RNA–Protein interactions for RNA: ENST00000589167.1

NEDD4L-226, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-226ENST00000589167 C2orf49Q9BVC5 232 aaPredicted RBP7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 BACH2Q9BYV9 841 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 TNMDQ9H2S6 317 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 ZSCAN16Q9H4T2 348 aaPredicted RBP7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 EBF3Q9H4W6 596 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 TMEM206Q9H813 350 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 INTS13Q9NVM9 706 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 THG1LQ9NWX6 298 aaKnown RBP7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 HSPBP1Q9NZL4 362 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 GTF3C4Q9UKN8 822 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 EPG5Q9HCE0 2579 aa7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 TPRP12270 2363 aaKnown RBP7.45□□□□□ -1.22
NEDD4L-226ENST00000589167 OTOL1A6NHN0 477 aaPredicted RBP7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 ATP2C2O75185 946 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 NOL4O94818 638 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 CLSTN1O94985 981 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 YEATS4O95619 227 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 DLATP10515 647 aaKnown RBP7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 PXNP49023 591 aaPredicted RBP7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 NRLP54845 237 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 PCBP4P57723 403 aaKnown RBP7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 RPL10AP62906 217 aaKnown RBP7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 LMNB2Q03252 620 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 SPEM2Q0P670 501 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 PUM1Q14671 1186 aaKnown RBP eCLIP7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 MTF1Q14872 753 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 SNRNP35Q16560 246 aaKnown RBP7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 SOWAHAQ2M3V2 549 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 DGKKQ5KSL6 1271 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 LAIR1Q6GTX8 287 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 SHC4Q6S5L8 630 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 SPATA2LQ8IUW3 424 aaPredicted RBP7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 GRAMD1CQ8IYS0 662 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 TMEM86AQ8N2M4 240 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 TOP6BLQ8N6T0 577 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 HPDLQ96IR7 371 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 FAM83CQ9BQN1 747 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 ACBD6Q9BR61 282 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 PHACTR1Q9C0D0 580 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 BLZF1Q9H2G9 400 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 KIF9Q9HAQ2 790 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 ABCB6Q9NP58 842 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 AGPAT3Q9NRZ7 376 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 GKN1Q9NS71 199 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 TDP1Q9NUW8 608 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 KBTBD4Q9NVX7 518 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 POLR3BQ9NW08 1133 aaPredicted RBP7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 GDAP2Q9NXN4 497 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 DLL3Q9NYJ7 618 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 R3HCC1Q9Y3T6 440 aaKnown RBP7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 WNT6Q9Y6F9 365 aa7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.44□□□□□ -1.22
NEDD4L-226ENST00000589167 OBSL1O75147 1896 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 C2orf78A6NCI8 922 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 ZNF233A6NK53 670 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 GABRDO14764 452 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 GNB5O14775 395 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 SCAMP3O14828 347 aaKnown RBP7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 KIAA0391O15091 583 aaKnown RBP7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 CLIC2O15247 247 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 EIF3DO15371 548 aaKnown RBP eCLIP7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 CUTAO60888 179 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 PPP6R2O75170 966 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 PAPSS2O95340 614 aaPredicted RBP7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 EGFP01133 1207 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 PDGFRBP09619 1106 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 TGM1P22735 817 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 BDNFP23560 247 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 LMO2P25791 158 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 DDX6P26196 483 aaKnown RBP eCLIP7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 ADH6P28332 368 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 IFNAR2P48551 515 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 LHX1P48742 406 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 MLLT6P55198 1093 aaPredicted RBP7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 CYP27A1Q02318 531 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 FAM160A1Q05DH4 1040 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 MYO1EQ12965 1108 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 RUNX3Q13761 415 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 SIM2Q14190 667 aaPredicted RBP7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 KCNB1Q14721 858 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 ZNF77Q15935 545 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 DUOXA2Q1HG44 320 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 CFAP221Q4G0U5 840 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 MDH1BQ5I0G3 518 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 FSTL4Q6MZW2 842 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 CC2D1AQ6P1N0 951 aaPredicted RBP7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 SCARA5Q6ZMJ2 495 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 C4orf50Q6ZRC1 276 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 CEP68Q76N32 757 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 EPM2AIP1Q7L775 607 aaPredicted RBP7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 MON1AQ86VX9 555 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 LONP2Q86WA8 852 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 WDR49Q8IV35 697 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 ARL14EPQ8N8R7 260 aaPredicted RBP7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 IQUBQ8NA54 791 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 SPATA18Q8TC71 538 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 SH3RF2Q8TEC5 729 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 CCDC127Q96BQ5 260 aa7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 TRMT2BQ96GJ1 504 aaKnown RBP7.43□□□□□ -1.22
NEDD4L-226ENST00000589167 FUBP3Q96I24 572 aaKnown RBP eCLIP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms