RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 PDCLQ13371 301 aa22.54■■□□□ 1.2
RETREG3-204ENST00000586796 MEA1Q16626 185 aa22.54■■□□□ 1.2
RETREG3-204ENST00000586796 PM20D1Q6GTS8 502 aa22.54■■□□□ 1.2
RETREG3-204ENST00000586796 GAS2L3Q86XJ1 694 aa22.54■■□□□ 1.2
RETREG3-204ENST00000586796 MFSD6LQ8IWD5 586 aa22.54■■□□□ 1.2
RETREG3-204ENST00000586796 UBALD2Q8IYN6 164 aa22.54■■□□□ 1.2
RETREG3-204ENST00000586796 BPIFB1Q8TDL5 484 aa22.54■■□□□ 1.2
RETREG3-204ENST00000586796 CLEC4CQ8WTT0 213 aa22.54■■□□□ 1.2
RETREG3-204ENST00000586796 DDX1Q92499 740 aaKnown RBP22.54■■□□□ 1.2
RETREG3-204ENST00000586796 LHX5Q9H2C1 402 aa22.54■■□□□ 1.2
RETREG3-204ENST00000586796 CNGB3Q9NQW8 809 aa22.54■■□□□ 1.2
RETREG3-204ENST00000586796 CPQQ9Y646 472 aa22.54■■□□□ 1.2
RETREG3-204ENST00000586796 RALAP11233 206 aa22.53■■□□□ 1.2
RETREG3-204ENST00000586796 PFKLP17858 780 aa22.53■■□□□ 1.2
RETREG3-204ENST00000586796 PBX1P40424 430 aa22.53■■□□□ 1.2
RETREG3-204ENST00000586796 SCUBE3Q8IX30 993 aa22.53■■□□□ 1.2
RETREG3-204ENST00000586796 ARHGAP18Q8N392 663 aa22.53■■□□□ 1.2
RETREG3-204ENST00000586796 SH3RF2Q8TEC5 729 aa22.53■■□□□ 1.2
RETREG3-204ENST00000586796 DEPDC1BQ8WUY9 529 aa22.53■■□□□ 1.2
RETREG3-204ENST00000586796 CPLX3Q8WVH0 158 aa22.53■■□□□ 1.2
RETREG3-204ENST00000586796 BAP1Q92560 729 aa22.53■■□□□ 1.2
RETREG3-204ENST00000586796 EDAQ92838 391 aa22.53■■□□□ 1.2
RETREG3-204ENST00000586796 BRD9Q9H8M2 597 aa22.53■■□□□ 1.2
RETREG3-204ENST00000586796 KIF9Q9HAQ2 790 aa22.53■■□□□ 1.2
RETREG3-204ENST00000586796 OBP2AQ9NY56 170 aa22.53■■□□□ 1.2
RETREG3-204ENST00000586796 MYO16Q9Y6X6 1858 aa22.53■■□□□ 1.2
RETREG3-204ENST00000586796 DENND4CQ5VZ89 1909 aa22.53■■□□□ 1.2
RETREG3-204ENST00000586796 LRRC53A6NM62 1247 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 YJEFN3A6XGL0 299 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 E5RJQ4 531 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 E7ENQ6 273 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 ZNF263O14978 683 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 MDM4O15151 490 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 OLFM2O95897 454 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 ACADSBP45954 432 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 PSEN1P49768 467 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 TUBP50607 506 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 DAOAP59103 153 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 SLC7A9P82251 487 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 ZNF268Q14587 947 aaPredicted RBP22.52■■□□□ 1.2
RETREG3-204ENST00000586796 C10orf120Q5SQS8 335 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 BTBD8Q5XKL5 378 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 TMEM35BQ8NCS4 154 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 RIN3Q8TB24 985 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 STK32AQ8WU08 396 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 ZFYVE19Q96K21 471 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 PPP1R13BQ96KQ4 1090 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 NOX5Q96PH1 765 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 NUP58Q9BVL2 599 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 SLC4A5Q9BY07 1137 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.52■■□□□ 1.2
RETREG3-204ENST00000586796 TJP2Q9UDY2 1190 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 NOCTQ9UK39 431 aaKnown RBP22.52■■□□□ 1.2
RETREG3-204ENST00000586796 FBXL21Q9UKT6 434 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 ARHGAP26Q9UNA1 814 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 MYO10Q9HD67 2058 aa22.52■■□□□ 1.2
RETREG3-204ENST00000586796 LEFTY2O00292 366 aa22.51■■□□□ 1.19
RETREG3-204ENST00000586796 IRF1P10914 325 aa22.51■■□□□ 1.19
RETREG3-204ENST00000586796 FERP16591 822 aa22.51■■□□□ 1.19
RETREG3-204ENST00000586796 ATP5C1P36542 298 aaKnown RBP22.51■■□□□ 1.19
RETREG3-204ENST00000586796 ZXDBP98169 803 aa22.51■■□□□ 1.19
RETREG3-204ENST00000586796 CDR2Q01850 454 aa22.51■■□□□ 1.19
RETREG3-204ENST00000586796 HFE2Q6ZVN8 426 aa22.51■■□□□ 1.19
RETREG3-204ENST00000586796 RSRC2Q7L4I2 434 aaKnown RBP22.51■■□□□ 1.19
RETREG3-204ENST00000586796 BHLHA9Q7RTU4 235 aa22.51■■□□□ 1.19
RETREG3-204ENST00000586796 ZNF677Q86XU0 584 aa22.51■■□□□ 1.19
RETREG3-204ENST00000586796 EDEM1Q92611 657 aa22.51■■□□□ 1.19
RETREG3-204ENST00000586796 CPXM1Q96SM3 734 aa22.51■■□□□ 1.19
RETREG3-204ENST00000586796 SYNCQ9H7C4 482 aa22.51■■□□□ 1.19
RETREG3-204ENST00000586796 CYLDQ9NQC7 956 aa22.51■■□□□ 1.19
RETREG3-204ENST00000586796 GKN1Q9NS71 199 aa22.51■■□□□ 1.19
RETREG3-204ENST00000586796 SEPT11Q9NVA2 429 aaKnown RBP22.51■■□□□ 1.19
RETREG3-204ENST00000586796 THG1LQ9NWX6 298 aaKnown RBP22.51■■□□□ 1.19
RETREG3-204ENST00000586796 CLIC5Q9NZA1 410 aa22.51■■□□□ 1.19
RETREG3-204ENST00000586796 ANAPC1Q9H1A4 1944 aa22.51■■□□□ 1.19
RETREG3-204ENST00000586796 NUP210Q8TEM1 1887 aaPredicted RBP22.5■■□□□ 1.19
RETREG3-204ENST00000586796 SCAMP3O14828 347 aaKnown RBP22.5■■□□□ 1.19
RETREG3-204ENST00000586796 FBXO21O94952 628 aa22.5■■□□□ 1.19
RETREG3-204ENST00000586796 CCDC172P0C7W6 258 aa22.5■■□□□ 1.19
RETREG3-204ENST00000586796 CHRNB2P17787 502 aa22.5■■□□□ 1.19
RETREG3-204ENST00000586796 RPL34P49207 117 aaKnown RBP22.5■■□□□ 1.19
RETREG3-204ENST00000586796 ASIC2Q16515 512 aa22.5■■□□□ 1.19
RETREG3-204ENST00000586796 BSPRYQ5W0U4 402 aa22.5■■□□□ 1.19
RETREG3-204ENST00000586796 CC2D1AQ6P1N0 951 aaPredicted RBP22.5■■□□□ 1.19
RETREG3-204ENST00000586796 TADA2BQ86TJ2 420 aa22.5■■□□□ 1.19
RETREG3-204ENST00000586796 TMEM110Q86TL2 294 aa22.5■■□□□ 1.19
RETREG3-204ENST00000586796 CPA5Q8WXQ8 436 aa22.5■■□□□ 1.19
RETREG3-204ENST00000586796 GOLGA1Q92805 767 aa22.5■■□□□ 1.19
RETREG3-204ENST00000586796 TTYH3Q9C0H2 523 aa22.5■■□□□ 1.19
RETREG3-204ENST00000586796 CFAP97Q9P2B7 532 aa22.5■■□□□ 1.19
RETREG3-204ENST00000586796 RASAL2Q9UJF2 1139 aa22.5■■□□□ 1.19
RETREG3-204ENST00000586796 CA14Q9ULX7 337 aa22.5■■□□□ 1.19
RETREG3-204ENST00000586796 PAPSS1O43252 624 aaPredicted RBP22.49■■□□□ 1.19
RETREG3-204ENST00000586796 FMO1Q01740 532 aa22.49■■□□□ 1.19
RETREG3-204ENST00000586796 SIGLEC14Q08ET2 396 aa22.49■■□□□ 1.19
RETREG3-204ENST00000586796 FCHO2Q0JRZ9 810 aa22.49■■□□□ 1.19
RETREG3-204ENST00000586796 EFEMP1Q12805 493 aa22.49■■□□□ 1.19
RETREG3-204ENST00000586796 MTF1Q14872 753 aa22.49■■□□□ 1.19
RETREG3-204ENST00000586796 ZNF77Q15935 545 aa22.49■■□□□ 1.19
RETREG3-204ENST00000586796 FIGNQ5HY92 759 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms