RNA–Protein interactions for RNA: ENST00000589309.5

PRKAR1A-218, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 3

Gene PRKAR1A, Length 407 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-218	ENST00000589309	C12orf29	Q8N999	325 aa		13.89	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	FBXL13	Q8NEE6	735 aa		13.89	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	TSTD1	Q8NFU3	115 aa		13.89	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	TAS1R2	Q8TE23	839 aa		13.89	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	USP33	Q8TEY7	942 aa		13.89	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	DDX1	Q92499	740 aa	Known RBP	13.89	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	CHAMP1	Q96JM3	812 aa		13.89	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	CDK5RAP1	Q96SZ6	601 aa	Known RBP	13.89	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	GOLPH3L	Q9H4A5	285 aa		13.89	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	CCSER2	Q9H7U1	834 aa		13.89	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	FAM49B	Q9NUQ9	324 aa		13.89	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	GMIP	Q9P107	970 aa		13.89	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	LSM7	Q9UK45	103 aa	Known RBP	13.89	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	SCML2	Q9UQR0	700 aa		13.89	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	ZNF638	Q14966	1978 aa	Known RBP	13.89	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	CACNA1A	O00555	2505 aa		13.89	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	TLR5	O60602	858 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	CILP	O75339	1184 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	KAT7	O95251	611 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	TRIM49	P0CI25	452 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	TRIM49C	P0CI26	452 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	CD58	P19256	250 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	ACO1	P21399	889 aa	Known RBP	13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	ORC1	Q13415	861 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	STIM1	Q13586	685 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	ZCWPW2	Q504Y3	356 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	COBLL1	Q53SF7	1204 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	EOGT	Q5NDL2	527 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	NAIF1	Q69YI7	327 aa	Predicted RBP	13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	KLHDC10	Q6PID8	442 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	HTR3D	Q70Z44	454 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	TRMT11	Q7Z4G4	463 aa	Known RBP	13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	C12orf50	Q8NA57	414 aa	Predicted RBP	13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	ZMIZ2	Q8NF64	920 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	ELMO3	Q96BJ8	720 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	HEXIM2	Q96MH2	286 aa	Known RBP	13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	TIGD1	Q96MW7	591 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	HHIP	Q96QV1	700 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	DUSP16	Q9BY84	665 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	UBXN6	Q9BZV1	441 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	ARRDC1-AS1	Q9H2J1	176 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	MMRN2	Q9H8L6	949 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	GDPD2	Q9HCC8	539 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	POLM	Q9NP87	494 aa	Predicted RBP	13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	ARHGEF4	Q9NR80	690 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	RAB20	Q9NX57	234 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	DEC1	Q9P2X7	70 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	MMP17	Q9ULZ9	603 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	CEP250	Q9BV73	2442 aa		13.88	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	TBC1D3B	A6NDS4	549 aa		13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	SLC30A4	O14863	429 aa		13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	SLC16A3	O15427	465 aa	Known RBP	13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	BEST1	O76090	585 aa		13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	EPN2	O95208	641 aa		13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	ZNF806	P0C7X5	589 aa		13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	RALA	P11233	206 aa		13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	PPP1R2	P41236	205 aa		13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	PLA2G4A	P47712	749 aa		13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	MXI1	P50539	228 aa		13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	SEC13	P55735	322 aa		13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	LRRC63	Q05C16	580 aa		13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	BYSL	Q13895	437 aa	Known RBP	13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	CRY1	Q16526	586 aa		13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	LY6G5C	Q5SRR4	150 aa		13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	CLEC20A	Q6ZU45	233 aa		13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	KBTBD6	Q86V97	674 aa		13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	ARHGAP18	Q8N392	663 aa		13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	ZNF276	Q8N554	614 aa		13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	EZH1	Q92800	747 aa	Predicted RBP	13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	SMARCE1	Q969G3	411 aa		13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	XPO6	Q96QU8	1125 aa	Known RBP	13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	APOBEC3G	Q9HC16	384 aa	Known RBP	13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	CYLD	Q9NQC7	956 aa		13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.87	□□□□□ -0.19	6e-10	■■■■■ 49.7
PRKAR1A-218	ENST00000589309	SPHK2	Q9NRA0	654 aa		13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	WDR35	Q9P2L0	1181 aa		13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	HMGXB4	Q9UGU5	601 aa		13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	ZNF510	Q9Y2H8	683 aa		13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.87	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	ZBTB24	O43167	697 aa	Predicted RBP	13.86	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	HOXC11	O43248	304 aa	Predicted RBP	13.86	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	PRCP	P42785	496 aa		13.86	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	SLC6A11	P48066	632 aa		13.86	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	YWHAE	P62258	255 aa	Known RBP	13.86	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	PNOC	Q13519	176 aa		13.86	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	GAB4	Q2WGN9	574 aa		13.86	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	ANO4	Q32M45	955 aa		13.86	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	PLK5	Q496M5	336 aa		13.86	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	AASDH	Q4L235	1098 aa	Predicted RBP	13.86	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	TCERG1L	Q5VWI1	586 aa		13.86	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.86	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	TMEM176A	Q96HP8	235 aa		13.86	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	ZFR	Q96KR1	1074 aa	Known RBP	13.86	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	CNOT6L	Q96LI5	555 aa	Known RBP	13.86	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	TWNK	Q96RR1	684 aa		13.86	□□□□□ -0.19
PRKAR1A-218	ENST00000589309	KLF16	Q9BXK1	252 aa	Predicted RBP	13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms