RNA–Protein interactions for RNA: ENST00000592776.1

PTPN2-215, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 5

Gene PTPN2, Length 772 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-215ENST00000592776 DDX42Q86XP3 938 aaKnown RBP eCLIP23.24■■□□□ 1.31
PTPN2-215ENST00000592776 BBS7Q8IWZ6 715 aa23.24■■□□□ 1.31
PTPN2-215ENST00000592776 CCDC33Q8N5R6 958 aa23.24■■□□□ 1.31
PTPN2-215ENST00000592776 CCDC150Q8NCX0 1101 aa23.24■■□□□ 1.31
PTPN2-215ENST00000592776 USP33Q8TEY7 942 aa23.24■■□□□ 1.31
PTPN2-215ENST00000592776 GAB3Q8WWW8 586 aa23.24■■□□□ 1.31
PTPN2-215ENST00000592776 SMARCE1Q969G3 411 aa23.24■■□□□ 1.31
PTPN2-215ENST00000592776 GSDMAQ96QA5 445 aa23.24■■□□□ 1.31
PTPN2-215ENST00000592776 RAB20Q9NX57 234 aa23.24■■□□□ 1.31
PTPN2-215ENST00000592776 DLL3Q9NYJ7 618 aa23.24■■□□□ 1.31
PTPN2-215ENST00000592776 SH3BP1Q9Y3L3 701 aa23.24■■□□□ 1.31
PTPN2-215ENST00000592776 MYOFQ9NZM1 2061 aa23.24■■□□□ 1.31
PTPN2-215ENST00000592776 E2F8A0AVK6 867 aa23.23■■□□□ 1.31
PTPN2-215ENST00000592776 MDM4O15151 490 aa23.23■■□□□ 1.31
PTPN2-215ENST00000592776 TLR5O60602 858 aa23.23■■□□□ 1.31
PTPN2-215ENST00000592776 DCAF17Q5H9S7 520 aaPredicted RBP23.23■■□□□ 1.31
PTPN2-215ENST00000592776 EMC10Q5UCC4 262 aa23.23■■□□□ 1.31
PTPN2-215ENST00000592776 TCERG1LQ5VWI1 586 aa23.23■■□□□ 1.31
PTPN2-215ENST00000592776 GPR161Q8N6U8 529 aaKnown RBP23.23■■□□□ 1.31
PTPN2-215ENST00000592776 NAT16Q8N8M0 369 aa23.23■■□□□ 1.31
PTPN2-215ENST00000592776 FBXL13Q8NEE6 735 aa23.23■■□□□ 1.31
PTPN2-215ENST00000592776 SPATA20Q8TB22 786 aa23.23■■□□□ 1.31
PTPN2-215ENST00000592776 NACA2Q9H009 215 aa23.23■■□□□ 1.31
PTPN2-215ENST00000592776 FBXO44Q9H4M3 255 aa23.23■■□□□ 1.31
PTPN2-215ENST00000592776 ZDHHC4Q9NPG8 344 aa23.23■■□□□ 1.31
PTPN2-215ENST00000592776 KIAA1549LQ6ZVL6 1849 aa23.23■■□□□ 1.31
PTPN2-215ENST00000592776 A0A1W2PQH9 124 aa23.22■■□□□ 1.31
PTPN2-215ENST00000592776 AXIN1O15169 862 aa23.22■■□□□ 1.31
PTPN2-215ENST00000592776 RPP40O75818 363 aaKnown RBP23.22■■□□□ 1.31
PTPN2-215ENST00000592776 SMC2O95347 1197 aa23.22■■□□□ 1.31
PTPN2-215ENST00000592776 ADH5P11766 374 aa23.22■■□□□ 1.31
PTPN2-215ENST00000592776 CD44P16070 742 aaKnown RBP23.22■■□□□ 1.31
PTPN2-215ENST00000592776 TUBP50607 506 aa23.22■■□□□ 1.31
PTPN2-215ENST00000592776 KDSRQ06136 332 aa23.22■■□□□ 1.31
PTPN2-215ENST00000592776 PUM1Q14671 1186 aaKnown RBP eCLIP23.22■■□□□ 1.31
PTPN2-215ENST00000592776 CCDC6Q16204 474 aa23.22■■□□□ 1.31
PTPN2-215ENST00000592776 ERMP1Q7Z2K6 904 aa23.22■■□□□ 1.31
PTPN2-215ENST00000592776 DGLUCYQ7Z3D6 616 aa23.22■■□□□ 1.31
PTPN2-215ENST00000592776 ZC3H3Q8IXZ2 948 aaKnown RBP23.22■■□□□ 1.31
PTPN2-215ENST00000592776 CAMKK1Q8N5S9 505 aa23.22■■□□□ 1.31
PTPN2-215ENST00000592776 KIAA1958Q8N8K9 716 aa23.22■■□□□ 1.31
PTPN2-215ENST00000592776 HEXIM2Q96MH2 286 aaKnown RBP23.22■■□□□ 1.31
PTPN2-215ENST00000592776 PNKPQ96T60 521 aa23.22■■□□□ 1.31
PTPN2-215ENST00000592776 TSG101Q99816 390 aa23.22■■□□□ 1.31
PTPN2-215ENST00000592776 KLF16Q9BXK1 252 aaPredicted RBP23.22■■□□□ 1.31
PTPN2-215ENST00000592776 TLR8Q9NR97 1041 aaKnown RBP23.22■■□□□ 1.31
PTPN2-215ENST00000592776 CISHQ9NSE2 258 aa23.22■■□□□ 1.31
PTPN2-215ENST00000592776 SEMA4GQ9NTN9 838 aa23.22■■□□□ 1.31
PTPN2-215ENST00000592776 TBC1D14Q9P2M4 693 aa23.22■■□□□ 1.31
PTPN2-215ENST00000592776 SCML2Q9UQR0 700 aa23.22■■□□□ 1.31
PTPN2-215ENST00000592776 INVSQ9Y283 1065 aa23.22■■□□□ 1.31
PTPN2-215ENST00000592776 DCLK1O15075 740 aa23.21■■□□□ 1.31
PTPN2-215ENST00000592776 CCDC192P0DO97 292 aa23.21■■□□□ 1.31
PTPN2-215ENST00000592776 RAD23BP54727 409 aa23.21■■□□□ 1.31
PTPN2-215ENST00000592776 COBLL1Q53SF7 1204 aa23.21■■□□□ 1.31
PTPN2-215ENST00000592776 TMEM25Q86YD3 366 aa23.21■■□□□ 1.31
PTPN2-215ENST00000592776 SLC4A11Q8NBS3 891 aa23.21■■□□□ 1.31
PTPN2-215ENST00000592776 MAN1B1Q9UKM7 699 aa23.21■■□□□ 1.31
PTPN2-215ENST00000592776 EML5Q05BV3 1969 aa23.21■■□□□ 1.31
PTPN2-215ENST00000592776 CCDC163A0A0D9SF12 145 aa23.2■■□□□ 1.3
PTPN2-215ENST00000592776 MED19A0JLT2 244 aaPredicted RBP23.2■■□□□ 1.3
PTPN2-215ENST00000592776 GREM1O60565 184 aa23.2■■□□□ 1.3
PTPN2-215ENST00000592776 GADD45BO75293 160 aaPredicted RBP23.2■■□□□ 1.3
PTPN2-215ENST00000592776 ADH1CP00326 375 aa23.2■■□□□ 1.3
PTPN2-215ENST00000592776 CHRM1P11229 460 aaPredicted RBP23.2■■□□□ 1.3
PTPN2-215ENST00000592776 HNRNPLP14866 589 aaKnown RBP eCLIP23.2■■□□□ 1.3
PTPN2-215ENST00000592776 ATXN1P54253 815 aaKnown RBP23.2■■□□□ 1.3
PTPN2-215ENST00000592776 FKBP3Q00688 224 aaKnown RBP23.2■■□□□ 1.3
PTPN2-215ENST00000592776 SCD5Q86SK9 330 aa23.2■■□□□ 1.3
PTPN2-215ENST00000592776 ACDQ96AP0 544 aa23.2■■□□□ 1.3
PTPN2-215ENST00000592776 TIGD1Q96MW7 591 aa23.2■■□□□ 1.3
PTPN2-215ENST00000592776 DUSP16Q9BY84 665 aa23.2■■□□□ 1.3
PTPN2-215ENST00000592776 ARRDC1-AS1Q9H2J1 176 aa23.2■■□□□ 1.3
PTPN2-215ENST00000592776 ARHGEF4Q9NR80 690 aa23.2■■□□□ 1.3
PTPN2-215ENST00000592776 TRIM24O15164 1050 aa23.19■■□□□ 1.3
PTPN2-215ENST00000592776 KAT7O95251 611 aa23.19■■□□□ 1.3
PTPN2-215ENST00000592776 APBB3O95704 486 aa23.19■■□□□ 1.3
PTPN2-215ENST00000592776 RARGP13631 454 aa23.19■■□□□ 1.3
PTPN2-215ENST00000592776 TRIM21P19474 475 aaKnown RBP23.19■■□□□ 1.3
PTPN2-215ENST00000592776 TIE1P35590 1138 aa23.19■■□□□ 1.3
PTPN2-215ENST00000592776 ATP5C1P36542 298 aaKnown RBP23.19■■□□□ 1.3
PTPN2-215ENST00000592776 DGKEP52429 567 aa23.19■■□□□ 1.3
PTPN2-215ENST00000592776 KIF11P52732 1056 aa23.19■■□□□ 1.3
PTPN2-215ENST00000592776 LMNB2Q03252 620 aa23.19■■□□□ 1.3
PTPN2-215ENST00000592776 GAD2Q05329 585 aa23.19■■□□□ 1.3
PTPN2-215ENST00000592776 CACNA2D4Q7Z3S7 1137 aa23.19■■□□□ 1.3
PTPN2-215ENST00000592776 PHTF2Q8N3S3 785 aa23.19■■□□□ 1.3
PTPN2-215ENST00000592776 ALLCQ8N6M5 410 aa23.19■■□□□ 1.3
PTPN2-215ENST00000592776 TMEM176AQ96HP8 235 aa23.19■■□□□ 1.3
PTPN2-215ENST00000592776 TPSD1Q9BZJ3 242 aa23.19■■□□□ 1.3
PTPN2-215ENST00000592776 CYLDQ9NQC7 956 aa23.19■■□□□ 1.3
PTPN2-215ENST00000592776 SLC16A3O15427 465 aaKnown RBP23.18■■□□□ 1.3
PTPN2-215ENST00000592776 GDF9O60383 454 aa23.18■■□□□ 1.3
PTPN2-215ENST00000592776 STX10O60499 249 aa23.18■■□□□ 1.3
PTPN2-215ENST00000592776 APODP05090 189 aa23.18■■□□□ 1.3
PTPN2-215ENST00000592776 LRMPQ12912 555 aa23.18■■□□□ 1.3
PTPN2-215ENST00000592776 ANO4Q32M45 955 aa23.18■■□□□ 1.3
PTPN2-215ENST00000592776 TMEM92Q6UXU6 159 aa23.18■■□□□ 1.3
PTPN2-215ENST00000592776 TSTD1Q8NFU3 115 aa23.18■■□□□ 1.3
PTPN2-215ENST00000592776 SMOC1Q9H4F8 434 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms