RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 NAT16Q8N8M0 369 aa17.25■□□□□ 0.35
MBD3-206ENST00000589901 C12orf29Q8N999 325 aa17.25■□□□□ 0.35
MBD3-206ENST00000589901 SLC2A14Q8TDB8 520 aa17.25■□□□□ 0.35
MBD3-206ENST00000589901 TMEM174Q8WUU8 243 aa17.25■□□□□ 0.35
MBD3-206ENST00000589901 CHAMP1Q96JM3 812 aa17.25■□□□□ 0.35
MBD3-206ENST00000589901 EDEM2Q9BV94 578 aa17.25■□□□□ 0.35
MBD3-206ENST00000589901 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.25■□□□□ 0.35
MBD3-206ENST00000589901 SH3BP1Q9Y3L3 701 aa17.25■□□□□ 0.35
MBD3-206ENST00000589901 CNOT1A5YKK6 2376 aaKnown RBP17.25■□□□□ 0.35
MBD3-206ENST00000589901 MYO16Q9Y6X6 1858 aa17.24■□□□□ 0.35
MBD3-206ENST00000589901 KIAA1549LQ6ZVL6 1849 aa17.24■□□□□ 0.35
MBD3-206ENST00000589901 A0A0A0MRY4 1105 aa17.24■□□□□ 0.35
MBD3-206ENST00000589901 PDXKO00764 312 aa17.24■□□□□ 0.35
MBD3-206ENST00000589901 KRT37O76014 449 aa17.24■□□□□ 0.35
MBD3-206ENST00000589901 RPN1P04843 607 aaKnown RBP17.24■□□□□ 0.35
MBD3-206ENST00000589901 IRF1P10914 325 aa17.24■□□□□ 0.35
MBD3-206ENST00000589901 ASPAP45381 313 aa17.24■□□□□ 0.35
MBD3-206ENST00000589901 TUBP50607 506 aa17.24■□□□□ 0.35
MBD3-206ENST00000589901 MAP3K7CLP57077 242 aa17.24■□□□□ 0.35
MBD3-206ENST00000589901 GAD2Q05329 585 aa17.24■□□□□ 0.35
MBD3-206ENST00000589901 C1orf220Q5T0J3 134 aa17.24■□□□□ 0.35
MBD3-206ENST00000589901 CEP135Q66GS9 1140 aa17.24■□□□□ 0.35
MBD3-206ENST00000589901 BBS7Q8IWZ6 715 aa17.24■□□□□ 0.35
MBD3-206ENST00000589901 CRYBG2Q8N1P7 616 aa17.24■□□□□ 0.35
MBD3-206ENST00000589901 TMC2Q8TDI7 906 aa17.24■□□□□ 0.35
MBD3-206ENST00000589901 RLN3Q8WXF3 142 aa17.24■□□□□ 0.35
MBD3-206ENST00000589901 LSM14BQ9BX40 385 aaKnown RBP17.24■□□□□ 0.35
MBD3-206ENST00000589901 FAM49BQ9NUQ9 324 aa17.24■□□□□ 0.35
MBD3-206ENST00000589901 COMMD8Q9NX08 183 aa17.24■□□□□ 0.35
MBD3-206ENST00000589901 CACNA1BQ00975 2339 aa17.23■□□□□ 0.35
MBD3-206ENST00000589901 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.23■□□□□ 0.35
MBD3-206ENST00000589901 ADAM23O75077 832 aa17.23■□□□□ 0.35
MBD3-206ENST00000589901 ALDH1A2O94788 518 aa17.23■□□□□ 0.35
MBD3-206ENST00000589901 TBX18O95935 607 aa17.23■□□□□ 0.35
MBD3-206ENST00000589901 ASS1P00966 412 aaKnown RBP17.23■□□□□ 0.35
MBD3-206ENST00000589901 P4HA1P13674 534 aa17.23■□□□□ 0.35
MBD3-206ENST00000589901 CMA1P23946 247 aa17.23■□□□□ 0.35
MBD3-206ENST00000589901 TNFRSF4P43489 277 aa17.23■□□□□ 0.35
MBD3-206ENST00000589901 C11orf74Q86VG3 221 aa17.23■□□□□ 0.35
MBD3-206ENST00000589901 TMEM25Q86YD3 366 aa17.23■□□□□ 0.35
MBD3-206ENST00000589901 ETFBKMTQ8IXQ9 262 aa17.23■□□□□ 0.35
MBD3-206ENST00000589901 FRMD1Q8N878 549 aa17.23■□□□□ 0.35
MBD3-206ENST00000589901 OLIG1Q8TAK6 271 aa17.23■□□□□ 0.35
MBD3-206ENST00000589901 OTUB2Q96DC9 234 aa17.23■□□□□ 0.35
MBD3-206ENST00000589901 NACA2Q9H009 215 aa17.23■□□□□ 0.35
MBD3-206ENST00000589901 CSNK1G1Q9HCP0 422 aa17.23■□□□□ 0.35
MBD3-206ENST00000589901 CIZ1Q9ULV3 898 aaPredicted RBP17.23■□□□□ 0.35
MBD3-206ENST00000589901 HPSEQ9Y251 543 aa17.23■□□□□ 0.35
MBD3-206ENST00000589901 FRYQ5TBA9 3013 aa17.23■□□□□ 0.35
MBD3-206ENST00000589901 CEP295Q9C0D2 2601 aa17.22■□□□□ 0.35
MBD3-206ENST00000589901 LNP1A1A4G5 178 aa17.22■□□□□ 0.35
MBD3-206ENST00000589901 TBC1D3BA6NDS4 549 aa17.22■□□□□ 0.35
MBD3-206ENST00000589901 C4orf47A7E2U8 309 aa17.22■□□□□ 0.35
MBD3-206ENST00000589901 PATE3B3GLJ2 98 aa17.22■□□□□ 0.35
MBD3-206ENST00000589901 TRIM24O15164 1050 aa17.22■□□□□ 0.35
MBD3-206ENST00000589901 TULP3O75386 442 aa17.22■□□□□ 0.35
MBD3-206ENST00000589901 KCNK5O95279 499 aa17.22■□□□□ 0.35
MBD3-206ENST00000589901 HLA-DRAP01903 254 aa17.22■□□□□ 0.35
MBD3-206ENST00000589901 ADORA2BP29275 332 aa17.22■□□□□ 0.35
MBD3-206ENST00000589901 PIK3CAP42336 1068 aa17.22■□□□□ 0.35
MBD3-206ENST00000589901 DHPSP49366 369 aaPredicted RBP17.22■□□□□ 0.35
MBD3-206ENST00000589901 ANO4Q32M45 955 aa17.22■□□□□ 0.35
MBD3-206ENST00000589901 EOGTQ5NDL2 527 aa17.22■□□□□ 0.35
MBD3-206ENST00000589901 BTBD8Q5XKL5 378 aa17.22■□□□□ 0.35
MBD3-206ENST00000589901 GPRIN1Q7Z2K8 1008 aa17.22■□□□□ 0.35
MBD3-206ENST00000589901 CYP2U1Q7Z449 544 aa17.22■□□□□ 0.35
MBD3-206ENST00000589901 UNC93AQ86WB7 457 aa17.22■□□□□ 0.35
MBD3-206ENST00000589901 TAF4BQ92750 862 aa17.22■□□□□ 0.35
MBD3-206ENST00000589901 TWNKQ96RR1 684 aa17.22■□□□□ 0.35
MBD3-206ENST00000589901 POLMQ9NP87 494 aaPredicted RBP17.22■□□□□ 0.35
MBD3-206ENST00000589901 SPHK2Q9NRA0 654 aa17.22■□□□□ 0.35
MBD3-206ENST00000589901 BCCIPQ9P287 314 aaKnown RBP eCLIP17.22■□□□□ 0.35
MBD3-206ENST00000589901 FRMD4BQ9Y2L6 1034 aa17.22■□□□□ 0.35
MBD3-206ENST00000589901 IKBKBO14920 756 aa17.21■□□□□ 0.35
MBD3-206ENST00000589901 HOXC11O43248 304 aaPredicted RBP17.21■□□□□ 0.35
MBD3-206ENST00000589901 GREM1O60565 184 aa17.21■□□□□ 0.35
MBD3-206ENST00000589901 TLR5O60602 858 aa17.21■□□□□ 0.35
MBD3-206ENST00000589901 PRR29P0C7W0 189 aa17.21■□□□□ 0.35
MBD3-206ENST00000589901 FAM200BP0CF97 657 aa17.21■□□□□ 0.35
MBD3-206ENST00000589901 PMLP29590 882 aa17.21■□□□□ 0.35
MBD3-206ENST00000589901 P2RY2P41231 377 aa17.21■□□□□ 0.35
MBD3-206ENST00000589901 VAMP7P51809 220 aa17.21■□□□□ 0.35
MBD3-206ENST00000589901 HSF5Q4G112 596 aaPredicted RBP17.21■□□□□ 0.35
MBD3-206ENST00000589901 WHAMMQ8TF30 809 aa17.21■□□□□ 0.35
MBD3-206ENST00000589901 HMGB4Q8WW32 186 aa17.21■□□□□ 0.35
MBD3-206ENST00000589901 JAKMIP2Q96AA8 810 aa17.21■□□□□ 0.35
MBD3-206ENST00000589901 DUSP9Q99956 384 aaKnown RBP17.21■□□□□ 0.35
MBD3-206ENST00000589901 FBXO44Q9H4M3 255 aa17.21■□□□□ 0.35
MBD3-206ENST00000589901 APOBEC3GQ9HC16 384 aaKnown RBP17.21■□□□□ 0.35
MBD3-206ENST00000589901 OSER1Q9NX31 292 aa17.21■□□□□ 0.35
MBD3-206ENST00000589901 DEC1Q9P2X7 70 aa17.21■□□□□ 0.35
MBD3-206ENST00000589901 MAPK8IP1Q9UQF2 711 aa17.21■□□□□ 0.35
MBD3-206ENST00000589901 TRAF3IP3Q9Y228 551 aa17.21■□□□□ 0.35
MBD3-206ENST00000589901 ZFHX4Q86UP3 3567 aa17.2■□□□□ 0.34
MBD3-206ENST00000589901 MAP1BP46821 2468 aaKnown RBP17.2■□□□□ 0.34
MBD3-206ENST00000589901 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.2■□□□□ 0.34
MBD3-206ENST00000589901 TCRBV21S2A2A0A5A6 115 aa17.2■□□□□ 0.34
MBD3-206ENST00000589901 HHLA1C9JL84 531 aa17.2■□□□□ 0.34
MBD3-206ENST00000589901 KHNYNO15037 678 aaKnown RBP17.2■□□□□ 0.34
MBD3-206ENST00000589901 CYP26A1O43174 497 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms