RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 BRD2P25440 801 aaKnown RBP11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 PLA2G5P39877 138 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 KPNA1P52294 538 aaPredicted RBP11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 BCAT1P54687 386 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 BST2Q10589 180 aaKnown RBP11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 RUNX3Q13761 415 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 KCNJ12Q14500 433 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 PDGFRLQ15198 375 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 HECTD3Q5T447 861 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 NAIF1Q69YI7 327 aaPredicted RBP11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 LCLAT1Q6UWP7 414 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 GBP6Q6ZN66 633 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 CCDC186Q7Z3E2 898 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 RALGPS2Q86X27 583 aaPredicted RBP11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 FAM114A1Q8IWE2 563 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 UBA3Q8TBC4 463 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 ENOX1Q8TC92 643 aaKnown RBP11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 PHOX2BQ99453 314 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 TUBGCP2Q9BSJ2 902 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 LINC00597Q9H2U6 94 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 NDST4Q9H3R1 872 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 C8orf33Q9H7E9 229 aaPredicted RBP11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 CYLDQ9NQC7 956 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 TLR8Q9NR97 1041 aaKnown RBP11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 DUS2Q9NX74 493 aaKnown RBP11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 CFAP97Q9P2B7 532 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 GVINP1Q7Z2Y8 2422 aa11.58□□□□□ -0.56
SHKBP1-206ENST00000595523 EP300Q09472 2414 aaPredicted RBP11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 OTOGLQ3ZCN5 2332 aa11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 XPO1O14980 1071 aaKnown RBP11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 GREM1O60565 184 aa11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 CHRNB1P11230 501 aa11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 RPS9P46781 194 aaKnown RBP11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 PLA2G4AP47712 749 aa11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 PTPN5P54829 565 aa11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 PON2Q15165 354 aa11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 ANGPT1Q15389 498 aa11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 CNGA2Q16280 664 aa11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 STX1AQ16623 288 aa11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 EXOC3L4Q17RC7 722 aa11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 GAB4Q2WGN9 574 aa11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 VWA3BQ502W6 1294 aa11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 TCP11X2Q5H9J9 407 aa11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 CC2D1AQ6P1N0 951 aaPredicted RBP11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 MAML2Q8IZL2 1156 aaPredicted RBP11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 NDRG1Q92597 394 aaKnown RBP11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 MSANTD3Q96H12 275 aa11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 NELL2Q99435 816 aa11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 HSD3B7Q9H2F3 369 aa11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 ECT2Q9H8V3 914 aa11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 ACP6Q9NPH0 428 aa11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 RBM12Q9NTZ6 932 aaKnown RBP11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 APEX2Q9UBZ4 518 aa11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 NUDT5Q9UKK9 219 aa11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 KIAA1257Q9ULG3 409 aa11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 MRPS17Q9Y2R5 130 aaKnown RBP11.57□□□□□ -0.56
SHKBP1-206ENST00000595523 CFAP54Q96N23 3096 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 SPAG17Q6Q759 2223 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 GPR179Q6PRD1 2367 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 MDM4O15151 490 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 RARGP13631 454 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 PRKCSHP14314 528 aaPredicted RBP11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 EEF1GP26641 437 aaKnown RBP11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 GJA4P35212 333 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 IFNAR2P48551 515 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 TKTL1P51854 596 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 KCNMA1Q12791 1236 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 CCINQ13939 588 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 GAS6Q14393 721 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 NCAPHQ15003 741 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 PM20D1Q6GTS8 502 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 PMF1Q6P1K2 205 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 SASS6Q6UVJ0 657 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 KIAA1958Q8N8K9 716 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 SLC35F5Q8WV83 523 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 SHC3Q92529 594 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 SECISBP2LQ93073 1101 aaKnown RBP11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 ATP2A3Q93084 1043 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 KLF16Q9BXK1 252 aaPredicted RBP11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 ULBP1Q9BZM6 244 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 CHRDQ9H2X0 955 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 FBRSL1Q9HCM7 1045 aaKnown RBP11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 FAM86C1Q9NVL1 165 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 ANO10Q9NW15 660 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 FANCLQ9NW38 375 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 TAB2Q9NYJ8 693 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 HESX1Q9UBX0 185 aa11.56□□□□□ -0.56
SHKBP1-206ENST00000595523 E2F8A0AVK6 867 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 M0QYV0 167 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 ZBED1O96006 694 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 CYP17A1P05093 508 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 SETSIPP0DME0 302 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 KRT5P13647 590 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 MAGEA9P43362 315 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 RGS7P49802 495 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 MFAP3P55082 362 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 TYRO3Q06418 890 aa11.55□□□□□ -0.56
SHKBP1-206ENST00000595523 ADIGQ0VDE8 80 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms