RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 PTMAP06454 111 aaKnown RBP10.15□□□□□ -0.78
DDX39A-220ENST00000593008 USP17L7P0C7H9 530 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 HMGA1P17096 107 aaKnown RBP10.15□□□□□ -0.78
DDX39A-220ENST00000593008 ABCB4P21439 1286 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 TNFAIP3P21580 790 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 CDH5P33151 784 aaPredicted RBP10.15□□□□□ -0.78
DDX39A-220ENST00000593008 MAGEA11P43364 429 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 PLA2G4AP47712 749 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 BPIFB4P59827 614 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 CENPCQ03188 943 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 CCDC173Q0VFZ6 552 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 MAPK8IP2Q13387 824 aaPredicted RBP10.15□□□□□ -0.78
DDX39A-220ENST00000593008 MAPRE1Q15691 268 aaKnown RBP10.15□□□□□ -0.78
DDX39A-220ENST00000593008 STXBP5Q5T5C0 1151 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 TRNP1Q6NT89 227 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 MON1BQ7L1V2 547 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 CPNE8Q86YQ8 564 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 TMC8Q8IU68 726 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 C17orf53Q8N3J3 647 aaPredicted RBP10.15□□□□□ -0.78
DDX39A-220ENST00000593008 C8orf48Q96LL4 319 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 ZSWIM3Q96MP5 696 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 SLC4A5Q9BY07 1137 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 NUCKS1Q9H1E3 243 aaKnown RBP10.15□□□□□ -0.78
DDX39A-220ENST00000593008 NMUR1Q9HB89 426 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 ABCB6Q9NP58 842 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 ASAH2Q9NR71 780 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 ZNHIT6Q9NWK9 470 aaKnown RBP10.15□□□□□ -0.78
DDX39A-220ENST00000593008 OSER1Q9NX31 292 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 GMIPQ9P107 970 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 IGSF9Q9P2J2 1179 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 FBXL21Q9UKT6 434 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 KIAA1257Q9ULG3 409 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 PYCARDQ9ULZ3 195 aa10.15□□□□□ -0.78
DDX39A-220ENST00000593008 A0A1W2PRU2 124 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 ZNF197O14709 1029 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 AKR1B10O60218 316 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 MOSPD3O75425 235 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 ABL1P00519 1130 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 SETSIPP0DME0 302 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 RRM1P23921 792 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 TUFMP49411 452 aaKnown RBP10.14□□□□□ -0.79
DDX39A-220ENST00000593008 TKTL1P51854 596 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 GSDMDP57764 484 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 PITX1P78337 314 aaPredicted RBP10.14□□□□□ -0.79
DDX39A-220ENST00000593008 CYP4F8P98187 520 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 CDK17Q00537 523 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 TEAD2Q15562 447 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 RAB6CQ53S08 254 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 RAB41Q5JT25 222 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 CCDC122Q5T0U0 273 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 VSTM1Q6UX27 236 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 DNAJB7Q7Z6W7 309 aaPredicted RBP10.14□□□□□ -0.79
DDX39A-220ENST00000593008 TMEM150AQ86TG1 271 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 ZNF677Q86XU0 584 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 SCUBE3Q8IX30 993 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 TMEM35BQ8NCS4 154 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 SHKBP1Q8TBC3 707 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 C2orf15Q8WU43 125 aaKnown RBP10.14□□□□□ -0.79
DDX39A-220ENST00000593008 ANP32BQ92688 251 aaKnown RBP10.14□□□□□ -0.79
DDX39A-220ENST00000593008 PPP1R13BQ96KQ4 1090 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 LRRC3Q9BY71 257 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 ADAM33Q9BZ11 813 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 TRIM7Q9C029 511 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 RAB6CQ9H0N0 254 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 LHX5Q9H2C1 402 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 DEF6Q9H4E7 631 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 SLITRK6Q9H5Y7 841 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 IL21Q9HBE4 155 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 TRIM10Q9UDY6 481 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 NAGPAQ9UK23 515 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 NUDT5Q9UKK9 219 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 DUSP12Q9UNI6 340 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 ZFP37Q9Y6Q3 630 aaPredicted RBP10.14□□□□□ -0.79
DDX39A-220ENST00000593008 MYH10P35580 1976 aa10.14□□□□□ -0.79
DDX39A-220ENST00000593008 GREB1Q4ZG55 1949 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 WDFY4Q6ZS81 3184 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 NOTCH4Q99466 2003 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 A0A1W2PQH9 124 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 SSU72P8A0A1W2PR75 194 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 YJEFN3A6XGL0 299 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 GOLGA6L6A8MZA4 724 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 E7ENQ6 273 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 TRIM66O15016 1216 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 MDM4O15151 490 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 NDUFA10O95299 355 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 LSM8O95777 96 aaKnown RBP10.13□□□□□ -0.79
DDX39A-220ENST00000593008 SRFP11831 508 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 MMP8P22894 467 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 ANXA13P27216 316 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 NSFP46459 744 aaKnown RBP10.13□□□□□ -0.79
DDX39A-220ENST00000593008 RPL34P49207 117 aaKnown RBP10.13□□□□□ -0.79
DDX39A-220ENST00000593008 VCPP55072 806 aaKnown RBP10.13□□□□□ -0.79
DDX39A-220ENST00000593008 GPC5P78333 572 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 TAF10Q12962 218 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 VEPH1Q14D04 833 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 STILQ15468 1287 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 TAF12Q16514 161 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 SLC18A3Q16572 532 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 FAM78AQ5JUQ0 283 aa10.13□□□□□ -0.79
DDX39A-220ENST00000593008 TANGO2Q6ICL3 276 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms