RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 GALK1P51570 392 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 CCR3P51677 355 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 CSTF1Q05048 431 aaKnown RBP13.76□□□□□ -0.21
USE1-207ENST00000596136 LRMPQ12912 555 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 GAB4Q2WGN9 574 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 PKDCCQ504Y2 493 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 SMYD5Q6GMV2 418 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 FSTL4Q6MZW2 842 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 ZC3H14Q6PJT7 736 aaKnown RBP13.76□□□□□ -0.21
USE1-207ENST00000596136 ASCL5Q7RTU5 278 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 SCD5Q86SK9 330 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 NKD2Q969F2 451 aaPredicted RBP13.76□□□□□ -0.21
USE1-207ENST00000596136 JAKMIP2Q96AA8 810 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 OTUB2Q96DC9 234 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 NUP62CLQ9H1M0 184 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 NMUR1Q9HB89 426 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 FBRSL1Q9HCM7 1045 aaKnown RBP13.76□□□□□ -0.21
USE1-207ENST00000596136 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.76□□□□□ -0.21
USE1-207ENST00000596136 SMPD4Q9NXE4 827 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 CLIC5Q9NZA1 410 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 CFAP97Q9P2B7 532 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 TBC1D14Q9P2M4 693 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 CNTN6Q9UQ52 1028 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 PCDHGA2Q9Y5H1 932 aa13.76□□□□□ -0.21
USE1-207ENST00000596136 EP300Q09472 2414 aaPredicted RBP13.76□□□□□ -0.21
USE1-207ENST00000596136 OTOGLQ3ZCN5 2332 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 ATG2BQ96BY7 2078 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 ZNF292O60281 2723 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 O00370 1275 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 CYP26A1O43174 497 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 GREM1O60565 184 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 GFRA3O60609 400 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 LILRB5O75023 590 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 DRD1P21728 446 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 ERCC5P28715 1186 aaPredicted RBP13.75□□□□□ -0.21
USE1-207ENST00000596136 CXCL12P48061 93 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 ZNF132P52740 706 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 GRSF1Q12849 480 aaKnown RBP eCLIP13.75□□□□□ -0.21
USE1-207ENST00000596136 SGO2Q562F6 1265 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 CT47A1Q5JQC4 288 aaPredicted RBP13.75□□□□□ -0.21
USE1-207ENST00000596136 PM20D1Q6GTS8 502 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 RHBDF2Q6PJF5 856 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 LCLAT1Q6UWP7 414 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 Q6ZS52 159 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 HTR3DQ70Z44 454 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 PIGZQ86VD9 579 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 PPM1KQ8N3J5 372 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 KAT5Q92993 513 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 EXOC4Q96A65 974 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 P2RY13Q9BPV8 354 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 KLF16Q9BXK1 252 aaPredicted RBP13.75□□□□□ -0.21
USE1-207ENST00000596136 ZSCAN32Q9NX65 697 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 TSPAN16Q9UKR8 245 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 R4GN57 208 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 GVINP1Q7Z2Y8 2422 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 FRYLO94915 3013 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 CFAP54Q96N23 3096 aa13.75□□□□□ -0.21
USE1-207ENST00000596136 GPR179Q6PRD1 2367 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 A0A1W2PQH9 124 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 CHURC1-FNTBB4DL54 471 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 RNF225M0QZC1 329 aaPredicted RBP13.74□□□□□ -0.21
USE1-207ENST00000596136 XPO1O14980 1071 aaKnown RBP13.74□□□□□ -0.21
USE1-207ENST00000596136 TBX18O95935 607 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 CYP17A1P05093 508 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 RARGP13631 454 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 HOXA6P31267 233 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 ATP5C1P36542 298 aaKnown RBP13.74□□□□□ -0.21
USE1-207ENST00000596136 OPRD1P41143 372 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 BCAT1P54687 386 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 NRLP54845 237 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 SLC8A3P57103 927 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 PDE4CQ08493 712 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 BST2Q10589 180 aaKnown RBP13.74□□□□□ -0.21
USE1-207ENST00000596136 PPP2R5DQ14738 602 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 DHCR24Q15392 516 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 CNGA2Q16280 664 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 DPCR1Q3MIW9 517 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 FBXO43Q4G163 708 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 NAIF1Q69YI7 327 aaPredicted RBP13.74□□□□□ -0.21
USE1-207ENST00000596136 TMEM270Q6UE05 265 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 RBM43Q6ZSC3 357 aaKnown RBP13.74□□□□□ -0.21
USE1-207ENST00000596136 ARHGEF19Q8IW93 802 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 SCML4Q8N228 414 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 TTC16Q8NEE8 873 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 TFAP2BQ92481 460 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 EZH1Q92800 747 aaPredicted RBP13.74□□□□□ -0.21
USE1-207ENST00000596136 CD101Q93033 1021 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 CNOT6LQ96LI5 555 aaKnown RBP13.74□□□□□ -0.21
USE1-207ENST00000596136 KREMEN1Q96MU8 473 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 GBP4Q96PP9 640 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 ZSWIM1Q9BR11 485 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 INTS2Q9H0H0 1204 aaKnown RBP13.74□□□□□ -0.21
USE1-207ENST00000596136 THAP9Q9H5L6 903 aa13.74□□□□□ -0.21
USE1-207ENST00000596136 A0A0A0MRY4 1105 aa13.73□□□□□ -0.21
USE1-207ENST00000596136 GTPBP10A4D1E9 387 aaKnown RBP13.73□□□□□ -0.21
USE1-207ENST00000596136 K7ESF4 209 aa13.73□□□□□ -0.21
USE1-207ENST00000596136 TULP2O00295 520 aa13.73□□□□□ -0.21
USE1-207ENST00000596136 EGFP01133 1207 aa13.73□□□□□ -0.21
USE1-207ENST00000596136 SETSIPP0DME0 302 aa13.73□□□□□ -0.21
USE1-207ENST00000596136 EIF2DP41214 584 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms