RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 PCDHGB2Q9Y5G2 931 aa4.1□□□□□ -1.75
VMP1-212ENST00000591782 TTC36A6NLP5 189 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 AP4M1O00189 453 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 PSMD9O00233 223 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 C1QL1O75973 258 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 NPSP0C0P6 89 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 GABRB3P28472 473 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 GKP32189 559 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 COPAP53621 1224 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 E2F1Q01094 437 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 GORABQ5T7V8 394 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 STRIP1Q5VSL9 837 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 TAF3Q5VWG9 929 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 MZT2AQ6P582 158 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 USP49Q70CQ1 688 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 MORC1Q86VD1 984 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 C11orf44Q8N8P7 122 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 FAM98AQ8NCA5 519 aaKnown RBP4.09□□□□□ -1.75
VMP1-212ENST00000591782 CCDC150Q8NCX0 1101 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 DEPTORQ8TB45 409 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 ZNF566Q969W8 418 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 ZG16BQ96DA0 208 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 LENG8Q96PV6 779 aaPredicted RBP4.09□□□□□ -1.75
VMP1-212ENST00000591782 HIST1H2AAQ96QV6 131 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 GDF15Q99988 308 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 FSD1LQ9BXM9 530 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 SLC25A32Q9H2D1 315 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 R3HDMLQ9H3Y0 253 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 SLITRK6Q9H5Y7 841 aa4.09□□□□□ -1.75
VMP1-212ENST00000591782 FAM234BA2RU67 622 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 EXOC5O00471 708 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 ZNF213O14771 459 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 KCNQ3O43525 872 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 PMPCBO75439 489 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 TJP3O95049 919 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 PDE8BO95263 885 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 IGLV2-14P01704 120 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 PRKCBP05771 671 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 HNRNPCP07910 306 aaKnown RBP eCLIP4.08□□□□□ -1.764e-19■■■□□ 18.9
VMP1-212ENST00000591782 DLDP09622 509 aaKnown RBP4.08□□□□□ -1.76
VMP1-212ENST00000591782 WT1P19544 449 aaPredicted RBP4.08□□□□□ -1.76
VMP1-212ENST00000591782 GPD1P21695 349 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 YY1P25490 414 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 EEF1GP26641 437 aaKnown RBP4.08□□□□□ -1.76
VMP1-212ENST00000591782 SSR1P43307 286 aaKnown RBP4.08□□□□□ -1.76
VMP1-212ENST00000591782 HSPA7P48741 367 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 INHBEP58166 350 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 BRD3Q15059 726 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 MPEG1Q2M385 716 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 AARS2Q5JTZ9 985 aaKnown RBP4.08□□□□□ -1.76
VMP1-212ENST00000591782 PCID2Q5JVF3 399 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 L1TD1Q5T7N2 865 aaKnown RBP4.08□□□□□ -1.76
VMP1-212ENST00000591782 WDR78Q5VTH9 848 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 FBXO42Q6P3S6 717 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 KIAA0408Q6ZU52 694 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 SLC29A4Q7RTT9 530 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 CCDC28AQ8IWP9 274 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 METTL25Q8N6Q8 603 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 BOLLQ8N9W6 283 aaKnown RBP4.08□□□□□ -1.76
VMP1-212ENST00000591782 GLIS1Q8NBF1 620 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 ABHD11Q8NFV4 315 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 SARAFQ96BY9 339 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 WDYHV1Q96HA8 205 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 SNX27Q96L92 541 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 BBC3Q96PG8 261 aaPredicted RBP4.08□□□□□ -1.76
VMP1-212ENST00000591782 MPHOSPH6Q99547 160 aaKnown RBP4.08□□□□□ -1.76
VMP1-212ENST00000591782 MACROD1Q9BQ69 325 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 PCDHAC1Q9H158 963 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 CENPJQ9HC77 1338 aaPredicted RBP4.08□□□□□ -1.76
VMP1-212ENST00000591782 C11orf21Q9P2W6 132 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 ARPP21Q9UBL0 812 aaPredicted RBP4.08□□□□□ -1.76
VMP1-212ENST00000591782 LPAR3Q9UBY5 353 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 ADAMTS5Q9UNA0 930 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 SLC27A6Q9Y2P4 619 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 CEP83Q9Y592 693 aa4.08□□□□□ -1.76
VMP1-212ENST00000591782 SPATA31A6Q5VVP1 1343 aa4.07□□□□□ -1.76
VMP1-212ENST00000591782 FANCIQ9NVI1 1328 aa4.07□□□□□ -1.76
VMP1-212ENST00000591782 LOC102724159A0A0B4J2E5 919 aa4.07□□□□□ -1.76
VMP1-212ENST00000591782 LRRC3CA6NJW4 275 aa4.07□□□□□ -1.76
VMP1-212ENST00000591782 PODXLO00592 558 aa4.07□□□□□ -1.76
VMP1-212ENST00000591782 CES2O00748 559 aa4.07□□□□□ -1.76
VMP1-212ENST00000591782 SPRY2O43597 315 aa4.07□□□□□ -1.76
VMP1-212ENST00000591782 SNX2O60749 519 aa4.07□□□□□ -1.76
VMP1-212ENST00000591782 COQ9O75208 318 aa4.07□□□□□ -1.76
VMP1-212ENST00000591782 ARP10275 920 aa4.07□□□□□ -1.76
VMP1-212ENST00000591782 FPR3P25089 353 aa4.07□□□□□ -1.76
VMP1-212ENST00000591782 MST1P26927 711 aa4.07□□□□□ -1.76
VMP1-212ENST00000591782 RBL1P28749 1068 aa4.07□□□□□ -1.76
VMP1-212ENST00000591782 HTR7P34969 479 aa4.07□□□□□ -1.76
VMP1-212ENST00000591782 HTR3AP46098 478 aa4.07□□□□□ -1.76
VMP1-212ENST00000591782 SUMO2P61956 95 aaKnown RBP4.07□□□□□ -1.76
VMP1-212ENST00000591782 CYP4F2P78329 520 aa4.07□□□□□ -1.76
VMP1-212ENST00000591782 PSG6Q00889 435 aa4.07□□□□□ -1.76
VMP1-212ENST00000591782 BTKQ06187 659 aa4.07□□□□□ -1.76
VMP1-212ENST00000591782 GPS1Q13098 491 aa4.07□□□□□ -1.76
VMP1-212ENST00000591782 FHL3Q13643 280 aa4.07□□□□□ -1.76
VMP1-212ENST00000591782 PWP2Q15269 919 aaKnown RBP4.07□□□□□ -1.76
VMP1-212ENST00000591782 SMN1Q16637 294 aaKnown RBP4.07□□□□□ -1.76
VMP1-212ENST00000591782 TBC1D25Q3MII6 688 aa4.07□□□□□ -1.76
VMP1-212ENST00000591782 DGKKQ5KSL6 1271 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms