa15.76■□□□□ 0.11
TRIM28-207ENST00000597136 FCARP24071 287 aa15.76■□□□□ 0.11
TRIM28-207ENST00000597136 RAB41Q5JT25 222 aa15.76■□□□□ 0.11
TRIM28-207ENST00000597136 ALKBH5Q6P6C2 394 aaKnown RBP15.76■□□□□ 0.11
TRIM28-207ENST00000597136 ARID3BQ8IVW6 561 aaPredicted RBP15.76■□□□□ 0.11
TRIM28-207ENST00000597136 MRPS31Q92665 395 aaKnown RBP15.76■□□□□ 0.11
TRIM28-207ENST00000597136 RNF38Q9H0F5 515 aa15.76■□□□□ 0.11
TRIM28-207ENST00000597136 TASP1Q9H6P5 420 aa15.76■□□□□ 0.11
TRIM28-207ENST00000597136 NMUR1Q9HB89 426 aa15.76■□□□□ 0.11
TRIM28-207ENST00000597136 PNPLA8Q9NP80 782 aa15.76■□□□□ 0.11
TRIM28-207ENST00000597136 OSER1Q9NX31 292 aa15.76■□□□□ 0.11
TRIM28-207ENST00000597136 TAS2R14Q9NYV8 317 aa15.76■□□□□ 0.11
TRIM28-207ENST00000597136 TRPM5Q9NZQ8 1165 aa15.76■□□□□ 0.11
TRIM28-207ENST00000597136 MUTYHQ9UIF7 546 aa15.76■□□□□ 0.11
TRIM28-207ENST00000597136 USP3Q9Y6I4 520 aa15.76■□□□□ 0.11
TRIM28-207ENST00000597136 NUMBLQ9Y6R0 609 aa15.76■□□□□ 0.11
TRIM28-207ENST00000597136 UNGP13051 313 aaPredicted RBP15.75■□□□□ 0.11
TRIM28-207ENST00000597136 CDH5P33151 784 aaPredicted RBP15.75■□□□□ 0.11
TRIM28-207ENST00000597136 PLA2G4AP47712 749 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 TKTL1P51854 596 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 NOMO3P69849 1222 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 SPA17Q15506 151 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 ARHGAP15Q53QZ3 475 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 CCDC122Q5T0U0 273 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 NAA35Q5VZE5 725 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 MON1AQ86VX9 555 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 SLC44A3Q8N4M1 653 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 ARL14EPQ8N8R7 260 aaPredicted RBP15.75■□□□□ 0.11
TRIM28-207ENST00000597136 TMEM35BQ8NCS4 154 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 CPA5Q8WXQ8 436 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 LRRC3BQ96PB8 259 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 SLITRK1Q96PX8 696 aa15.75■□□□□ 0.11
TRIM28-207ENST00000597136 GCNAQ96QF7 691 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms