RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 CHURC1-FNTBB4DL54 471 aa15.24■□□□□ 0.03
DDX39A-208ENST00000588692 P4HA2O15460 535 aa15.24■□□□□ 0.03
DDX39A-208ENST00000588692 ADH1CP00326 375 aa15.24■□□□□ 0.03
DDX39A-208ENST00000588692 CYP17A1P05093 508 aa15.24■□□□□ 0.03
DDX39A-208ENST00000588692 PSEN1P49768 467 aa15.24■□□□□ 0.03
DDX39A-208ENST00000588692 SLC8A3P57103 927 aa15.24■□□□□ 0.03
DDX39A-208ENST00000588692 CCDC186Q7Z3E2 898 aa15.24■□□□□ 0.03
DDX39A-208ENST00000588692 RUBCNQ92622 972 aa15.24■□□□□ 0.03
DDX39A-208ENST00000588692 JAKMIP2Q96AA8 810 aa15.24■□□□□ 0.03
DDX39A-208ENST00000588692 UBXN6Q9BZV1 441 aa15.24■□□□□ 0.03
DDX39A-208ENST00000588692 KIAA1468Q9P260 1216 aa15.24■□□□□ 0.03
DDX39A-208ENST00000588692 SH3BP1Q9Y3L3 701 aa15.24■□□□□ 0.03
DDX39A-208ENST00000588692 WDR87Q6ZQQ6 2873 aa15.24■□□□□ 0.03
DDX39A-208ENST00000588692 K7ESF4 209 aa15.23■□□□□ 0.03
DDX39A-208ENST00000588692 CYP26A1O43174 497 aa15.23■□□□□ 0.03
DDX39A-208ENST00000588692 RNF40O75150 1001 aa15.23■□□□□ 0.03
DDX39A-208ENST00000588692 FGFR1OPO95684 399 aaKnown RBP15.23■□□□□ 0.03
DDX39A-208ENST00000588692 EGFP01133 1207 aa15.23■□□□□ 0.03
DDX39A-208ENST00000588692 EIF2DP41214 584 aaKnown RBP15.23■□□□□ 0.03
DDX39A-208ENST00000588692 KIF11P52732 1056 aa15.23■□□□□ 0.03
DDX39A-208ENST00000588692 MARSP56192 900 aaKnown RBP15.23■□□□□ 0.03
DDX39A-208ENST00000588692 KLHDC10Q6PID8 442 aa15.23■□□□□ 0.03
DDX39A-208ENST00000588692 TADA2BQ86TJ2 420 aa15.23■□□□□ 0.03
DDX39A-208ENST00000588692 ADGRG2Q8IZP9 1017 aa15.23■□□□□ 0.03
DDX39A-208ENST00000588692 NT5C1BQ96P26 610 aa15.23■□□□□ 0.03
DDX39A-208ENST00000588692 FBRSL1Q9HCM7 1045 aaKnown RBP15.23■□□□□ 0.03
DDX39A-208ENST00000588692 SMG5Q9UPR3 1016 aaKnown RBP15.23■□□□□ 0.03
DDX39A-208ENST00000588692 USP3Q9Y6I4 520 aa15.23■□□□□ 0.03
DDX39A-208ENST00000588692 CNR2P34972 360 aa15.22■□□□□ 0.03
DDX39A-208ENST00000588692 ATP5C1P36542 298 aaKnown RBP15.22■□□□□ 0.03
DDX39A-208ENST00000588692 GOLGA8FQ08AF8 430 aa15.22■□□□□ 0.03
DDX39A-208ENST00000588692 GOLGA8DPQ0D2H9 430 aa15.22■□□□□ 0.03
DDX39A-208ENST00000588692 DHCR24Q15392 516 aa15.22■□□□□ 0.03
DDX39A-208ENST00000588692 SGO2Q562F6 1265 aa15.22■□□□□ 0.03
DDX39A-208ENST00000588692 LONP2Q86WA8 852 aa15.22■□□□□ 0.03
DDX39A-208ENST00000588692 TRIM59Q8IWR1 403 aa15.22■□□□□ 0.03
DDX39A-208ENST00000588692 ZNF276Q8N554 614 aa15.22■□□□□ 0.03
DDX39A-208ENST00000588692 UBR7Q8N806 425 aa15.22■□□□□ 0.03
DDX39A-208ENST00000588692 ANKRD52Q8NB46 1076 aa15.22■□□□□ 0.03
DDX39A-208ENST00000588692 ACDQ96AP0 544 aa15.22■□□□□ 0.03
DDX39A-208ENST00000588692 CDK5RAP1Q96SZ6 601 aaKnown RBP15.22■□□□□ 0.03
DDX39A-208ENST00000588692 KIAA1257Q9ULG3 409 aa15.22■□□□□ 0.03
DDX39A-208ENST00000588692 EP300Q09472 2414 aaPredicted RBP15.22■□□□□ 0.03
DDX39A-208ENST00000588692 FRYLO94915 3013 aa15.21■□□□□ 0.03
DDX39A-208ENST00000588692 CCDC192P0DO97 292 aa15.21■□□□□ 0.03
DDX39A-208ENST00000588692 OPRD1P41143 372 aa15.21■□□□□ 0.03
DDX39A-208ENST00000588692 PGFP49763 221 aa15.21■□□□□ 0.03
DDX39A-208ENST00000588692 BCAT1P54687 386 aa15.21■□□□□ 0.03
DDX39A-208ENST00000588692 STX17P56962 302 aa15.21■□□□□ 0.03
DDX39A-208ENST00000588692 GAB4Q2WGN9 574 aa15.21■□□□□ 0.03
DDX39A-208ENST00000588692 NAIF1Q69YI7 327 aaPredicted RBP15.21■□□□□ 0.03
DDX39A-208ENST00000588692 SECISBP2LQ93073 1101 aaKnown RBP15.21■□□□□ 0.03
DDX39A-208ENST00000588692 HINFPQ9BQA5 517 aa15.21■□□□□ 0.03
DDX39A-208ENST00000588692 NMUR1Q9HB89 426 aa15.21■□□□□ 0.03
DDX39A-208ENST00000588692 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.21■□□□□ 0.037e-9■□□□□ 9.8
DDX39A-208ENST00000588692 CLIC5Q9NZA1 410 aa15.21■□□□□ 0.03
DDX39A-208ENST00000588692 HESX1Q9UBX0 185 aa15.21■□□□□ 0.03
DDX39A-208ENST00000588692 RWDD2AQ9UIY3 292 aa15.21■□□□□ 0.03
DDX39A-208ENST00000588692 NAGPAQ9UK23 515 aa15.21■□□□□ 0.03
DDX39A-208ENST00000588692 LSM7Q9UK45 103 aaKnown RBP15.21■□□□□ 0.03
DDX39A-208ENST00000588692 SLC8A2Q9UPR5 921 aa15.21■□□□□ 0.03
DDX39A-208ENST00000588692 CCDC163A0A0D9SF12 145 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 A0A1W2PQH9 124 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.2■□□□□ 0.02
DDX39A-208ENST00000588692 RALAP11233 206 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 VDRP11473 427 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 ADH5P11766 374 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 RARGP13631 454 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 FNTBP49356 437 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 GCNT1Q02742 428 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 GAD2Q05329 585 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 LRMPQ12912 555 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 CAMK4Q16566 473 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 GOLGA7BQ2TAP0 167 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 RAB41Q5JT25 222 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 PKN3Q6P5Z2 889 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 RHBDF2Q6PJF5 856 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 PIGZQ86VD9 579 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 ARHGAP18Q8N392 663 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 EZH1Q92800 747 aaPredicted RBP15.2■□□□□ 0.02
DDX39A-208ENST00000588692 KLF16Q9BXK1 252 aaPredicted RBP15.2■□□□□ 0.02
DDX39A-208ENST00000588692 SRRTQ9BXP5 876 aaKnown RBP15.2■□□□□ 0.02
DDX39A-208ENST00000588692 C2orf42Q9NWW7 574 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 OSER1Q9NX31 292 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 NCDNQ9UBB6 729 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 DNMT3LQ9UJW3 386 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 TSPAN16Q9UKR8 245 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 RAB23Q9ULC3 237 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.2■□□□□ 0.02
DDX39A-208ENST00000588692 ATG2BQ96BY7 2078 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 SCAMP3O14828 347 aaKnown RBP15.2■□□□□ 0.02
DDX39A-208ENST00000588692 XPO1O14980 1071 aaKnown RBP15.2■□□□□ 0.02
DDX39A-208ENST00000588692 AFPP02771 609 aaKnown RBP15.2■□□□□ 0.02
DDX39A-208ENST00000588692 PAEPP09466 180 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 CD19P15391 556 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 BST2Q10589 180 aaKnown RBP15.2■□□□□ 0.02
DDX39A-208ENST00000588692 KCNH2Q12809 1159 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 PREPLQ4J6C6 727 aaPredicted RBP15.2■□□□□ 0.02
DDX39A-208ENST00000588692 LY6G5CQ5SRR4 150 aa15.2■□□□□ 0.02
DDX39A-208ENST00000588692 HTR3DQ70Z44 454 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms