RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 LRRC8AQ8IWT6 810 aa14.3□□□□□ -0.12
VMP1-210ENST00000589823 MCOLN2Q8IZK6 566 aa14.3□□□□□ -0.12
VMP1-210ENST00000589823 CLEC4CQ8WTT0 213 aa14.3□□□□□ -0.12
VMP1-210ENST00000589823 FAM149B1Q96BN6 582 aa14.3□□□□□ -0.12
VMP1-210ENST00000589823 TCEAL4Q96EI5 215 aa14.3□□□□□ -0.12
VMP1-210ENST00000589823 VCPIP1Q96JH7 1222 aa14.3□□□□□ -0.12
VMP1-210ENST00000589823 TRIM62Q9BVG3 475 aa14.3□□□□□ -0.12
VMP1-210ENST00000589823 SPTLC3Q9NUV7 552 aa14.3□□□□□ -0.12
VMP1-210ENST00000589823 CDH22Q9UJ99 828 aa14.3□□□□□ -0.12
VMP1-210ENST00000589823 FAM50BQ9Y247 325 aa14.3□□□□□ -0.12
VMP1-210ENST00000589823 NCANO14594 1321 aa14.3□□□□□ -0.12
VMP1-210ENST00000589823 A0A1W2PQH9 124 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 ZNF840PA6NDX5 716 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 SOWAHDA6NJG2 315 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 YJEFN3A6XGL0 299 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 E7ENQ6 273 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 GOLGA8SH3BPF8 625 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 MBTPS2O43462 519 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 LTFP02788 710 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 MYBL1P10243 752 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 RALAP11233 206 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 GJA1P17302 382 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 DDX6P26196 483 aaKnown RBP eCLIP14.29□□□□□ -0.12
VMP1-210ENST00000589823 CCR2P41597 374 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 CYP4F8P98187 520 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 SLC6A3Q01959 620 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 PTP4A2Q12974 167 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 SPA17Q15506 151 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 SLC5A9Q2M3M2 681 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 PUS10Q3MIT2 529 aaKnown RBP14.29□□□□□ -0.12
VMP1-210ENST00000589823 C2CD6Q53TS8 623 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 PRSS36Q5K4E3 855 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 C10orf76Q5T2E6 689 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 FAM102AQ5T9C2 384 aaPredicted RBP14.29□□□□□ -0.12
VMP1-210ENST00000589823 BTBD8Q5XKL5 378 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 OLFML1Q6UWY5 402 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 GET4Q7L5D6 327 aaPredicted RBP14.29□□□□□ -0.12
VMP1-210ENST00000589823 TMEM150AQ86TG1 271 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 TMEM139Q8IV31 216 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 ITFG1Q8TB96 612 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 SHKBP1Q8TBC3 707 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 SUSD6Q92537 303 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 NDRG1Q92597 394 aaKnown RBP14.29□□□□□ -0.12
VMP1-210ENST00000589823 SLITRK6Q9H5Y7 841 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 LUC7LQ9NQ29 371 aaKnown RBP14.29□□□□□ -0.12
VMP1-210ENST00000589823 ASNSD1Q9NWL6 643 aa14.29□□□□□ -0.12
VMP1-210ENST00000589823 GRXCR2A6NFK2 248 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 EIF3CLB5ME19 914 aaKnown RBP14.28□□□□□ -0.12
VMP1-210ENST00000589823 CAPN9O14815 690 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 TADA3O75528 432 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 NDUFA10O95299 355 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 GLI1P08151 1106 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 H2AFZP0C0S5 128 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 ZDHHC11BP0C7U3 371 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 ABCB4P21439 1286 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 SCNN1AP37088 669 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 TEAD2Q15562 447 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 GREB1Q4ZG55 1949 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 HECTD3Q5T447 861 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 GPR158Q5T848 1215 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 SNX30Q5VWJ9 437 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 BSPRYQ5W0U4 402 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 DNAJC24Q6P3W2 148 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 H2AFVQ71UI9 128 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 RSRC2Q7L4I2 434 aaKnown RBP14.28□□□□□ -0.12
VMP1-210ENST00000589823 SLC26A9Q7LBE3 791 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 BHLHA9Q7RTU4 235 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 SCD5Q86SK9 330 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 PHLDB2Q86SQ0 1253 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 TADA2BQ86TJ2 420 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 DNAAF5Q86Y56 855 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 RNF139Q8WU17 664 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 ING5Q8WYH8 240 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 ZNF653Q96CK0 615 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 MCRS1Q96EZ8 462 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 CDK5RAP1Q96SZ6 601 aaKnown RBP14.28□□□□□ -0.12
VMP1-210ENST00000589823 EIF3CQ99613 913 aaKnown RBP14.28□□□□□ -0.12
VMP1-210ENST00000589823 SELENOOQ9BVL4 669 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 POMKQ9H5K3 350 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 TRPC7Q9HCX4 862 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 ABCC13Q9NSE7 274 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 CLIC5Q9NZA1 410 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 ZMYM5Q9UJ78 669 aa14.28□□□□□ -0.12
VMP1-210ENST00000589823 EPN1Q9Y6I3 576 aaPredicted RBP14.28□□□□□ -0.12
VMP1-210ENST00000589823 REV3LO60673 3130 aa14.27□□□□□ -0.12
VMP1-210ENST00000589823 ANKRD62A6NC57 917 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 SOBPA7XYQ1 873 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 TLR5O60602 858 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 HSF2BPO75031 334 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 MOSPD3O75425 235 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 RARGP13631 454 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 CEBPBP17676 345 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 PFKLP17858 780 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 TUBP50607 506 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 GSCP56915 257 aaPredicted RBP14.27□□□□□ -0.13
VMP1-210ENST00000589823 RNASE9P60153 205 aaKnown RBP14.27□□□□□ -0.13
VMP1-210ENST00000589823 YWHAZP63104 245 aaKnown RBP14.27□□□□□ -0.13
VMP1-210ENST00000589823 GPC5P78333 572 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 MTF1Q14872 753 aa14.27□□□□□ -0.13
VMP1-210ENST00000589823 AAK1Q2M2I8 961 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms