RNA–Protein interactions for RNA: ENST00000589883.1

PTBP1-215, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-215ENST00000589883 TTC8Q8TAM2 541 aa20.52■□□□□ 0.88
PTBP1-215ENST00000589883 ABCB6Q9NP58 842 aa20.52■□□□□ 0.88
PTBP1-215ENST00000589883 FAM49BQ9NUQ9 324 aa20.52■□□□□ 0.88
PTBP1-215ENST00000589883 IFNKQ9P0W0 207 aa20.52■□□□□ 0.88
PTBP1-215ENST00000589883 FHOD1Q9Y613 1164 aa20.52■□□□□ 0.88
PTBP1-215ENST00000589883 DNAH14Q0VDD8 3507 aa20.52■□□□□ 0.88
PTBP1-215ENST00000589883 CHURC1-FNTBB4DL54 471 aa20.51■□□□□ 0.87
PTBP1-215ENST00000589883 CLDN5O00501 218 aa20.51■□□□□ 0.87
PTBP1-215ENST00000589883 ATG13O75143 517 aa20.51■□□□□ 0.87
PTBP1-215ENST00000589883 KRT5P13647 590 aa20.51■□□□□ 0.87
PTBP1-215ENST00000589883 CCDC130P13994 396 aa20.51■□□□□ 0.87
PTBP1-215ENST00000589883 FNTBP49356 437 aa20.51■□□□□ 0.87
PTBP1-215ENST00000589883 ATXN1P54253 815 aaKnown RBP20.51■□□□□ 0.87
PTBP1-215ENST00000589883 GRSF1Q12849 480 aaKnown RBP eCLIP20.51■□□□□ 0.87
PTBP1-215ENST00000589883 CCINQ13939 588 aa20.51■□□□□ 0.87
PTBP1-215ENST00000589883 LPAL2Q16609 132 aa20.51■□□□□ 0.87
PTBP1-215ENST00000589883 C4orf50Q6ZRC1 276 aa20.51■□□□□ 0.87
PTBP1-215ENST00000589883 ENOSF1Q7L5Y1 443 aa20.51■□□□□ 0.87
PTBP1-215ENST00000589883 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.51■□□□□ 0.87
PTBP1-215ENST00000589883 CRYBG2Q8N1P7 616 aa20.51■□□□□ 0.87
PTBP1-215ENST00000589883 SLC4A11Q8NBS3 891 aa20.51■□□□□ 0.87
PTBP1-215ENST00000589883 TMEM176AQ96HP8 235 aa20.51■□□□□ 0.87
PTBP1-215ENST00000589883 FAM81BQ96LP2 452 aa20.51■□□□□ 0.87
PTBP1-215ENST00000589883 HEXIM2Q96MH2 286 aaKnown RBP20.51■□□□□ 0.87
PTBP1-215ENST00000589883 ERGIC2Q96RQ1 377 aa20.51■□□□□ 0.87
PTBP1-215ENST00000589883 MED10Q9BTT4 135 aa20.51■□□□□ 0.87
PTBP1-215ENST00000589883 B3GNT5Q9BYG0 378 aa20.51■□□□□ 0.87
PTBP1-215ENST00000589883 GKN1Q9NS71 199 aa20.51■□□□□ 0.87
PTBP1-215ENST00000589883 TDP1Q9NUW8 608 aa20.51■□□□□ 0.87
PTBP1-215ENST00000589883 ZNF638Q14966 1978 aaKnown RBP20.51■□□□□ 0.87
PTBP1-215ENST00000589883 EPHB6O15197 1021 aa20.5■□□□□ 0.87
PTBP1-215ENST00000589883 UCHL3P15374 230 aa20.5■□□□□ 0.87
PTBP1-215ENST00000589883 TRIM21P19474 475 aaKnown RBP20.5■□□□□ 0.87
PTBP1-215ENST00000589883 TGM1P22735 817 aa20.5■□□□□ 0.87
PTBP1-215ENST00000589883 BDNFP23560 247 aa20.5■□□□□ 0.87
PTBP1-215ENST00000589883 CYP2F1P24903 491 aa20.5■□□□□ 0.87
PTBP1-215ENST00000589883 USP8P40818 1118 aa20.5■□□□□ 0.87
PTBP1-215ENST00000589883 TNK2Q07912 1038 aa20.5■□□□□ 0.87
PTBP1-215ENST00000589883 SPEM2Q0P670 501 aa20.5■□□□□ 0.87
PTBP1-215ENST00000589883 RUNX3Q13761 415 aa20.5■□□□□ 0.87
PTBP1-215ENST00000589883 RAPGEF1Q13905 1077 aa20.5■□□□□ 0.87
PTBP1-215ENST00000589883 NR1I3Q14994 352 aa20.5■□□□□ 0.87
PTBP1-215ENST00000589883 Q6ZS52 159 aa20.5■□□□□ 0.87
PTBP1-215ENST00000589883 CEP68Q76N32 757 aa20.5■□□□□ 0.87
PTBP1-215ENST00000589883 MAB21L3Q8N8X9 362 aa20.5■□□□□ 0.87
PTBP1-215ENST00000589883 RBBP8NLQ8NC74 664 aaPredicted RBP20.5■□□□□ 0.87
PTBP1-215ENST00000589883 ZNF518BQ9C0D4 1074 aa20.5■□□□□ 0.87
PTBP1-215ENST00000589883 DNAI2Q9GZS0 605 aa20.5■□□□□ 0.87
PTBP1-215ENST00000589883 GANQ9H2C0 597 aa20.5■□□□□ 0.87
PTBP1-215ENST00000589883 FAM124BQ9H5Z6 455 aaPredicted RBP20.5■□□□□ 0.87
PTBP1-215ENST00000589883 PLCB1Q9NQ66 1216 aa20.5■□□□□ 0.87
PTBP1-215ENST00000589883 K7ESF4 209 aa20.49■□□□□ 0.87
PTBP1-215ENST00000589883 RNF225M0QZC1 329 aaPredicted RBP20.49■□□□□ 0.87
PTBP1-215ENST00000589883 NOL4O94818 638 aa20.49■□□□□ 0.87
PTBP1-215ENST00000589883 CALCAP01258 141 aa20.49■□□□□ 0.87
PTBP1-215ENST00000589883 F11P03951 625 aa20.49■□□□□ 0.87
PTBP1-215ENST00000589883 PNMA6AP0CW24 399 aaPredicted RBP20.49■□□□□ 0.87
PTBP1-215ENST00000589883 CD19P15391 556 aa20.49■□□□□ 0.87
PTBP1-215ENST00000589883 HMGA1P17096 107 aaKnown RBP20.49■□□□□ 0.87
PTBP1-215ENST00000589883 GPR15P49685 360 aa20.49■□□□□ 0.87
PTBP1-215ENST00000589883 POLR2FP61218 127 aaKnown RBP20.49■□□□□ 0.87
PTBP1-215ENST00000589883 ZNF268Q14587 947 aaPredicted RBP20.49■□□□□ 0.87
PTBP1-215ENST00000589883 HEATR6Q6AI08 1181 aaKnown RBP20.49■□□□□ 0.87
PTBP1-215ENST00000589883 MON1AQ86VX9 555 aa20.49■□□□□ 0.87
PTBP1-215ENST00000589883 NEK11Q8NG66 645 aa20.49■□□□□ 0.87
PTBP1-215ENST00000589883 SLC2A14Q8TDB8 520 aa20.49■□□□□ 0.87
PTBP1-215ENST00000589883 NETO1Q8TDF5 533 aa20.49■□□□□ 0.87
PTBP1-215ENST00000589883 FAM83CQ9BQN1 747 aa20.49■□□□□ 0.87
PTBP1-215ENST00000589883 SMG9Q9H0W8 520 aaKnown RBP20.49■□□□□ 0.87
PTBP1-215ENST00000589883 PARD6AQ9NPB6 346 aa20.49■□□□□ 0.87
PTBP1-215ENST00000589883 MAGED2Q9UNF1 606 aaPredicted RBP20.49■□□□□ 0.87
PTBP1-215ENST00000589883 DENND4CQ5VZ89 1909 aa20.49■□□□□ 0.87
PTBP1-215ENST00000589883 HRO43593 1189 aa20.48■□□□□ 0.87
PTBP1-215ENST00000589883 ADORA2BP29275 332 aa20.48■□□□□ 0.87
PTBP1-215ENST00000589883 PDGFRLQ15198 375 aa20.48■□□□□ 0.87
PTBP1-215ENST00000589883 CFAP221Q4G0U5 840 aa20.48■□□□□ 0.87
PTBP1-215ENST00000589883 SDHAF4Q5VUM1 108 aa20.48■□□□□ 0.87
PTBP1-215ENST00000589883 FAM35AQ86V20 835 aa20.48■□□□□ 0.87
PTBP1-215ENST00000589883 WDR5BQ86VZ2 330 aa20.48■□□□□ 0.87
PTBP1-215ENST00000589883 SCN4BQ8IWT1 228 aa20.48■□□□□ 0.87
PTBP1-215ENST00000589883 FUKQ8N0W3 1084 aa20.48■□□□□ 0.87
PTBP1-215ENST00000589883 SHC3Q92529 594 aa20.48■□□□□ 0.87
PTBP1-215ENST00000589883 USP13Q92995 863 aaPredicted RBP20.48■□□□□ 0.87
PTBP1-215ENST00000589883 JAKMIP2Q96AA8 810 aa20.48■□□□□ 0.87
PTBP1-215ENST00000589883 CYFIP2Q96F07 1278 aa20.48■□□□□ 0.87
PTBP1-215ENST00000589883 FUBP3Q96I24 572 aaKnown RBP eCLIP20.48■□□□□ 0.87
PTBP1-215ENST00000589883 XPO4Q9C0E2 1151 aaKnown RBP20.48■□□□□ 0.87
PTBP1-215ENST00000589883 NLRC4Q9NPP4 1024 aa20.48■□□□□ 0.87
PTBP1-215ENST00000589883 RALGAPA1Q6GYQ0 2036 aa20.48■□□□□ 0.87
PTBP1-215ENST00000589883 CCDC163A0A0D9SF12 145 aa20.47■□□□□ 0.87
PTBP1-215ENST00000589883 DRAP1Q14919 205 aaPredicted RBP20.47■□□□□ 0.87
PTBP1-215ENST00000589883 CSRP2Q16527 193 aa20.47■□□□□ 0.87
PTBP1-215ENST00000589883 DDR2Q16832 855 aa20.47■□□□□ 0.87
PTBP1-215ENST00000589883 TMEM196Q5HYL7 178 aa20.47■□□□□ 0.87
PTBP1-215ENST00000589883 PAQR9Q6ZVX9 377 aa20.47■□□□□ 0.87
PTBP1-215ENST00000589883 TMEM150AQ86TG1 271 aa20.47■□□□□ 0.87
PTBP1-215ENST00000589883 STKLD1Q8NE28 680 aa20.47■□□□□ 0.87
PTBP1-215ENST00000589883 TRMT2BQ96GJ1 504 aaKnown RBP20.47■□□□□ 0.87
PTBP1-215ENST00000589883 NAA15Q9BXJ9 866 aaKnown RBP20.47■□□□□ 0.87
PTBP1-215ENST00000589883 KRT82Q9NSB4 513 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms