RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 SLC46A2Q9BY10 475 aa19.94■□□□□ 0.78
CLPTM1-209ENST00000588855 TASP1Q9H6P5 420 aa19.94■□□□□ 0.78
CLPTM1-209ENST00000588855 TLR8Q9NR97 1041 aaKnown RBP19.94■□□□□ 0.78
CLPTM1-209ENST00000588855 OSER1Q9NX31 292 aa19.94■□□□□ 0.78
CLPTM1-209ENST00000588855 NR2E1Q9Y466 385 aa19.94■□□□□ 0.78
CLPTM1-209ENST00000588855 PAPSS1O43252 624 aaPredicted RBP19.93■□□□□ 0.78
CLPTM1-209ENST00000588855 ERBB2P04626 1255 aa19.93■□□□□ 0.78
CLPTM1-209ENST00000588855 LAMP2P13473 410 aa19.93■□□□□ 0.78
CLPTM1-209ENST00000588855 TNFAIP3P21580 790 aa19.93■□□□□ 0.78
CLPTM1-209ENST00000588855 SNX30Q5VWJ9 437 aa19.93■□□□□ 0.78
CLPTM1-209ENST00000588855 MON1AQ86VX9 555 aa19.93■□□□□ 0.78
CLPTM1-209ENST00000588855 SCUBE3Q8IX30 993 aa19.93■□□□□ 0.78
CLPTM1-209ENST00000588855 DRC7Q8IY82 874 aa19.93■□□□□ 0.78
CLPTM1-209ENST00000588855 ST13P5Q8NFI4 369 aaPredicted RBP19.93■□□□□ 0.78
CLPTM1-209ENST00000588855 SLC30A5Q8TAD4 765 aa19.93■□□□□ 0.78
CLPTM1-209ENST00000588855 IPO4Q8TEX9 1081 aaKnown RBP19.93■□□□□ 0.78
CLPTM1-209ENST00000588855 SLC22A12Q96S37 553 aa19.93■□□□□ 0.78
CLPTM1-209ENST00000588855 GDE1Q9NZC3 331 aa19.93■□□□□ 0.78
CLPTM1-209ENST00000588855 ARHGAP20Q9P2F6 1191 aa19.93■□□□□ 0.78
CLPTM1-209ENST00000588855 EPS15L1Q9UBC2 864 aa19.93■□□□□ 0.78
CLPTM1-209ENST00000588855 PRKAG3Q9UGI9 489 aa19.93■□□□□ 0.78
CLPTM1-209ENST00000588855 NAGPAQ9UK23 515 aa19.93■□□□□ 0.78
CLPTM1-209ENST00000588855 ZFP37Q9Y6Q3 630 aaPredicted RBP19.93■□□□□ 0.78
CLPTM1-209ENST00000588855 A0A0C4DFX4 3053 aa19.93■□□□□ 0.78
CLPTM1-209ENST00000588855 YJEFN3A6XGL0 299 aa19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 LOC730098B7Z3J9 87 aa19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 E7ENQ6 273 aa19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 DDX3XO00571 662 aaKnown RBP eCLIP19.92■□□□□ 0.782e-24■■■■□ 19.6
CLPTM1-209ENST00000588855 FBXO21O94952 628 aa19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 OAS1P00973 400 aaKnown RBP19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 DDX6P26196 483 aaKnown RBP eCLIP19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 YWHAGP61981 247 aaKnown RBP eCLIP19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 CENPCQ03188 943 aa19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 C2CD6Q53TS8 623 aa19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 ZSCAN18Q8TBC5 510 aaPredicted RBP19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 PIWIL1Q96J94 861 aaKnown RBP19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 SYNCQ9H7C4 482 aa19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 CCSER2Q9H7U1 834 aa19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 BZW2Q9Y6E2 419 aaKnown RBP19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 TJAP1Q5JTD0 557 aa19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 FAM78AQ5JUQ0 283 aa19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 HFE2Q6ZVN8 426 aa19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 FAM183BPQ6ZVS7 135 aa19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 ERICH1Q86X53 443 aa19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 ARL14EPQ8N8R7 260 aaPredicted RBP19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 SPC24Q8NBT2 197 aa19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 IRGQQ8WZA9 623 aa19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 ASB16Q96NS5 453 aa19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 CYP2S1Q96SQ9 504 aa19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 TAS2R14Q9NYV8 317 aa19.92■□□□□ 0.78
CLPTM1-209ENST00000588855 PRAMEF12O95522 483 aa19.91■□□□□ 0.78
CLPTM1-209ENST00000588855 NSFP46459 744 aaKnown RBP19.91■□□□□ 0.78
CLPTM1-209ENST00000588855 GABRB2P47870 512 aa19.91■□□□□ 0.78
CLPTM1-209ENST00000588855 PSEN1P49768 467 aa19.91■□□□□ 0.78
CLPTM1-209ENST00000588855 MMS22LQ6ZRQ5 1243 aa19.91■□□□□ 0.78
CLPTM1-209ENST00000588855 ZDHHC14Q8IZN3 488 aa19.91■□□□□ 0.78
CLPTM1-209ENST00000588855 CMTM8Q8IZV2 173 aa19.91■□□□□ 0.78
CLPTM1-209ENST00000588855 ARHGAP18Q8N392 663 aa19.91■□□□□ 0.78
CLPTM1-209ENST00000588855 C11orf70Q9BRQ4 267 aa19.91■□□□□ 0.78
CLPTM1-209ENST00000588855 SMG9Q9H0W8 520 aaKnown RBP19.91■□□□□ 0.78
CLPTM1-209ENST00000588855 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.91■□□□□ 0.781e-7■■■□□ 16
CLPTM1-209ENST00000588855 ZNHIT6Q9NWK9 470 aaKnown RBP19.91■□□□□ 0.78
CLPTM1-209ENST00000588855 ZMYM5Q9UJ78 669 aa19.91■□□□□ 0.78
CLPTM1-209ENST00000588855 NUDT5Q9UKK9 219 aa19.91■□□□□ 0.78
CLPTM1-209ENST00000588855 TRAV19A0A0A6YYK7 116 aa19.9■□□□□ 0.78
CLPTM1-209ENST00000588855 TLR5O60602 858 aa19.9■□□□□ 0.78
CLPTM1-209ENST00000588855 OLFM2O95897 454 aa19.9■□□□□ 0.78
CLPTM1-209ENST00000588855 CKMP06732 381 aa19.9■□□□□ 0.78
CLPTM1-209ENST00000588855 RARGP13631 454 aa19.9■□□□□ 0.78
CLPTM1-209ENST00000588855 MMP8P22894 467 aa19.9■□□□□ 0.78
CLPTM1-209ENST00000588855 FCARP24071 287 aa19.9■□□□□ 0.78
CLPTM1-209ENST00000588855 TUBP50607 506 aa19.9■□□□□ 0.78
CLPTM1-209ENST00000588855 TSR1Q2NL82 804 aaKnown RBP19.9■□□□□ 0.78
CLPTM1-209ENST00000588855 HECTD3Q5T447 861 aa19.9■□□□□ 0.78
CLPTM1-209ENST00000588855 OR6B2Q6IFH4 312 aa19.9■□□□□ 0.78
CLPTM1-209ENST00000588855 OLFML1Q6UWY5 402 aa19.9■□□□□ 0.78
CLPTM1-209ENST00000588855 XYLT1Q86Y38 959 aa19.9■□□□□ 0.78
CLPTM1-209ENST00000588855 ARID3BQ8IVW6 561 aaPredicted RBP19.9■□□□□ 0.78
CLPTM1-209ENST00000588855 PLCD3Q8N3E9 789 aa19.9■□□□□ 0.78
CLPTM1-209ENST00000588855 MSANTD4Q8NCY6 345 aa19.9■□□□□ 0.78
CLPTM1-209ENST00000588855 SMARCD2Q92925 531 aa19.9■□□□□ 0.78
CLPTM1-209ENST00000588855 FAM149B1Q96BN6 582 aa19.9■□□□□ 0.78
CLPTM1-209ENST00000588855 C18orf8Q96DM3 657 aa19.9■□□□□ 0.78
CLPTM1-209ENST00000588855 RNF38Q9H0F5 515 aa19.9■□□□□ 0.78
CLPTM1-209ENST00000588855 CLIC5Q9NZA1 410 aa19.9■□□□□ 0.78
CLPTM1-209ENST00000588855 ADAMTS1Q9UHI8 967 aa19.9■□□□□ 0.78
CLPTM1-209ENST00000588855 SOBPA7XYQ1 873 aa19.89■□□□□ 0.77
CLPTM1-209ENST00000588855 TMCO5BA8MYB1 307 aa19.89■□□□□ 0.77
CLPTM1-209ENST00000588855 SART1O43290 800 aaKnown RBP19.89■□□□□ 0.77
CLPTM1-209ENST00000588855 COCHO43405 550 aa19.89■□□□□ 0.77
CLPTM1-209ENST00000588855 TBX18O95935 607 aa19.89■□□□□ 0.77
CLPTM1-209ENST00000588855 LTFP02788 710 aa19.89■□□□□ 0.77
CLPTM1-209ENST00000588855 HDCP19113 662 aa19.89■□□□□ 0.77
CLPTM1-209ENST00000588855 AVPR1AP37288 418 aa19.89■□□□□ 0.77
CLPTM1-209ENST00000588855 EIF4A3P38919 411 aaKnown RBP19.89■□□□□ 0.77
CLPTM1-209ENST00000588855 SNX16P57768 344 aa19.89■□□□□ 0.77
CLPTM1-209ENST00000588855 PTP4A2Q12974 167 aa19.89■□□□□ 0.77
CLPTM1-209ENST00000588855 BSPRYQ5W0U4 402 aa19.89■□□□□ 0.77
CLPTM1-209ENST00000588855 BTBD8Q5XKL5 378 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms