RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 NDRG1Q92597 394 aaKnown RBP15.09■□□□□ 0.01
LIG1-208ENST00000595758 NOX5Q96PH1 765 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 TRMT61BQ9BVS5 477 aaKnown RBP15.09■□□□□ 0.01
LIG1-208ENST00000595758 NACA2Q9H009 215 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 SMOC2Q9H3U7 446 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 CCSER2Q9H7U1 834 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 KIF9Q9HAQ2 790 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 OSER1Q9NX31 292 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 CLIC5Q9NZA1 410 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 CYTH4Q9UIA0 394 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 NOCTQ9UK39 431 aaKnown RBP15.09■□□□□ 0.01
LIG1-208ENST00000595758 ARHGAP26Q9UNA1 814 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 CCL26Q9Y258 94 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 VCANP13611 3396 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 DENND4CQ5VZ89 1909 aa15.09■□□□□ 0.01
LIG1-208ENST00000595758 PI4K2BG5E9Z4 385 aa15.08■□□□□ 0
LIG1-208ENST00000595758 NARSO43776 548 aaKnown RBP15.08■□□□□ 0
LIG1-208ENST00000595758 TLR5O60602 858 aa15.08■□□□□ 0
LIG1-208ENST00000595758 OLFM2O95897 454 aa15.08■□□□□ 0
LIG1-208ENST00000595758 RALAP11233 206 aa15.08■□□□□ 0
LIG1-208ENST00000595758 SRFP11831 508 aa15.08■□□□□ 0
LIG1-208ENST00000595758 RARGP13631 454 aa15.08■□□□□ 0
LIG1-208ENST00000595758 FERP16591 822 aa15.08■□□□□ 0
LIG1-208ENST00000595758 YWHAGP61981 247 aaKnown RBP eCLIP15.08■□□□□ 0
LIG1-208ENST00000595758 GPC5P78333 572 aa15.08■□□□□ 0
LIG1-208ENST00000595758 SLC7A9P82251 487 aa15.08■□□□□ 0
LIG1-208ENST00000595758 PLCB2Q00722 1185 aa15.08■□□□□ 0
LIG1-208ENST00000595758 CDR2Q01850 454 aa15.08■□□□□ 0
LIG1-208ENST00000595758 PDCLQ13371 301 aa15.08■□□□□ 0
LIG1-208ENST00000595758 GRM2Q14416 872 aa15.08■□□□□ 0
LIG1-208ENST00000595758 TMEM110Q86TL2 294 aa15.08■□□□□ 0
LIG1-208ENST00000595758 GAS2L3Q86XJ1 694 aa15.08■□□□□ 0
LIG1-208ENST00000595758 SCUBE3Q8IX30 993 aa15.08■□□□□ 0
LIG1-208ENST00000595758 YAF2Q8IY57 180 aa15.08■□□□□ 0
LIG1-208ENST00000595758 SCML4Q8N228 414 aa15.08■□□□□ 0
LIG1-208ENST00000595758 TMEM35BQ8NCS4 154 aa15.08■□□□□ 0
LIG1-208ENST00000595758 C1orf131Q8NDD1 294 aaKnown RBP15.08■□□□□ 0
LIG1-208ENST00000595758 BPIFB1Q8TDL5 484 aa15.08■□□□□ 0
LIG1-208ENST00000595758 SLC20A1Q8WUM9 679 aa15.08■□□□□ 0
LIG1-208ENST00000595758 IRGQQ8WZA9 623 aa15.08■□□□□ 0
LIG1-208ENST00000595758 EDAQ92838 391 aa15.08■□□□□ 0
LIG1-208ENST00000595758 LRRC3BQ96PB8 259 aa15.08■□□□□ 0
LIG1-208ENST00000595758 TTYH3Q9C0H2 523 aa15.08■□□□□ 0
LIG1-208ENST00000595758 MIS12Q9H081 205 aa15.08■□□□□ 0
LIG1-208ENST00000595758 CYLDQ9NQC7 956 aa15.08■□□□□ 0
LIG1-208ENST00000595758 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.08■□□□□ 0
LIG1-208ENST00000595758 DUSP12Q9UNI6 340 aa15.08■□□□□ 0
LIG1-208ENST00000595758 OBSL1O75147 1896 aa15.08■□□□□ 0
LIG1-208ENST00000595758 ANAPC1Q9H1A4 1944 aa15.07■□□□□ 0
LIG1-208ENST00000595758 LRRC53A6NM62 1247 aa15.07■□□□□ 0
LIG1-208ENST00000595758 YJEFN3A6XGL0 299 aa15.07■□□□□ 0
LIG1-208ENST00000595758 E5RJQ4 531 aa15.07■□□□□ 0
LIG1-208ENST00000595758 E7ENQ6 273 aa15.07■□□□□ 0
LIG1-208ENST00000595758 LSM8O95777 96 aaKnown RBP15.07■□□□□ 0
LIG1-208ENST00000595758 TBX18O95935 607 aa15.07■□□□□ 0
LIG1-208ENST00000595758 MMEP08473 750 aa15.07■□□□□ 0
LIG1-208ENST00000595758 MBL2P11226 248 aaPredicted RBP15.07■□□□□ 0
LIG1-208ENST00000595758 ATP5C1P36542 298 aaKnown RBP15.07■□□□□ 0
LIG1-208ENST00000595758 SNX16P57768 344 aa15.07■□□□□ 0
LIG1-208ENST00000595758 DAOAP59103 153 aa15.07■□□□□ 0
LIG1-208ENST00000595758 C10orf120Q5SQS8 335 aa15.07■□□□□ 0
LIG1-208ENST00000595758 BTBD8Q5XKL5 378 aa15.07■□□□□ 0
LIG1-208ENST00000595758 BHLHA9Q7RTU4 235 aa15.07■□□□□ 0
LIG1-208ENST00000595758 TADA2BQ86TJ2 420 aa15.07■□□□□ 0
LIG1-208ENST00000595758 ZNF276Q8N554 614 aa15.07■□□□□ 0
LIG1-208ENST00000595758 TTC16Q8NEE8 873 aa15.07■□□□□ 0
LIG1-208ENST00000595758 SH3RF2Q8TEC5 729 aa15.07■□□□□ 0
LIG1-208ENST00000595758 IQCDQ96DY2 449 aa15.07■□□□□ 0
LIG1-208ENST00000595758 PPP1R13BQ96KQ4 1090 aa15.07■□□□□ 0
LIG1-208ENST00000595758 CDK5RAP1Q96SZ6 601 aaKnown RBP15.07■□□□□ 0
LIG1-208ENST00000595758 SLC2A4RGQ9NR83 387 aa15.07■□□□□ 0
LIG1-208ENST00000595758 THG1LQ9NWX6 298 aaKnown RBP15.07■□□□□ 0
LIG1-208ENST00000595758 SMPD4Q9NXE4 827 aa15.07■□□□□ 0
LIG1-208ENST00000595758 CPQQ9Y646 472 aa15.07■□□□□ 0
LIG1-208ENST00000595758 A0A1W2PQJ5 194 aa15.06■□□□□ 0
LIG1-208ENST00000595758 ZNF263O14978 683 aa15.06■□□□□ 0
LIG1-208ENST00000595758 SART1O43290 800 aaKnown RBP15.06■□□□□ 0
LIG1-208ENST00000595758 CHRNB2P17787 502 aa15.06■□□□□ 0
LIG1-208ENST00000595758 GDI1P31150 447 aa15.06■□□□□ 0
LIG1-208ENST00000595758 CDH5P33151 784 aaPredicted RBP15.06■□□□□ 0
LIG1-208ENST00000595758 FCHO2Q0JRZ9 810 aa15.06■□□□□ 0
LIG1-208ENST00000595758 ASIC2Q16515 512 aa15.06■□□□□ 0
LIG1-208ENST00000595758 SFMBT2Q5VUG0 894 aa15.06■□□□□ 0
LIG1-208ENST00000595758 BSPRYQ5W0U4 402 aa15.06■□□□□ 0
LIG1-208ENST00000595758 KLHDC10Q6PID8 442 aa15.06■□□□□ 0
LIG1-208ENST00000595758 SARM1Q6SZW1 724 aa15.06■□□□□ 0
LIG1-208ENST00000595758 RSRC2Q7L4I2 434 aaKnown RBP15.06■□□□□ 0
LIG1-208ENST00000595758 IRF2BP2Q7Z5L9 587 aa15.06■□□□□ 0
LIG1-208ENST00000595758 ZNF397Q8NF99 534 aaPredicted RBP15.06■□□□□ 0
LIG1-208ENST00000595758 CLEC4CQ8WTT0 213 aa15.06■□□□□ 0
LIG1-208ENST00000595758 CPLX3Q8WVH0 158 aa15.06■□□□□ 0
LIG1-208ENST00000595758 GOLGA1Q92805 767 aa15.06■□□□□ 0
LIG1-208ENST00000595758 CPXM1Q96SM3 734 aa15.06■□□□□ 0
LIG1-208ENST00000595758 EPHX3Q9H6B9 360 aa15.06■□□□□ 0
LIG1-208ENST00000595758 SYNCQ9H7C4 482 aa15.06■□□□□ 0
LIG1-208ENST00000595758 BRD9Q9H8M2 597 aa15.06■□□□□ 0
LIG1-208ENST00000595758 AIPL1Q9NZN9 384 aa15.06■□□□□ 0
LIG1-208ENST00000595758 DNMT3LQ9UJW3 386 aa15.06■□□□□ 0
LIG1-208ENST00000595758 NUDT5Q9UKK9 219 aa15.06■□□□□ 0
LIG1-208ENST00000595758 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.06■□□□□ 03e-7■□□□□ 10.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms