RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 PNKPQ96T60 521 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 TPSD1Q9BZJ3 242 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 IMPG2Q9BZV3 1241 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 NACA2Q9H009 215 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 ZDHHC4Q9NPG8 344 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 COMMD8Q9NX08 183 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 TBC1D14Q9P2M4 693 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 EBF1Q9UH73 591 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 SH3BP1Q9Y3L3 701 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 ATP6V1DQ9Y5K8 247 aa15.17■□□□□ 0.02
VMP1-206ENST00000587945 HHLA1C9JL84 531 aa15.16■□□□□ 0.02
VMP1-206ENST00000587945 TLR5O60602 858 aa15.16■□□□□ 0.02
VMP1-206ENST00000587945 KAT7O95251 611 aa15.16■□□□□ 0.02
VMP1-206ENST00000587945 CHRM1P11229 460 aaPredicted RBP15.16■□□□□ 0.02
VMP1-206ENST00000587945 HNRNPLP14866 589 aaKnown RBP eCLIP15.16■□□□□ 0.027e-9■■■■■ 28.7
VMP1-206ENST00000587945 RPL13P26373 211 aaKnown RBP15.16■□□□□ 0.02
VMP1-206ENST00000587945 TIE1P35590 1138 aa15.16■□□□□ 0.02
VMP1-206ENST00000587945 TUBP50607 506 aa15.16■□□□□ 0.02
VMP1-206ENST00000587945 INCA1Q0VD86 236 aa15.16■□□□□ 0.02
VMP1-206ENST00000587945 PNOCQ13519 176 aa15.16■□□□□ 0.02
VMP1-206ENST00000587945 AASDHQ4L235 1098 aaPredicted RBP15.16■□□□□ 0.02
VMP1-206ENST00000587945 ANO7Q6IWH7 933 aa15.16■□□□□ 0.02
VMP1-206ENST00000587945 TMEM92Q6UXU6 159 aa15.16■□□□□ 0.02
VMP1-206ENST00000587945 CLEC20AQ6ZU45 233 aa15.16■□□□□ 0.02
VMP1-206ENST00000587945 ALLCQ8N6M5 410 aa15.16■□□□□ 0.02
VMP1-206ENST00000587945 CCDC26Q8TAB7 109 aa15.16■□□□□ 0.02
VMP1-206ENST00000587945 WHAMMQ8TF30 809 aa15.16■□□□□ 0.02
VMP1-206ENST00000587945 SEMA4DQ92854 862 aa15.16■□□□□ 0.02
VMP1-206ENST00000587945 CYFIP2Q96F07 1278 aa15.16■□□□□ 0.02
VMP1-206ENST00000587945 ZC3H10Q96K80 434 aaKnown RBP15.16■□□□□ 0.02
VMP1-206ENST00000587945 HNRNPABQ99729 332 aaKnown RBP15.16■□□□□ 0.02
VMP1-206ENST00000587945 NT5C1AQ9BXI3 368 aa15.16■□□□□ 0.02
VMP1-206ENST00000587945 NIF3L1Q9GZT8 377 aa15.16■□□□□ 0.02
VMP1-206ENST00000587945 DUSP15Q9H1R2 295 aaPredicted RBP15.16■□□□□ 0.02
VMP1-206ENST00000587945 CYP3A43Q9HB55 503 aa15.16■□□□□ 0.02
VMP1-206ENST00000587945 ARHGEF4Q9NR80 690 aa15.16■□□□□ 0.02
VMP1-206ENST00000587945 OSER1Q9NX31 292 aa15.16■□□□□ 0.02
VMP1-206ENST00000587945 MMP17Q9ULZ9 603 aa15.16■□□□□ 0.02
VMP1-206ENST00000587945 SDK1Q7Z5N4 2213 aa15.16■□□□□ 0.02
VMP1-206ENST00000587945 MDM4O15151 490 aa15.15■□□□□ 0.02
VMP1-206ENST00000587945 CYP26A1O43174 497 aa15.15■□□□□ 0.02
VMP1-206ENST00000587945 CILPO75339 1184 aa15.15■□□□□ 0.02
VMP1-206ENST00000587945 KLF8O95600 359 aaPredicted RBP15.15■□□□□ 0.02
VMP1-206ENST00000587945 APODP05090 189 aa15.15■□□□□ 0.02
VMP1-206ENST00000587945 ZNF806P0C7X5 589 aa15.15■□□□□ 0.02
VMP1-206ENST00000587945 ACO1P21399 889 aaKnown RBP15.15■□□□□ 0.02
VMP1-206ENST00000587945 GRIA2P42262 883 aa15.15■□□□□ 0.02
VMP1-206ENST00000587945 MRPS21P82921 87 aaKnown RBP15.15■□□□□ 0.02
VMP1-206ENST00000587945 CRY1Q16526 586 aa15.15■□□□□ 0.02
VMP1-206ENST00000587945 ZNF394Q53GI3 561 aa15.15■□□□□ 0.02
VMP1-206ENST00000587945 TCEAL6Q6IPX3 200 aa15.15■□□□□ 0.02
VMP1-206ENST00000587945 TMEM25Q86YD3 366 aa15.15■□□□□ 0.02
VMP1-206ENST00000587945 C12orf50Q8NA57 414 aaPredicted RBP15.15■□□□□ 0.02
VMP1-206ENST00000587945 IL17RCQ8NAC3 791 aa15.15■□□□□ 0.02
VMP1-206ENST00000587945 TXNDC5Q8NBS9 432 aaKnown RBP15.15■□□□□ 0.02
VMP1-206ENST00000587945 TCEAL3Q969E4 200 aa15.15■□□□□ 0.02
VMP1-206ENST00000587945 FBXO44Q9H4M3 255 aa15.15■□□□□ 0.02
VMP1-206ENST00000587945 NMUR1Q9HB89 426 aa15.15■□□□□ 0.02
VMP1-206ENST00000587945 TMEM8AQ9HCN3 771 aa15.15■□□□□ 0.02
VMP1-206ENST00000587945 TLR8Q9NR97 1041 aaKnown RBP15.15■□□□□ 0.02
VMP1-206ENST00000587945 NUDT5Q9UKK9 219 aa15.15■□□□□ 0.02
VMP1-206ENST00000587945 SCML2Q9UQR0 700 aa15.15■□□□□ 0.02
VMP1-206ENST00000587945 PTPRDP23468 1912 aa15.15■□□□□ 0.02
VMP1-206ENST00000587945 GREB1Q4ZG55 1949 aa15.15■□□□□ 0.02
VMP1-206ENST00000587945 ANAPC1Q9H1A4 1944 aa15.15■□□□□ 0.02
VMP1-206ENST00000587945 ATG2BQ96BY7 2078 aa15.15■□□□□ 0.02
VMP1-206ENST00000587945 ZNF638Q14966 1978 aaKnown RBP15.15■□□□□ 0.02
VMP1-206ENST00000587945 SPTBN2O15020 2390 aa15.14■□□□□ 0.01
VMP1-206ENST00000587945 A0A1W2PQH9 124 aa15.14■□□□□ 0.01
VMP1-206ENST00000587945 SGK1O00141 431 aa15.14■□□□□ 0.01
VMP1-206ENST00000587945 TRIM24O15164 1050 aa15.14■□□□□ 0.01
VMP1-206ENST00000587945 GREM1O60565 184 aa15.14■□□□□ 0.01
VMP1-206ENST00000587945 GBP1P32455 592 aa15.14■□□□□ 0.01
VMP1-206ENST00000587945 MPLP40238 635 aa15.14■□□□□ 0.01
VMP1-206ENST00000587945 EIF2DP41214 584 aaKnown RBP15.14■□□□□ 0.01
VMP1-206ENST00000587945 KIR2DL1P43626 348 aaPredicted RBP15.14■□□□□ 0.01
VMP1-206ENST00000587945 GAD2Q05329 585 aa15.14■□□□□ 0.01
VMP1-206ENST00000587945 ELF2Q15723 593 aa15.14■□□□□ 0.01
VMP1-206ENST00000587945 ANO4Q32M45 955 aa15.14■□□□□ 0.01
VMP1-206ENST00000587945 PLA2G2CQ5R387 149 aa15.14■□□□□ 0.01
VMP1-206ENST00000587945 PPP1R26Q5T8A7 1209 aaPredicted RBP15.14■□□□□ 0.01
VMP1-206ENST00000587945 ETFBKMTQ8IXQ9 262 aa15.14■□□□□ 0.01
VMP1-206ENST00000587945 PHTF2Q8N3S3 785 aa15.14■□□□□ 0.01
VMP1-206ENST00000587945 MDGA1Q8NFP4 955 aa15.14■□□□□ 0.01
VMP1-206ENST00000587945 OTUB2Q96DC9 234 aa15.14■□□□□ 0.01
VMP1-206ENST00000587945 KLF16Q9BXK1 252 aaPredicted RBP15.14■□□□□ 0.01
VMP1-206ENST00000587945 SPHK2Q9NRA0 654 aa15.14■□□□□ 0.01
VMP1-206ENST00000587945 A0A0A0MRY4 1105 aa15.13■□□□□ 0.01
VMP1-206ENST00000587945 TBC1D3BA6NDS4 549 aa15.13■□□□□ 0.01
VMP1-206ENST00000587945 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.13■□□□□ 0.01
VMP1-206ENST00000587945 HOXC11O43248 304 aaPredicted RBP15.13■□□□□ 0.01
VMP1-206ENST00000587945 FOXD2O60548 495 aaPredicted RBP15.13■□□□□ 0.01
VMP1-206ENST00000587945 ADAM23O75077 832 aa15.13■□□□□ 0.01
VMP1-206ENST00000587945 TULP3O75386 442 aa15.13■□□□□ 0.01
VMP1-206ENST00000587945 RHOBTB1O94844 696 aa15.13■□□□□ 0.01
VMP1-206ENST00000587945 TRIM21P19474 475 aaKnown RBP15.13■□□□□ 0.01
VMP1-206ENST00000587945 BCKDHBP21953 392 aa15.13■□□□□ 0.01
VMP1-206ENST00000587945 KCNA4P22459 653 aa15.13■□□□□ 0.01
VMP1-206ENST00000587945 GTF2H1P32780 548 aa15.13■□□□□ 0.01
VMP1-206ENST00000587945 PRCPP42785 496 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms