RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 PCDHB12Q9Y5F1 795 aa27.24■■□□□ 1.95
SCAMP4-210ENST00000588555 C2CD2LO14523 706 aa27.23■■□□□ 1.95
SCAMP4-210ENST00000588555 TRIM66O15016 1216 aa27.23■■□□□ 1.95
SCAMP4-210ENST00000588555 DDR2Q16832 855 aa27.23■■□□□ 1.95
SCAMP4-210ENST00000588555 HADHQ16836 314 aaKnown RBP27.23■■□□□ 1.95
SCAMP4-210ENST00000588555 ABHD8Q96I13 439 aa27.23■■□□□ 1.95
SCAMP4-210ENST00000588555 PEBP4Q96S96 227 aa27.23■■□□□ 1.95
SCAMP4-210ENST00000588555 PLVAPQ9BX97 442 aa27.23■■□□□ 1.95
SCAMP4-210ENST00000588555 USP18Q9UMW8 372 aa27.23■■□□□ 1.95
SCAMP4-210ENST00000588555 TRUB2O95900 331 aaKnown RBP27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 OR1D2P34982 312 aa27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 GPR15P49685 360 aa27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 HDAC4P56524 1084 aa27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 OTUD1Q5VV17 481 aaPredicted RBP27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 BNIPLQ7Z465 357 aa27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 DPF3Q92784 378 aa27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 NGRNQ9NPE2 291 aaKnown RBP27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 LCHNA4D1U4 455 aa27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 FGF18O76093 207 aa27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 ZRANB2O95218 330 aaKnown RBP eCLIP27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 LTFP02788 710 aa27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 KRT7P08729 469 aa27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 NOS2P35228 1153 aa27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 TUBB4BP68371 445 aa27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 CLUL1Q15846 466 aa27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 LONRF2Q1L5Z9 754 aa27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 SLC25A52Q3SY17 297 aa27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 SDHAF4Q5VUM1 108 aa27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 SYPL2Q5VXT5 272 aa27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 VPS52Q8N1B4 723 aa27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 MMGT1Q8N4V1 131 aa27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 NAP1L3Q99457 506 aaPredicted RBP27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 KLHL11Q9NVR0 708 aa27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 DDX56Q9NY93 547 aaKnown RBP27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 CALCOCO1Q9P1Z2 691 aa27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 PCSK1NQ9UHG2 260 aa27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 SLC27A5Q9Y2P5 690 aa27.22■■□□□ 1.95
SCAMP4-210ENST00000588555 HAPLN1P10915 354 aaPredicted RBP27.21■■□□□ 1.95
SCAMP4-210ENST00000588555 DCAF6Q58WW2 860 aa27.21■■□□□ 1.95
SCAMP4-210ENST00000588555 ANKS1BQ7Z6G8 1248 aa27.21■■□□□ 1.95
SCAMP4-210ENST00000588555 SLC13A5Q86YT5 568 aaPredicted RBP27.21■■□□□ 1.95
SCAMP4-210ENST00000588555 ACSF2Q96CM8 615 aaPredicted RBP27.21■■□□□ 1.95
SCAMP4-210ENST00000588555 TBCBQ99426 244 aa27.21■■□□□ 1.95
SCAMP4-210ENST00000588555 NPY6RQ99463 290 aa27.21■■□□□ 1.95
SCAMP4-210ENST00000588555 HERPUD2Q9BSE4 406 aa27.21■■□□□ 1.95
SCAMP4-210ENST00000588555 AP1M1Q9BXS5 423 aa27.21■■□□□ 1.95
SCAMP4-210ENST00000588555 ZWILCHQ9H900 591 aa27.21■■□□□ 1.95
SCAMP4-210ENST00000588555 NR2E1Q9Y466 385 aa27.21■■□□□ 1.95
SCAMP4-210ENST00000588555 TLL1O43897 1013 aa27.2■■□□□ 1.95
SCAMP4-210ENST00000588555 PITX1P78337 314 aaPredicted RBP27.2■■□□□ 1.95
SCAMP4-210ENST00000588555 DUSP4Q13115 394 aa27.2■■□□□ 1.95
SCAMP4-210ENST00000588555 ELF2Q15723 593 aa27.2■■□□□ 1.95
SCAMP4-210ENST00000588555 SMTNL2Q2TAL5 461 aa27.2■■□□□ 1.95
SCAMP4-210ENST00000588555 KCNT1Q5JUK3 1230 aa27.2■■□□□ 1.95
SCAMP4-210ENST00000588555 STRADAQ7RTN6 431 aa27.2■■□□□ 1.95
SCAMP4-210ENST00000588555 RCOR2Q8IZ40 523 aa27.2■■□□□ 1.95
SCAMP4-210ENST00000588555 ZDHHC14Q8IZN3 488 aa27.2■■□□□ 1.95
SCAMP4-210ENST00000588555 RAPGEF5Q92565 580 aa27.2■■□□□ 1.95
SCAMP4-210ENST00000588555 NCAPGQ9BPX3 1015 aa27.2■■□□□ 1.95
SCAMP4-210ENST00000588555 MTIF3Q9H2K0 278 aaKnown RBP27.2■■□□□ 1.95
SCAMP4-210ENST00000588555 NAALADL1Q9UQQ1 740 aa27.2■■□□□ 1.95
SCAMP4-210ENST00000588555 PLXNA3P51805 1871 aa27.2■■□□□ 1.94
SCAMP4-210ENST00000588555 KRIT1O00522 736 aa27.2■■□□□ 1.94
SCAMP4-210ENST00000588555 SOAT2O75908 522 aa27.2■■□□□ 1.94
SCAMP4-210ENST00000588555 KRT1P04264 644 aa27.2■■□□□ 1.94
SCAMP4-210ENST00000588555 URODP06132 367 aa27.2■■□□□ 1.94
SCAMP4-210ENST00000588555 GPR65Q8IYL9 337 aa27.2■■□□□ 1.94
SCAMP4-210ENST00000588555 NUP93Q8N1F7 819 aa27.2■■□□□ 1.94
SCAMP4-210ENST00000588555 STKLD1Q8NE28 680 aa27.2■■□□□ 1.94
SCAMP4-210ENST00000588555 RBM41Q96IZ5 413 aaKnown RBP27.2■■□□□ 1.94
SCAMP4-210ENST00000588555 SLITRK1Q96PX8 696 aa27.2■■□□□ 1.94
SCAMP4-210ENST00000588555 IL37Q9NZH6 218 aa27.2■■□□□ 1.94
SCAMP4-210ENST00000588555 STK39Q9UEW8 545 aa27.2■■□□□ 1.94
SCAMP4-210ENST00000588555 TCRBV7S2A1N4TA0A589 114 aa27.19■■□□□ 1.94
SCAMP4-210ENST00000588555 C3orf70A6NLC5 250 aaPredicted RBP27.19■■□□□ 1.94
SCAMP4-210ENST00000588555 PI4K2BG5E9Z4 385 aa27.19■■□□□ 1.94
SCAMP4-210ENST00000588555 FSCN2O14926 492 aa27.19■■□□□ 1.94
SCAMP4-210ENST00000588555 ENDOD1O94919 500 aa27.19■■□□□ 1.94
SCAMP4-210ENST00000588555 ABLIM3O94929 683 aa27.19■■□□□ 1.94
SCAMP4-210ENST00000588555 RARAP10276 462 aa27.19■■□□□ 1.94
SCAMP4-210ENST00000588555 DESP17661 470 aa27.19■■□□□ 1.94
SCAMP4-210ENST00000588555 COL13A1Q5TAT6 717 aaPredicted RBP27.19■■□□□ 1.94
SCAMP4-210ENST00000588555 RNF25Q96BH1 459 aaPredicted RBP27.19■■□□□ 1.94
SCAMP4-210ENST00000588555 ZBP1Q9H171 429 aa27.19■■□□□ 1.94
SCAMP4-210ENST00000588555 PLXNA4Q9HCM2 1894 aa27.18■■□□□ 1.94
SCAMP4-210ENST00000588555 MYO16Q9Y6X6 1858 aa27.18■■□□□ 1.94
SCAMP4-210ENST00000588555 PRPSAP2O60256 369 aa27.18■■□□□ 1.94
SCAMP4-210ENST00000588555 LILRB3O75022 631 aa27.18■■□□□ 1.94
SCAMP4-210ENST00000588555 SULT1E1P49888 294 aa27.18■■□□□ 1.94
SCAMP4-210ENST00000588555 ATXN1P54253 815 aaKnown RBP27.18■■□□□ 1.94
SCAMP4-210ENST00000588555 KRT17Q04695 432 aa27.18■■□□□ 1.94
SCAMP4-210ENST00000588555 SIX1Q15475 284 aaPredicted RBP27.18■■□□□ 1.94
SCAMP4-210ENST00000588555 MGAT5BQ3V5L5 792 aa27.18■■□□□ 1.94
SCAMP4-210ENST00000588555 BSPRYQ5W0U4 402 aa27.18■■□□□ 1.94
SCAMP4-210ENST00000588555 MFSD7Q6UXD7 560 aa27.18■■□□□ 1.94
SCAMP4-210ENST00000588555 ADAT2Q7Z6V5 191 aaKnown RBP27.18■■□□□ 1.94
SCAMP4-210ENST00000588555 CCDC50Q8IVM0 306 aa27.18■■□□□ 1.94
SCAMP4-210ENST00000588555 KLHL23Q8NBE8 558 aa27.18■■□□□ 1.94
SCAMP4-210ENST00000588555 CMASQ8NFW8 434 aaPredicted RBP27.18■■□□□ 1.94
SCAMP4-210ENST00000588555 AUTS2Q8WXX7 1259 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms