RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 KIAA2013Q8IYS2 634 aa15.7■□□□□ 0.1
SF3A2-207ENST00000592839 CAMKK1Q8N5S9 505 aa15.7■□□□□ 0.1
SF3A2-207ENST00000592839 GPR161Q8N6U8 529 aaKnown RBP15.7■□□□□ 0.1
SF3A2-207ENST00000592839 TMEM176AQ96HP8 235 aa15.7■□□□□ 0.1
SF3A2-207ENST00000592839 LINC00597Q9H2U6 94 aa15.7■□□□□ 0.1
SF3A2-207ENST00000592839 TLR8Q9NR97 1041 aaKnown RBP15.7■□□□□ 0.1
SF3A2-207ENST00000592839 FAM49BQ9NUQ9 324 aa15.7■□□□□ 0.1
SF3A2-207ENST00000592839 GMIPQ9P107 970 aa15.7■□□□□ 0.1
SF3A2-207ENST00000592839 SMG5Q9UPR3 1016 aaKnown RBP15.7■□□□□ 0.1
SF3A2-207ENST00000592839 MYOFQ9NZM1 2061 aa15.7■□□□□ 0.1
SF3A2-207ENST00000592839 BICDL2A1A5D9 508 aa15.69■□□□□ 0.1
SF3A2-207ENST00000592839 TLR5O60602 858 aa15.69■□□□□ 0.1
SF3A2-207ENST00000592839 EGFP01133 1207 aa15.69■□□□□ 0.1
SF3A2-207ENST00000592839 TGM1P22735 817 aa15.69■□□□□ 0.1
SF3A2-207ENST00000592839 TBXAS1P24557 533 aaPredicted RBP15.69■□□□□ 0.1
SF3A2-207ENST00000592839 FMO5P49326 533 aa15.69■□□□□ 0.1
SF3A2-207ENST00000592839 UBE2HP62256 183 aa15.69■□□□□ 0.1
SF3A2-207ENST00000592839 CUL2Q13617 745 aa15.69■□□□□ 0.1
SF3A2-207ENST00000592839 DHCR24Q15392 516 aa15.69■□□□□ 0.1
SF3A2-207ENST00000592839 HSF5Q4G112 596 aaPredicted RBP15.69■□□□□ 0.1
SF3A2-207ENST00000592839 PKN3Q6P5Z2 889 aa15.69■□□□□ 0.1
SF3A2-207ENST00000592839 CLEC17AQ6ZS10 378 aa15.69■□□□□ 0.1
SF3A2-207ENST00000592839 HTR3DQ70Z44 454 aa15.69■□□□□ 0.1
SF3A2-207ENST00000592839 TRIM59Q8IWR1 403 aa15.69■□□□□ 0.1
SF3A2-207ENST00000592839 ETFBKMTQ8IXQ9 262 aa15.69■□□□□ 0.1
SF3A2-207ENST00000592839 SCML4Q8N228 414 aa15.69■□□□□ 0.1
SF3A2-207ENST00000592839 PHTF2Q8N3S3 785 aa15.69■□□□□ 0.1
SF3A2-207ENST00000592839 TTC8Q8TAM2 541 aa15.69■□□□□ 0.1
SF3A2-207ENST00000592839 LMO3Q8TAP4 145 aa15.69■□□□□ 0.1
SF3A2-207ENST00000592839 ERCC4Q92889 916 aaPredicted RBP15.69■□□□□ 0.1
SF3A2-207ENST00000592839 EEF2KMTQ96G04 330 aa15.69■□□□□ 0.1
SF3A2-207ENST00000592839 ARID3AQ99856 593 aa15.69■□□□□ 0.1
SF3A2-207ENST00000592839 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.69■□□□□ 0.13e-7■□□□□ 8.5
SF3A2-207ENST00000592839 C2orf42Q9NWW7 574 aa15.69■□□□□ 0.1
SF3A2-207ENST00000592839 MARK1Q9P0L2 795 aa15.69■□□□□ 0.1
SF3A2-207ENST00000592839 PLXND1Q9Y4D7 1925 aa15.68■□□□□ 0.1
SF3A2-207ENST00000592839 ATG2BQ96BY7 2078 aa15.68■□□□□ 0.1
SF3A2-207ENST00000592839 RNF40O75150 1001 aa15.68■□□□□ 0.1
SF3A2-207ENST00000592839 GADD45BO75293 160 aaPredicted RBP15.68■□□□□ 0.1
SF3A2-207ENST00000592839 GNA14O95837 355 aa15.68■□□□□ 0.1
SF3A2-207ENST00000592839 MBL2P11226 248 aaPredicted RBP15.68■□□□□ 0.1
SF3A2-207ENST00000592839 PGFP49763 221 aa15.68■□□□□ 0.1
SF3A2-207ENST00000592839 ORC1Q13415 861 aa15.68■□□□□ 0.1
SF3A2-207ENST00000592839 PKDCCQ504Y2 493 aa15.68■□□□□ 0.1
SF3A2-207ENST00000592839 PM20D1Q6GTS8 502 aa15.68■□□□□ 0.1
SF3A2-207ENST00000592839 RHBDF2Q6PJF5 856 aa15.68■□□□□ 0.1
SF3A2-207ENST00000592839 ANKRD52Q8NB46 1076 aa15.68■□□□□ 0.1
SF3A2-207ENST00000592839 ACDQ96AP0 544 aa15.68■□□□□ 0.1
SF3A2-207ENST00000592839 CDK5RAP1Q96SZ6 601 aaKnown RBP15.68■□□□□ 0.1
SF3A2-207ENST00000592839 KLF16Q9BXK1 252 aaPredicted RBP15.68■□□□□ 0.1
SF3A2-207ENST00000592839 CCSER2Q9H7U1 834 aa15.68■□□□□ 0.1
SF3A2-207ENST00000592839 OSER1Q9NX31 292 aa15.68■□□□□ 0.1
SF3A2-207ENST00000592839 CFAP97Q9P2B7 532 aa15.68■□□□□ 0.1
SF3A2-207ENST00000592839 EBF1Q9UH73 591 aa15.68■□□□□ 0.1
SF3A2-207ENST00000592839 CHORDC1Q9UHD1 332 aaPredicted RBP15.68■□□□□ 0.1
SF3A2-207ENST00000592839 KIAA1257Q9ULG3 409 aa15.68■□□□□ 0.1
SF3A2-207ENST00000592839 ADH1CP00326 375 aa15.67■□□□□ 0.1
SF3A2-207ENST00000592839 CD58P19256 250 aa15.67■□□□□ 0.1
SF3A2-207ENST00000592839 YWHAEP62258 255 aaKnown RBP15.67■□□□□ 0.1
SF3A2-207ENST00000592839 GCNT1Q02742 428 aa15.67■□□□□ 0.1
SF3A2-207ENST00000592839 PUM1Q14671 1186 aaKnown RBP eCLIP15.67■□□□□ 0.15e-7■□□□□ 8.4
SF3A2-207ENST00000592839 DCAF17Q5H9S7 520 aaPredicted RBP15.67■□□□□ 0.1
SF3A2-207ENST00000592839 NAIF1Q69YI7 327 aaPredicted RBP15.67■□□□□ 0.1
SF3A2-207ENST00000592839 LAIR1Q6GTX8 287 aa15.67■□□□□ 0.1
SF3A2-207ENST00000592839 Q6ZNB5 142 aa15.67■□□□□ 0.1
SF3A2-207ENST00000592839 KCNV2Q8TDN2 545 aa15.67■□□□□ 0.1
SF3A2-207ENST00000592839 TATDN2Q93075 761 aa15.67■□□□□ 0.1
SF3A2-207ENST00000592839 JAKMIP2Q96AA8 810 aa15.67■□□□□ 0.1
SF3A2-207ENST00000592839 RMDN1Q96DB5 314 aa15.67■□□□□ 0.1
SF3A2-207ENST00000592839 NMUR1Q9HB89 426 aa15.67■□□□□ 0.1
SF3A2-207ENST00000592839 CHMP5Q9NZZ3 219 aa15.67■□□□□ 0.1
SF3A2-207ENST00000592839 CNTN6Q9UQ52 1028 aa15.67■□□□□ 0.1
SF3A2-207ENST00000592839 SPTBN2O15020 2390 aa15.67■□□□□ 0.1
SF3A2-207ENST00000592839 MYO18AQ92614 2054 aaKnown RBP15.66■□□□□ 0.1
SF3A2-207ENST00000592839 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.66■□□□□ 0.1
SF3A2-207ENST00000592839 K7EQS6 105 aa15.66■□□□□ 0.1
SF3A2-207ENST00000592839 XPO1O14980 1071 aaKnown RBP15.66■□□□□ 0.1
SF3A2-207ENST00000592839 CYP26A1O43174 497 aa15.66■□□□□ 0.1
SF3A2-207ENST00000592839 PAEPP09466 180 aa15.66■□□□□ 0.1
SF3A2-207ENST00000592839 ACO1P21399 889 aaKnown RBP15.66■□□□□ 0.1
SF3A2-207ENST00000592839 ADORA2BP29275 332 aa15.66■□□□□ 0.1
SF3A2-207ENST00000592839 ATP5C1P36542 298 aaKnown RBP15.66■□□□□ 0.1
SF3A2-207ENST00000592839 PLA2G4AP47712 749 aa15.66■□□□□ 0.1
SF3A2-207ENST00000592839 MRPS21P82921 87 aaKnown RBP15.66■□□□□ 0.1
SF3A2-207ENST00000592839 DMWDQ09019 674 aa15.66■□□□□ 0.1
SF3A2-207ENST00000592839 PAK1Q13153 545 aa15.66■□□□□ 0.1
SF3A2-207ENST00000592839 MEA1Q16626 185 aa15.66■□□□□ 0.1
SF3A2-207ENST00000592839 TCERG1LQ5VWI1 586 aa15.66■□□□□ 0.1
SF3A2-207ENST00000592839 DGLUCYQ7Z3D6 616 aa15.66■□□□□ 0.1
SF3A2-207ENST00000592839 SCD5Q86SK9 330 aa15.66■□□□□ 0.1
SF3A2-207ENST00000592839 TADA2BQ86TJ2 420 aa15.66■□□□□ 0.1
SF3A2-207ENST00000592839 RASSF3Q86WH2 238 aa15.66■□□□□ 0.1
SF3A2-207ENST00000592839 TTC30AQ86WT1 665 aa15.66■□□□□ 0.1
SF3A2-207ENST00000592839 DCLK2Q8N568 766 aa15.66■□□□□ 0.1
SF3A2-207ENST00000592839 USP33Q8TEY7 942 aa15.66■□□□□ 0.1
SF3A2-207ENST00000592839 NELFBQ8WX92 580 aa15.66■□□□□ 0.1
SF3A2-207ENST00000592839 LOXL4Q96JB6 756 aa15.66■□□□□ 0.1
SF3A2-207ENST00000592839 MMRN2Q9H8L6 949 aa15.66■□□□□ 0.1
SF3A2-207ENST00000592839 SMPD4Q9NXE4 827 aa15.66■□□□□ 0.1
SF3A2-207ENST00000592839 KIAA1468Q9P260 1216 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms