RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 STXBP5Q5T5C0 1151 aa23.69■■□□□ 1.38
SNRNP70-204ENST00000595231 ING5Q8WYH8 240 aa23.69■■□□□ 1.38
SNRNP70-204ENST00000595231 C18orf8Q96DM3 657 aa23.69■■□□□ 1.38
SNRNP70-204ENST00000595231 NENFQ9UMX5 172 aa23.69■■□□□ 1.38
SNRNP70-204ENST00000595231 PUS10Q3MIT2 529 aaKnown RBP23.68■■□□□ 1.38
SNRNP70-204ENST00000595231 MMS22LQ6ZRQ5 1243 aa23.68■■□□□ 1.38
SNRNP70-204ENST00000595231 MON1BQ7L1V2 547 aa23.68■■□□□ 1.38
SNRNP70-204ENST00000595231 VPS36Q86VN1 386 aa23.68■■□□□ 1.38
SNRNP70-204ENST00000595231 DNAAF5Q86Y56 855 aa23.68■■□□□ 1.38
SNRNP70-204ENST00000595231 IPO4Q8TEX9 1081 aaKnown RBP23.68■■□□□ 1.38
SNRNP70-204ENST00000595231 IRGQQ8WZA9 623 aa23.68■■□□□ 1.38
SNRNP70-204ENST00000595231 FGF13Q92913 245 aa23.68■■□□□ 1.38
SNRNP70-204ENST00000595231 PIWIL1Q96J94 861 aaKnown RBP23.68■■□□□ 1.38
SNRNP70-204ENST00000595231 TLR8Q9NR97 1041 aaKnown RBP23.68■■□□□ 1.38
SNRNP70-204ENST00000595231 DOCK8Q8NF50 2099 aa23.68■■□□□ 1.38
SNRNP70-204ENST00000595231 A0A1W2PQH9 124 aa23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 TMCO5BA8MYB1 307 aa23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 SNX16P57768 344 aa23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 HFE2Q6ZVN8 426 aa23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 FAM183BPQ6ZVS7 135 aa23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 GET4Q7L5D6 327 aaPredicted RBP23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 XYLT1Q86Y38 959 aa23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 NPAS3Q8IXF0 933 aa23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 ISCUQ9H1K1 167 aa23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 SYNCQ9H7C4 482 aa23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 NAGPAQ9UK23 515 aa23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 GSDMDP57764 484 aa23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 GFPT1Q06210 699 aaPredicted RBP23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 SLC18A3Q16572 532 aa23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 TXNDC8Q6A555 127 aa23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 OLFML1Q6UWY5 402 aa23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 TMEM139Q8IV31 216 aa23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 MRPS31Q92665 395 aaKnown RBP23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 KHSRPQ92945 711 aaKnown RBP eCLIP23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 PDLIM2Q96JY6 352 aa23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 CCDC42Q96M95 316 aa23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 ZSWIM3Q96MP5 696 aa23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 GCNAQ96QF7 691 aa23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 C11orf70Q9BRQ4 267 aa23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 SLC46A2Q9BY10 475 aa23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.67■■□□□ 1.389e-18■□□□□ 9.9
SNRNP70-204ENST00000595231 ADAM22Q9P0K1 906 aa23.67■■□□□ 1.38
SNRNP70-204ENST00000595231 C2orf78A6NCI8 922 aa23.66■■□□□ 1.38
SNRNP70-204ENST00000595231 GOLGA6L6A8MZA4 724 aa23.66■■□□□ 1.38
SNRNP70-204ENST00000595231 RTN2O75298 545 aa23.66■■□□□ 1.38
SNRNP70-204ENST00000595231 ABL1P00519 1130 aa23.66■■□□□ 1.38
SNRNP70-204ENST00000595231 FTLP02792 175 aaPredicted RBP23.66■■□□□ 1.38
SNRNP70-204ENST00000595231 IL9P15248 144 aa23.66■■□□□ 1.38
SNRNP70-204ENST00000595231 PSEN1P49768 467 aa23.66■■□□□ 1.38
SNRNP70-204ENST00000595231 KCNQ1P51787 676 aa23.66■■□□□ 1.38
SNRNP70-204ENST00000595231 YWHAGP61981 247 aaKnown RBP eCLIP23.66■■□□□ 1.38
SNRNP70-204ENST00000595231 TAF5Q15542 800 aa23.66■■□□□ 1.38
SNRNP70-204ENST00000595231 ZDHHC17Q8IUH5 632 aa23.66■■□□□ 1.38
SNRNP70-204ENST00000595231 MCOLN2Q8IZK6 566 aa23.66■■□□□ 1.38
SNRNP70-204ENST00000595231 MSANTD4Q8NCY6 345 aa23.66■■□□□ 1.38
SNRNP70-204ENST00000595231 MYADMQ96S97 322 aa23.66■■□□□ 1.38
SNRNP70-204ENST00000595231 CLIC5Q9NZA1 410 aa23.66■■□□□ 1.38
SNRNP70-204ENST00000595231 OAS1P00973 400 aaKnown RBP23.65■■□□□ 1.38
SNRNP70-204ENST00000595231 C1QBPQ07021 282 aaKnown RBP23.65■■□□□ 1.38
SNRNP70-204ENST00000595231 GPR158Q5T848 1215 aa23.65■■□□□ 1.38
SNRNP70-204ENST00000595231 BSPRYQ5W0U4 402 aa23.65■■□□□ 1.38
SNRNP70-204ENST00000595231 OR6B2Q6IFH4 312 aa23.65■■□□□ 1.38
SNRNP70-204ENST00000595231 ALKBH5Q6P6C2 394 aaKnown RBP23.65■■□□□ 1.38
SNRNP70-204ENST00000595231 ARHGAP18Q8N392 663 aa23.65■■□□□ 1.38
SNRNP70-204ENST00000595231 MAB21L3Q8N8X9 362 aa23.65■■□□□ 1.38
SNRNP70-204ENST00000595231 ANP32BQ92688 251 aaKnown RBP23.65■■□□□ 1.38
SNRNP70-204ENST00000595231 MCRS1Q96EZ8 462 aa23.65■■□□□ 1.38
SNRNP70-204ENST00000595231 SLC22A12Q96S37 553 aa23.65■■□□□ 1.38
SNRNP70-204ENST00000595231 PHF7Q9BWX1 381 aaPredicted RBP23.65■■□□□ 1.38
SNRNP70-204ENST00000595231 DEF6Q9H4E7 631 aa23.65■■□□□ 1.38
SNRNP70-204ENST00000595231 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.65■■□□□ 1.38
SNRNP70-204ENST00000595231 CDH7Q9ULB5 785 aa23.65■■□□□ 1.38
SNRNP70-204ENST00000595231 SOBPA7XYQ1 873 aa23.64■■□□□ 1.38
SNRNP70-204ENST00000595231 SART1O43290 800 aaKnown RBP23.64■■□□□ 1.38
SNRNP70-204ENST00000595231 FYNP06241 537 aa23.64■■□□□ 1.38
SNRNP70-204ENST00000595231 SLC6A3Q01959 620 aa23.64■■□□□ 1.38
SNRNP70-204ENST00000595231 ZNF268Q14587 947 aaPredicted RBP23.64■■□□□ 1.38
SNRNP70-204ENST00000595231 AAK1Q2M2I8 961 aa23.64■■□□□ 1.38
SNRNP70-204ENST00000595231 PPP1R2P3Q6NXS1 205 aa23.64■■□□□ 1.38
SNRNP70-204ENST00000595231 TMTC1Q8IUR5 882 aa23.64■■□□□ 1.38
SNRNP70-204ENST00000595231 ZNF276Q8N554 614 aa23.64■■□□□ 1.38
SNRNP70-204ENST00000595231 ATXN2LQ8WWM7 1075 aaKnown RBP23.64■■□□□ 1.38
SNRNP70-204ENST00000595231 VCPIP1Q96JH7 1222 aa23.64■■□□□ 1.38
SNRNP70-204ENST00000595231 CYP2S1Q96SQ9 504 aa23.64■■□□□ 1.38
SNRNP70-204ENST00000595231 BAG1Q99933 345 aaPredicted RBP23.64■■□□□ 1.38
SNRNP70-204ENST00000595231 RNF38Q9H0F5 515 aa23.64■■□□□ 1.38
SNRNP70-204ENST00000595231 TASP1Q9H6P5 420 aa23.64■■□□□ 1.38
SNRNP70-204ENST00000595231 CCSER2Q9H7U1 834 aa23.64■■□□□ 1.38
SNRNP70-204ENST00000595231 SPTLC3Q9NUV7 552 aa23.64■■□□□ 1.38
SNRNP70-204ENST00000595231 GDE1Q9NZC3 331 aa23.64■■□□□ 1.38
SNRNP70-204ENST00000595231 AKR1B10O60218 316 aa23.64■■□□□ 1.37
SNRNP70-204ENST00000595231 LTFP02788 710 aa23.64■■□□□ 1.37
SNRNP70-204ENST00000595231 DDX6P26196 483 aaKnown RBP eCLIP23.64■■□□□ 1.371e-8■■□□□ 14.4
SNRNP70-204ENST00000595231 TUBP50607 506 aa23.64■■□□□ 1.37
SNRNP70-204ENST00000595231 GSCP56915 257 aaPredicted RBP23.64■■□□□ 1.37
SNRNP70-204ENST00000595231 ARHGAP15Q53QZ3 475 aa23.64■■□□□ 1.37
SNRNP70-204ENST00000595231 CCDC122Q5T0U0 273 aa23.64■■□□□ 1.37
SNRNP70-204ENST00000595231 FAM50BQ9Y247 325 aa23.64■■□□□ 1.37
SNRNP70-204ENST00000595231 USTQ9Y2C2 406 aa23.64■■□□□ 1.37
SNRNP70-204ENST00000595231 SOWAHDA6NJG2 315 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms