RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 EPN2O95208 641 aa18.01■□□□□ 0.47
CCDC9-202ENST00000595659 KAT7O95251 611 aa18.01■□□□□ 0.47
CCDC9-202ENST00000595659 ADH1CP00326 375 aa18.01■□□□□ 0.47
CCDC9-202ENST00000595659 HNRNPLP14866 589 aaKnown RBP eCLIP18.01■□□□□ 0.47
CCDC9-202ENST00000595659 KCNA4P22459 653 aa18.01■□□□□ 0.47
CCDC9-202ENST00000595659 RPL13P26373 211 aaKnown RBP18.01■□□□□ 0.47
CCDC9-202ENST00000595659 PNOCQ13519 176 aa18.01■□□□□ 0.47
CCDC9-202ENST00000595659 NFIL3Q16649 462 aa18.01■□□□□ 0.47
CCDC9-202ENST00000595659 ZNF394Q53GI3 561 aa18.01■□□□□ 0.47
CCDC9-202ENST00000595659 TMEM92Q6UXU6 159 aa18.01■□□□□ 0.47
CCDC9-202ENST00000595659 TXNDC5Q8NBS9 432 aaKnown RBP18.01■□□□□ 0.47
CCDC9-202ENST00000595659 WHAMMQ8TF30 809 aa18.01■□□□□ 0.47
CCDC9-202ENST00000595659 CYFIP2Q96F07 1278 aa18.01■□□□□ 0.47
CCDC9-202ENST00000595659 DUSP15Q9H1R2 295 aaPredicted RBP18.01■□□□□ 0.47
CCDC9-202ENST00000595659 ARHGEF4Q9NR80 690 aa18.01■□□□□ 0.47
CCDC9-202ENST00000595659 COMMD8Q9NX08 183 aa18.01■□□□□ 0.47
CCDC9-202ENST00000595659 TBC1D14Q9P2M4 693 aa18.01■□□□□ 0.47
CCDC9-202ENST00000595659 NUDT5Q9UKK9 219 aa18.01■□□□□ 0.47
CCDC9-202ENST00000595659 DENND4CQ5VZ89 1909 aa18.01■□□□□ 0.47
CCDC9-202ENST00000595659 FAM92AA1XBS5 289 aa18■□□□□ 0.47
CCDC9-202ENST00000595659 MDM4O15151 490 aa18■□□□□ 0.47
CCDC9-202ENST00000595659 CYP26A1O43174 497 aa18■□□□□ 0.47
CCDC9-202ENST00000595659 TLR5O60602 858 aa18■□□□□ 0.47
CCDC9-202ENST00000595659 KLF8O95600 359 aaPredicted RBP18■□□□□ 0.47
CCDC9-202ENST00000595659 APODP05090 189 aa18■□□□□ 0.47
CCDC9-202ENST00000595659 GBP1P32455 592 aa18■□□□□ 0.47
CCDC9-202ENST00000595659 INCA1Q0VD86 236 aa18■□□□□ 0.47
CCDC9-202ENST00000595659 ANO4Q32M45 955 aa18■□□□□ 0.47
CCDC9-202ENST00000595659 CLEC20AQ6ZU45 233 aa18■□□□□ 0.47
CCDC9-202ENST00000595659 TMEM25Q86YD3 366 aa18■□□□□ 0.47
CCDC9-202ENST00000595659 KIAA1958Q8N8K9 716 aa18■□□□□ 0.47
CCDC9-202ENST00000595659 C12orf50Q8NA57 414 aaPredicted RBP18■□□□□ 0.47
CCDC9-202ENST00000595659 CCDC26Q8TAB7 109 aa18■□□□□ 0.47
CCDC9-202ENST00000595659 SEMA4DQ92854 862 aa18■□□□□ 0.47
CCDC9-202ENST00000595659 LOXL4Q96JB6 756 aa18■□□□□ 0.47
CCDC9-202ENST00000595659 ZC3H10Q96K80 434 aaKnown RBP18■□□□□ 0.47
CCDC9-202ENST00000595659 HNRNPABQ99729 332 aaKnown RBP18■□□□□ 0.47
CCDC9-202ENST00000595659 NT5C1AQ9BXI3 368 aa18■□□□□ 0.47
CCDC9-202ENST00000595659 FBXO44Q9H4M3 255 aa18■□□□□ 0.47
CCDC9-202ENST00000595659 CYP3A43Q9HB55 503 aa18■□□□□ 0.47
CCDC9-202ENST00000595659 TLR8Q9NR97 1041 aaKnown RBP18■□□□□ 0.47
CCDC9-202ENST00000595659 OSER1Q9NX31 292 aa18■□□□□ 0.47
CCDC9-202ENST00000595659 EBF1Q9UH73 591 aa18■□□□□ 0.47
CCDC9-202ENST00000595659 MMP17Q9ULZ9 603 aa18■□□□□ 0.47
CCDC9-202ENST00000595659 CEP250Q9BV73 2442 aa17.99■□□□□ 0.47
CCDC9-202ENST00000595659 HHLA1C9JL84 531 aa17.99■□□□□ 0.47
CCDC9-202ENST00000595659 SGK1O00141 431 aa17.99■□□□□ 0.47
CCDC9-202ENST00000595659 TRIM24O15164 1050 aa17.99■□□□□ 0.47
CCDC9-202ENST00000595659 ZNF806P0C7X5 589 aa17.99■□□□□ 0.47
CCDC9-202ENST00000595659 ACO1P21399 889 aaKnown RBP17.99■□□□□ 0.47
CCDC9-202ENST00000595659 MPLP40238 635 aa17.99■□□□□ 0.47
CCDC9-202ENST00000595659 TUBP50607 506 aa17.99■□□□□ 0.47
CCDC9-202ENST00000595659 GAD2Q05329 585 aa17.99■□□□□ 0.47
CCDC9-202ENST00000595659 ZCWPW2Q504Y3 356 aa17.99■□□□□ 0.47
CCDC9-202ENST00000595659 TCEAL6Q6IPX3 200 aa17.99■□□□□ 0.47
CCDC9-202ENST00000595659 IL17RCQ8NAC3 791 aa17.99■□□□□ 0.47
CCDC9-202ENST00000595659 ERCC4Q92889 916 aaPredicted RBP17.99■□□□□ 0.47
CCDC9-202ENST00000595659 TCEAL3Q969E4 200 aa17.99■□□□□ 0.47
CCDC9-202ENST00000595659 NIF3L1Q9GZT8 377 aa17.99■□□□□ 0.47
CCDC9-202ENST00000595659 NMUR1Q9HB89 426 aa17.99■□□□□ 0.47
CCDC9-202ENST00000595659 TMEM8AQ9HCN3 771 aa17.99■□□□□ 0.47
CCDC9-202ENST00000595659 CIZ1Q9ULV3 898 aaPredicted RBP17.99■□□□□ 0.47
CCDC9-202ENST00000595659 A0A1W2PQH9 124 aa17.98■□□□□ 0.47
CCDC9-202ENST00000595659 TBC1D3BA6NDS4 549 aa17.98■□□□□ 0.47
CCDC9-202ENST00000595659 CILPO75339 1184 aa17.98■□□□□ 0.47
CCDC9-202ENST00000595659 BCKDHBP21953 392 aa17.98■□□□□ 0.47
CCDC9-202ENST00000595659 GRIA2P42262 883 aa17.98■□□□□ 0.47
CCDC9-202ENST00000595659 MRPS21P82921 87 aaKnown RBP17.98■□□□□ 0.47
CCDC9-202ENST00000595659 CREB5Q02930 508 aa17.98■□□□□ 0.47
CCDC9-202ENST00000595659 ELF2Q15723 593 aa17.98■□□□□ 0.47
CCDC9-202ENST00000595659 CRY1Q16526 586 aa17.98■□□□□ 0.47
CCDC9-202ENST00000595659 USP39Q53GS9 565 aaKnown RBP17.98■□□□□ 0.47
CCDC9-202ENST00000595659 PPM1JQ5JR12 505 aa17.98■□□□□ 0.47
CCDC9-202ENST00000595659 BTBD8Q5XKL5 378 aa17.98■□□□□ 0.47
CCDC9-202ENST00000595659 PHTF2Q8N3S3 785 aa17.98■□□□□ 0.47
CCDC9-202ENST00000595659 CCDC150Q8NCX0 1101 aa17.98■□□□□ 0.47
CCDC9-202ENST00000595659 MDGA1Q8NFP4 955 aa17.98■□□□□ 0.47
CCDC9-202ENST00000595659 SPHK2Q9NRA0 654 aa17.98■□□□□ 0.47
CCDC9-202ENST00000595659 SCML2Q9UQR0 700 aa17.98■□□□□ 0.47
CCDC9-202ENST00000595659 ZNF638Q14966 1978 aaKnown RBP17.98■□□□□ 0.47
CCDC9-202ENST00000595659 ANAPC1Q9H1A4 1944 aa17.98■□□□□ 0.47
CCDC9-202ENST00000595659 CACNA1AO00555 2505 aa17.97■□□□□ 0.47
CCDC9-202ENST00000595659 TULP3O75386 442 aa17.97■□□□□ 0.47
CCDC9-202ENST00000595659 RHOBTB1O94844 696 aa17.97■□□□□ 0.47
CCDC9-202ENST00000595659 CHRM1P11229 460 aaPredicted RBP17.97■□□□□ 0.47
CCDC9-202ENST00000595659 TRIM21P19474 475 aaKnown RBP17.97■□□□□ 0.47
CCDC9-202ENST00000595659 PRCPP42785 496 aa17.97■□□□□ 0.47
CCDC9-202ENST00000595659 PLA2G2CQ5R387 149 aa17.97■□□□□ 0.47
CCDC9-202ENST00000595659 PPP1R26Q5T8A7 1209 aaPredicted RBP17.97■□□□□ 0.47
CCDC9-202ENST00000595659 KRT39Q6A163 491 aa17.97■□□□□ 0.47
CCDC9-202ENST00000595659 RLN3Q8WXF3 142 aa17.97■□□□□ 0.47
CCDC9-202ENST00000595659 TATDN2Q93075 761 aa17.97■□□□□ 0.47
CCDC9-202ENST00000595659 OTUB2Q96DC9 234 aa17.97■□□□□ 0.47
CCDC9-202ENST00000595659 ERLEC1Q96DZ1 483 aa17.97■□□□□ 0.47
CCDC9-202ENST00000595659 HEXIM2Q96MH2 286 aaKnown RBP17.97■□□□□ 0.47
CCDC9-202ENST00000595659 ARID3AQ99856 593 aa17.97■□□□□ 0.47
CCDC9-202ENST00000595659 KLF16Q9BXK1 252 aaPredicted RBP17.97■□□□□ 0.47
CCDC9-202ENST00000595659 PTPRDP23468 1912 aa17.97■□□□□ 0.47
CCDC9-202ENST00000595659 GREB1Q4ZG55 1949 aa17.97■□□□□ 0.47
CCDC9-202ENST00000595659 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms