RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 DRC7Q8IY82 874 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 ZDHHC14Q8IZN3 488 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 ELMOD1Q8N336 334 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 OR8K1Q8NGG5 319 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 OVCA2Q8WZ82 227 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 FBXO32Q969P5 355 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 PPP1R13BQ96KQ4 1090 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 ASB16Q96NS5 453 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 NECAB3Q96P71 396 aaPredicted RBP11.12□□□□□ -0.63
LIG1-210ENST00000596332 CCSER2Q9H7U1 834 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 GRPEL1Q9HAV7 217 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 CNGB3Q9NQW8 809 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 ABHD10Q9NUJ1 306 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.12□□□□□ -0.63
LIG1-210ENST00000596332 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.12□□□□□ -0.63
LIG1-210ENST00000596332 PRKAG3Q9UGI9 489 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 CCL26Q9Y258 94 aa11.12□□□□□ -0.63
LIG1-210ENST00000596332 A0A087X0T9 212 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 SPDYE4A6NLX3 237 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 SOBPA7XYQ1 873 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 ZNF263O14978 683 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 COCHO43405 550 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 PRAMEF12O95522 483 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 LSM8O95777 96 aaKnown RBP11.11□□□□□ -0.63
LIG1-210ENST00000596332 TPM3P06753 285 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 FAM228BP0C875 321 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 LCP1P13796 627 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 SP100P23497 879 aaPredicted RBP11.11□□□□□ -0.63
LIG1-210ENST00000596332 CDC25CP30307 473 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 VIPR2P41587 438 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 KLHL30Q0D2K2 578 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 HTR4Q13639 388 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 TRIM14Q14142 442 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 GPR158Q5T848 1215 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 NAA35Q5VZE5 725 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 OLFML1Q6UWY5 402 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 MON1BQ7L1V2 547 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 GET4Q7L5D6 327 aaPredicted RBP11.11□□□□□ -0.63
LIG1-210ENST00000596332 XYLT1Q86Y38 959 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 PHF13Q86YI8 300 aaPredicted RBP11.11□□□□□ -0.63
LIG1-210ENST00000596332 TMEM139Q8IV31 216 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 CMTM8Q8IZV2 173 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 ARL14EPQ8N8R7 260 aaPredicted RBP11.11□□□□□ -0.63
LIG1-210ENST00000596332 MAB21L3Q8N8X9 362 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 TMEM35BQ8NCS4 154 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 RSAD2Q8WXG1 361 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 USP13Q92995 863 aaPredicted RBP11.11□□□□□ -0.63
LIG1-210ENST00000596332 RPGRIP1Q96KN7 1286 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 DNAI2Q9GZS0 605 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 MIS12Q9H081 205 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 SMG9Q9H0W8 520 aaKnown RBP11.11□□□□□ -0.63
LIG1-210ENST00000596332 NUCKS1Q9H1E3 243 aaKnown RBP11.11□□□□□ -0.63
LIG1-210ENST00000596332 ISCUQ9H1K1 167 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 FBXO44Q9H4M3 255 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 TASP1Q9H6P5 420 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 CLIC5Q9NZA1 410 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 GDE1Q9NZC3 331 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 CALCOCO1Q9P1Z2 691 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 UXTQ9UBK9 157 aaPredicted RBP11.11□□□□□ -0.63
LIG1-210ENST00000596332 TMEM59LQ9UK28 342 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 NUDT5Q9UKK9 219 aa11.11□□□□□ -0.63
LIG1-210ENST00000596332 AKR1B15C9JRZ8 316 aaPredicted RBP11.1□□□□□ -0.63
LIG1-210ENST00000596332 FGF19O95750 216 aa11.1□□□□□ -0.63
LIG1-210ENST00000596332 SERPING1P05155 500 aa11.1□□□□□ -0.63
LIG1-210ENST00000596332 EIF4A3P38919 411 aaKnown RBP11.1□□□□□ -0.63
LIG1-210ENST00000596332 ACADSBP45954 432 aa11.1□□□□□ -0.63
LIG1-210ENST00000596332 PPP3CCP48454 512 aa11.1□□□□□ -0.63
LIG1-210ENST00000596332 PITX1P78337 314 aaPredicted RBP11.1□□□□□ -0.63
LIG1-210ENST00000596332 SLC7A9P82251 487 aa11.1□□□□□ -0.63
LIG1-210ENST00000596332 CDK17Q00537 523 aa11.1□□□□□ -0.63
LIG1-210ENST00000596332 AAK1Q2M2I8 961 aa11.1□□□□□ -0.63
LIG1-210ENST00000596332 PPP1R15BQ5SWA1 713 aa11.1□□□□□ -0.63
LIG1-210ENST00000596332 ARTNQ5T4W7 220 aa11.1□□□□□ -0.63
LIG1-210ENST00000596332 OTUD1Q5VV17 481 aaPredicted RBP11.1□□□□□ -0.63
LIG1-210ENST00000596332 SYPL2Q5VXT5 272 aa11.1□□□□□ -0.63
LIG1-210ENST00000596332 BSPRYQ5W0U4 402 aa11.1□□□□□ -0.63
LIG1-210ENST00000596332 ACAD10Q6JQN1 1059 aa11.1□□□□□ -0.63
LIG1-210ENST00000596332 FAM183BPQ6ZVS7 135 aa11.1□□□□□ -0.63
LIG1-210ENST00000596332 OTOP3Q7RTS5 596 aa11.1□□□□□ -0.63
LIG1-210ENST00000596332 BNIPLQ7Z465 357 aa11.1□□□□□ -0.63
LIG1-210ENST00000596332 ARID3BQ8IVW6 561 aaPredicted RBP11.1□□□□□ -0.63
LIG1-210ENST00000596332 MCOLN2Q8IZK6 566 aa11.1□□□□□ -0.63
LIG1-210ENST00000596332 ZSCAN18Q8TBC5 510 aaPredicted RBP11.1□□□□□ -0.63
LIG1-210ENST00000596332 IRGQQ8WZA9 623 aa11.1□□□□□ -0.63
LIG1-210ENST00000596332 P2RY11Q96G91 374 aa11.1□□□□□ -0.63
LIG1-210ENST00000596332 SLITRK1Q96PX8 696 aa11.1□□□□□ -0.63
LIG1-210ENST00000596332 KLF16Q9BXK1 252 aaPredicted RBP11.1□□□□□ -0.63
LIG1-210ENST00000596332 LRRC4Q9HBW1 653 aa11.1□□□□□ -0.63
LIG1-210ENST00000596332 TRPM5Q9NZQ8 1165 aa11.1□□□□□ -0.63
LIG1-210ENST00000596332 LIMD1Q9UGP4 676 aa11.1□□□□□ -0.63
LIG1-210ENST00000596332 ADAMTS1Q9UHI8 967 aa11.1□□□□□ -0.63
LIG1-210ENST00000596332 MUC3AQ02505 3323 aa11.09□□□□□ -0.63
LIG1-210ENST00000596332 SHISA7A6NL88 538 aa11.09□□□□□ -0.63
LIG1-210ENST00000596332 MDM4O15151 490 aa11.09□□□□□ -0.63
LIG1-210ENST00000596332 FBXO21O94952 628 aa11.09□□□□□ -0.63
LIG1-210ENST00000596332 GJB6O95452 261 aa11.09□□□□□ -0.63
LIG1-210ENST00000596332 IGLV3-25P01717 112 aa11.09□□□□□ -0.63
LIG1-210ENST00000596332 ASGR2P07307 311 aa11.09□□□□□ -0.63
LIG1-210ENST00000596332 GZMAP12544 262 aa11.09□□□□□ -0.63
LIG1-210ENST00000596332 RARGP13631 454 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms