RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 NDUFV2P19404 249 aa19.05■□□□□ 0.64
CXXC1-211ENST00000589548 GNL1P36915 607 aaPredicted RBP19.05■□□□□ 0.64
CXXC1-211ENST00000589548 ALCAMQ13740 583 aa19.05■□□□□ 0.64
CXXC1-211ENST00000589548 EGFLAMQ63HQ2 1017 aa19.05■□□□□ 0.64
CXXC1-211ENST00000589548 SV2BQ7L1I2 683 aa19.05■□□□□ 0.64
CXXC1-211ENST00000589548 BRAPQ7Z569 592 aa19.05■□□□□ 0.64
CXXC1-211ENST00000589548 TMEM25Q86YD3 366 aa19.05■□□□□ 0.64
CXXC1-211ENST00000589548 TRIML1Q8N9V2 468 aa19.05■□□□□ 0.64
CXXC1-211ENST00000589548 KCNV2Q8TDN2 545 aa19.05■□□□□ 0.64
CXXC1-211ENST00000589548 OTUB2Q96DC9 234 aa19.05■□□□□ 0.64
CXXC1-211ENST00000589548 HSPA12BQ96MM6 686 aa19.05■□□□□ 0.64
CXXC1-211ENST00000589548 B3GNT5Q9BYG0 378 aa19.05■□□□□ 0.64
CXXC1-211ENST00000589548 CCDC39Q9UFE4 941 aa19.05■□□□□ 0.64
CXXC1-211ENST00000589548 CYP8B1Q9UNU6 501 aa19.05■□□□□ 0.64
CXXC1-211ENST00000589548 R3HCC1Q9Y3T6 440 aaKnown RBP19.05■□□□□ 0.64
CXXC1-211ENST00000589548 CLIC4Q9Y696 253 aa19.05■□□□□ 0.64
CXXC1-211ENST00000589548 TACC1O75410 805 aa19.04■□□□□ 0.64
CXXC1-211ENST00000589548 CST3P01034 146 aaPredicted RBP19.04■□□□□ 0.64
CXXC1-211ENST00000589548 PTPN1P18031 435 aaKnown RBP19.04■□□□□ 0.64
CXXC1-211ENST00000589548 YWHAQP27348 245 aa19.04■□□□□ 0.64
CXXC1-211ENST00000589548 NTSR1P30989 418 aa19.04■□□□□ 0.64
CXXC1-211ENST00000589548 DUOXA2Q1HG44 320 aa19.04■□□□□ 0.64
CXXC1-211ENST00000589548 SOWAHCQ53LP3 525 aaPredicted RBP19.04■□□□□ 0.64
CXXC1-211ENST00000589548 RRAGBQ5VZM2 374 aa19.04■□□□□ 0.64
CXXC1-211ENST00000589548 TRAPPC11Q7Z392 1133 aa19.04■□□□□ 0.64
CXXC1-211ENST00000589548 TRMT11Q7Z4G4 463 aaKnown RBP19.04■□□□□ 0.64
CXXC1-211ENST00000589548 RABEPKQ7Z6M1 372 aa19.04■□□□□ 0.64
CXXC1-211ENST00000589548 WDR49Q8IV35 697 aa19.04■□□□□ 0.64
CXXC1-211ENST00000589548 OR6B3Q8NGW1 331 aa19.04■□□□□ 0.64
CXXC1-211ENST00000589548 FBXO32Q969P5 355 aa19.04■□□□□ 0.64
CXXC1-211ENST00000589548 CLIC6Q96NY7 704 aa19.04■□□□□ 0.64
CXXC1-211ENST00000589548 ELOVL4Q9GZR5 314 aa19.04■□□□□ 0.64
CXXC1-211ENST00000589548 SLC6A17Q9H1V8 727 aa19.04■□□□□ 0.64
CXXC1-211ENST00000589548 SNX25Q9H3E2 840 aa19.04■□□□□ 0.64
CXXC1-211ENST00000589548 CCSER2Q9H7U1 834 aa19.04■□□□□ 0.64
CXXC1-211ENST00000589548 SPHK2Q9NRA0 654 aa19.04■□□□□ 0.64
CXXC1-211ENST00000589548 PPP4R2Q9NY27 417 aa19.04■□□□□ 0.64
CXXC1-211ENST00000589548 DEC1Q9P2X7 70 aa19.04■□□□□ 0.64
CXXC1-211ENST00000589548 ASXL3Q9C0F0 2248 aa19.04■□□□□ 0.64
CXXC1-211ENST00000589548 GOLGA4Q13439 2230 aaKnown RBP19.03■□□□□ 0.64
CXXC1-211ENST00000589548 A0A087X0B3 334 aa19.03■□□□□ 0.64
CXXC1-211ENST00000589548 A0A1W2PQD8 194 aa19.03■□□□□ 0.64
CXXC1-211ENST00000589548 ZNF233A6NK53 670 aa19.03■□□□□ 0.64
CXXC1-211ENST00000589548 FTH1P19P0C7X4 201 aa19.03■□□□□ 0.64
CXXC1-211ENST00000589548 RDXP35241 583 aaKnown RBP19.03■□□□□ 0.64
CXXC1-211ENST00000589548 HNRNPDQ14103 355 aaKnown RBP19.03■□□□□ 0.64
CXXC1-211ENST00000589548 RABEP1Q15276 862 aa19.03■□□□□ 0.64
CXXC1-211ENST00000589548 TRIP6Q15654 476 aaKnown RBP19.03■□□□□ 0.64
CXXC1-211ENST00000589548 BTBD8Q5XKL5 378 aa19.03■□□□□ 0.64
CXXC1-211ENST00000589548 LARP1BQ659C4 914 aaKnown RBP19.03■□□□□ 0.64
CXXC1-211ENST00000589548 NUP93Q8N1F7 819 aa19.03■□□□□ 0.64
CXXC1-211ENST00000589548 PNPLA1Q8N8W4 532 aa19.03■□□□□ 0.64
CXXC1-211ENST00000589548 SCAMP5Q8TAC9 235 aa19.03■□□□□ 0.64
CXXC1-211ENST00000589548 IPO4Q8TEX9 1081 aaKnown RBP19.03■□□□□ 0.64
CXXC1-211ENST00000589548 ADAMTS14Q8WXS8 1223 aa19.03■□□□□ 0.64
CXXC1-211ENST00000589548 KCNK16Q96T55 309 aa19.03■□□□□ 0.64
CXXC1-211ENST00000589548 TRIM9Q9C026 710 aa19.03■□□□□ 0.64
CXXC1-211ENST00000589548 PANK4Q9NVE7 773 aa19.03■□□□□ 0.64
CXXC1-211ENST00000589548 STARD13Q9Y3M8 1113 aa19.03■□□□□ 0.64
CXXC1-211ENST00000589548 KIAA0391O15091 583 aaKnown RBP19.02■□□□□ 0.64
CXXC1-211ENST00000589548 SYPP08247 313 aa19.02■□□□□ 0.64
CXXC1-211ENST00000589548 HOXD13P35453 343 aa19.02■□□□□ 0.64
CXXC1-211ENST00000589548 PGFP49763 221 aa19.02■□□□□ 0.64
CXXC1-211ENST00000589548 SURF1Q15526 300 aa19.02■□□□□ 0.64
CXXC1-211ENST00000589548 COL28A1Q2UY09 1125 aa19.02■□□□□ 0.64
CXXC1-211ENST00000589548 ANO4Q32M45 955 aa19.02■□□□□ 0.64
CXXC1-211ENST00000589548 HECTD3Q5T447 861 aa19.02■□□□□ 0.64
CXXC1-211ENST00000589548 SNX30Q5VWJ9 437 aa19.02■□□□□ 0.64
CXXC1-211ENST00000589548 PDZD3Q86UT5 571 aa19.02■□□□□ 0.64
CXXC1-211ENST00000589548 B3GALNT2Q8NCR0 500 aa19.02■□□□□ 0.64
CXXC1-211ENST00000589548 PDZD8Q8NEN9 1154 aa19.02■□□□□ 0.64
CXXC1-211ENST00000589548 OVCA2Q8WZ82 227 aa19.02■□□□□ 0.64
CXXC1-211ENST00000589548 HPS3Q969F9 1004 aa19.02■□□□□ 0.64
CXXC1-211ENST00000589548 DUSP9Q99956 384 aaKnown RBP19.02■□□□□ 0.64
CXXC1-211ENST00000589548 HSPBP1Q9NZL4 362 aa19.02■□□□□ 0.64
CXXC1-211ENST00000589548 CHORDC1Q9UHD1 332 aaPredicted RBP19.02■□□□□ 0.64
CXXC1-211ENST00000589548 SMC3Q9UQE7 1217 aa19.02■□□□□ 0.64
CXXC1-211ENST00000589548 SH3BP1Q9Y3L3 701 aa19.02■□□□□ 0.64
CXXC1-211ENST00000589548 RAD54BQ9Y620 910 aa19.02■□□□□ 0.64
CXXC1-211ENST00000589548 CABIN1Q9Y6J0 2220 aa19.02■□□□□ 0.64
CXXC1-211ENST00000589548 ASH1LQ9NR48 2969 aaKnown RBP19.01■□□□□ 0.63
CXXC1-211ENST00000589548 URB1O60287 2271 aaKnown RBP19.01■□□□□ 0.63
CXXC1-211ENST00000589548 RTN3O95197 1032 aaPredicted RBP19.01■□□□□ 0.63
CXXC1-211ENST00000589548 ZDHHC11BP0C7U3 371 aa19.01■□□□□ 0.63
CXXC1-211ENST00000589548 IRF1P10914 325 aa19.01■□□□□ 0.63
CXXC1-211ENST00000589548 SLC14A1Q13336 389 aa19.01■□□□□ 0.63
CXXC1-211ENST00000589548 PLEKHG6Q3KR16 790 aa19.01■□□□□ 0.63
CXXC1-211ENST00000589548 C8orf34Q49A92 452 aa19.01■□□□□ 0.63
CXXC1-211ENST00000589548 CCNI2Q6ZMN8 369 aaPredicted RBP19.01■□□□□ 0.63
CXXC1-211ENST00000589548 PAQR9Q6ZVX9 377 aa19.01■□□□□ 0.63
CXXC1-211ENST00000589548 NAXDQ8IW45 347 aa19.01■□□□□ 0.63
CXXC1-211ENST00000589548 ZNF419Q96HQ0 510 aaPredicted RBP19.01■□□□□ 0.63
CXXC1-211ENST00000589548 GABRG3Q99928 467 aa19.01■□□□□ 0.63
CXXC1-211ENST00000589548 IL37Q9NZH6 218 aa19.01■□□□□ 0.63
CXXC1-211ENST00000589548 GMIPQ9P107 970 aa19.01■□□□□ 0.63
CXXC1-211ENST00000589548 SRPRBQ9Y5M8 271 aaKnown RBP19.01■□□□□ 0.63
CXXC1-211ENST00000589548 CKAP5Q14008 2032 aa19.01■□□□□ 0.63
CXXC1-211ENST00000589548 TMEM131Q92545 1883 aa19.01■□□□□ 0.63
CXXC1-211ENST00000589548 PRRT4C9JH25 899 aa19■□□□□ 0.63
CXXC1-211ENST00000589548 GREM1O60565 184 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms