RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 E9PBE3 544 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 DNALI1O14645 258 aaPredicted RBP12.73□□□□□ -0.37
LIG1-207ENST00000594759 SERPINI2O75830 405 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 CD19P15391 556 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 VAMP7P51809 220 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 TPTEP56180 551 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 FAAH2Q6GMR7 532 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 KYQ8NBH2 561 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 PNPLA3Q9NST1 481 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 ANGPTL3Q9Y5C1 460 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 C16orf96A6NNT2 1141 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 GAS7O60861 476 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 ZMPSTE24O75844 475 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 ENO2P09104 434 aaPredicted RBP12.73□□□□□ -0.37
LIG1-207ENST00000594759 HOXA13P31271 388 aaPredicted RBP12.73□□□□□ -0.37
LIG1-207ENST00000594759 EFTUD2Q15029 972 aaKnown RBP eCLIP12.73□□□□□ -0.371e-6■■■■■ 30.3
LIG1-207ENST00000594759 EPHA7Q15375 998 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 PPIL6Q8IXY8 311 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 ADCY4Q8NFM4 1077 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 GABPB2Q8TAK5 448 aaPredicted RBP12.73□□□□□ -0.37
LIG1-207ENST00000594759 SYBUQ9NX95 663 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 RABL2AQ9UBK7 228 aaPredicted RBP12.73□□□□□ -0.37
LIG1-207ENST00000594759 GRID1Q9ULK0 1009 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 STXBP5LQ9Y2K9 1186 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 HEY1Q9Y5J3 304 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 KPNA7A9QM74 516 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 IDH3BO43837 385 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 CRTAMO95727 393 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 ATP5BP06576 529 aaKnown RBP12.73□□□□□ -0.37
LIG1-207ENST00000594759 SERPINA6P08185 405 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 STX1BP61266 288 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 SLC2A7Q6PXP3 512 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 ZCCHC23Q6ZST2 131 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 ZNF408Q9H9D4 720 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 PI4KBQ9UBF8 816 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 ZC3H7BQ9UGR2 993 aaKnown RBP12.73□□□□□ -0.37
LIG1-207ENST00000594759 TEKT2Q9UIF3 430 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 TMEM98Q9Y2Y6 226 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 PCDHB4Q9Y5E5 795 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 NCANO14594 1321 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 FUOMA2VDF0 154 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 TMEM221A6NGB7 291 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 UGT1A9O60656 530 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 UGT1A6P19224 532 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 UGT1A1P22309 533 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 UGT1A4P22310 534 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 TYK2P29597 1187 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 UGT1A3P35503 534 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 UGT1A5P35504 534 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 ZNF829Q3KNS6 432 aaPredicted RBP12.73□□□□□ -0.37
LIG1-207ENST00000594759 EPC2Q52LR7 807 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 C2CD6Q53TS8 623 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 RCOR2Q8IZ40 523 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 BBS5Q8N3I7 341 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 KCTD6Q8NC69 237 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 ZSCAN18Q8TBC5 510 aaPredicted RBP12.73□□□□□ -0.37
LIG1-207ENST00000594759 CCDC17Q96LX7 622 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 DEPDC7Q96QD5 511 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 UGT1A7Q9HAW7 530 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 UGT1A10Q9HAW8 530 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 UGT1A8Q9HAW9 530 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 PLK2Q9NYY3 685 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 HACD3Q9P035 362 aa12.73□□□□□ -0.37
LIG1-207ENST00000594759 ADAMTS3O15072 1205 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 MAGEB2O15479 319 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 PHGDHO43175 533 aaKnown RBP12.72□□□□□ -0.37
LIG1-207ENST00000594759 TGDSO95455 350 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 CPA3P15088 417 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 CCNA2P20248 432 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 PKNOX1P55347 436 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 TUBA1BP68363 451 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 WASHC5Q12768 1159 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 TUBA1AQ71U36 451 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 DAGLBQ8NCG7 672 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 FNIP1Q8TF40 1166 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 SLC35C1Q96A29 364 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 CNDP1Q96KN2 507 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 CEP19Q96LK0 163 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 HNRNPABQ99729 332 aaKnown RBP12.72□□□□□ -0.37
LIG1-207ENST00000594759 EHD1Q9H4M9 534 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 ZNF277Q9NRM2 450 aaPredicted RBP12.72□□□□□ -0.37
LIG1-207ENST00000594759 THAP1Q9NVV9 213 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 COPG2Q9UBF2 871 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 SUN2Q9UH99 717 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 J3QRK9 145 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 ITM2AO43736 263 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 ALOX5P09917 674 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 CYP2C9P11712 490 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 GZMAP12544 262 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 FGFR3P22607 806 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 ME2P23368 584 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 SSTR3P32745 418 aaPredicted RBP12.72□□□□□ -0.37
LIG1-207ENST00000594759 ECE1P42892 770 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 NLRP11P59045 1033 aaKnown RBP12.72□□□□□ -0.37
LIG1-207ENST00000594759 DAB2P98082 770 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 GRM1Q13255 1194 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 PTK2BQ14289 1009 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 NPY5RQ15761 445 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 CARTPTQ16568 116 aa12.72□□□□□ -0.37
LIG1-207ENST00000594759 XKR5Q6UX68 686 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms