RNA–Protein interactions for RNA: ENST00000586704.5

TMEM259-205, Transcript of transmembrane protein 259, human

TSL 5

Gene TMEM259, Length 2,538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM259-205	ENST00000586704	CDH16	O75309	829 aa		18.75	■□□□□ 0.59
TMEM259-205	ENST00000586704	F2	P00734	622 aa		18.75	■□□□□ 0.59
TMEM259-205	ENST00000586704	CCNH	P51946	323 aa	Predicted RBP	18.75	■□□□□ 0.59
TMEM259-205	ENST00000586704	ATXN1	P54253	815 aa	Known RBP	18.75	■□□□□ 0.59
TMEM259-205	ENST00000586704	EFTUD2	Q15029	972 aa	Known RBP eCLIP	18.75	■□□□□ 0.59	8e-8	■■■□□ 17.2
TMEM259-205	ENST00000586704	ZBTB6	Q15916	424 aa		18.75	■□□□□ 0.59
TMEM259-205	ENST00000586704	CA9	Q16790	459 aa		18.75	■□□□□ 0.59
TMEM259-205	ENST00000586704	NAIF1	Q69YI7	327 aa	Predicted RBP	18.75	■□□□□ 0.59
TMEM259-205	ENST00000586704	NOTUM	Q6P988	496 aa		18.75	■□□□□ 0.59
TMEM259-205	ENST00000586704	KHSRP	Q92945	711 aa	Known RBP eCLIP	18.75	■□□□□ 0.59
TMEM259-205	ENST00000586704	SPDL1	Q96EA4	605 aa		18.75	■□□□□ 0.59
TMEM259-205	ENST00000586704	TRIM33	Q9UPN9	1127 aa		18.75	■□□□□ 0.59
TMEM259-205	ENST00000586704	GNE	Q9Y223	722 aa	Known RBP	18.75	■□□□□ 0.59
TMEM259-205	ENST00000586704	FARP1	Q9Y4F1	1045 aa	Predicted RBP	18.75	■□□□□ 0.59
TMEM259-205	ENST00000586704		A6NJR5	290 aa		18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	PAPSS1	O43252	624 aa	Predicted RBP	18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	SPAG7	O75391	227 aa		18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	TMEM63A	O94886	807 aa		18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	FGFR1	P11362	822 aa		18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	DARS	P14868	501 aa	Known RBP	18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	DPYSL3	Q14195	570 aa		18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	STAT4	Q14765	748 aa		18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	OLFML1	Q6UWY5	402 aa		18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	CCDC33	Q8N5R6	958 aa		18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	WDR83	Q9BRX9	315 aa	Known RBP	18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	EURL	Q9NYK6	297 aa		18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	RRN3P2	A6NIE6	340 aa		18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704		A8MXQ7	604 aa		18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	RASA4B	C9J798	803 aa		18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	RASA4	O43374	803 aa		18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	PRPSAP2	O60256	369 aa		18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	TCEA3	O75764	348 aa		18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	SMNDC1	O75940	238 aa	Known RBP eCLIP	18.74	■□□□□ 0.59	5e-6	■■■■■ 27.5
TMEM259-205	ENST00000586704	STAU1	O95793	577 aa	Known RBP	18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	IGFBP6	P24592	240 aa	Predicted RBP	18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	SSTR1	P30872	391 aa		18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	IRX1	P78414	480 aa	Predicted RBP	18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	BASP1	P80723	227 aa	Known RBP	18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	MFSD10	Q14728	455 aa		18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	C9orf57	Q5W0N0	161 aa		18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	C2orf69	Q8N8R5	385 aa		18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	FAM172A	Q8WUF8	416 aa		18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	RMDN2	Q96LZ7	410 aa		18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	CACNG4	Q9UBN1	327 aa		18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	NRCAM	Q92823	1304 aa		18.74	■□□□□ 0.59
TMEM259-205	ENST00000586704	APOC4-APOC2	K7ER74	178 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	APOC2	P02655	101 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	MYL3	P08590	195 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	CYP2B6	P20813	491 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	CCNG1	P51959	295 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	GPX6	P59796	221 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	SOX4	Q06945	474 aa	Predicted RBP	18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	HIF1A	Q16665	826 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	PKDCC	Q504Y2	493 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	CGB2	Q6NT52	195 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	NT5DC4	Q86YG4	428 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	CCDC77	Q9BR77	488 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	MAK16	Q9BXY0	300 aa	Known RBP	18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	LGALS13	Q9UHV8	139 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	SHOC2	Q9UQ13	582 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	EFR3B	Q9Y2G0	817 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	CCNB1	P14635	433 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	ATP5D	P30049	168 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	CDC25C	P30307	473 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	MGAT5	Q09328	741 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	PKN2	Q16513	984 aa	Known RBP	18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	DARS2	Q6PI48	645 aa	Known RBP	18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	CENPU	Q71F23	418 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	BEST2	Q8NFU1	509 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	SLC35F5	Q8WV83	523 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	MAML1	Q92585	1016 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	HEY1	Q9Y5J3	304 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	CLUH	O75153	1309 aa		18.73	■□□□□ 0.59
TMEM259-205	ENST00000586704	SLC15A5	A6NIM6	579 aa		18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	MCF2L	O15068	1137 aa		18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	ALOX15B	O15296	676 aa		18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	PCK1	P35558	622 aa		18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	KRT81	Q14533	505 aa		18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	SNX17	Q15036	470 aa		18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	ANKRD20A2	Q5SQ80	823 aa		18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	ANKRD20A1	Q5TYW2	823 aa		18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	ANKRD20A3	Q5VUR7	823 aa		18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	NAT8L	Q8N9F0	302 aa		18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	ANKLE1	Q8NAG6	615 aa		18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	TTC13	Q8NBP0	860 aa		18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	RSAD1	Q9HA92	442 aa		18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	PLEKHA5	Q9HAU0	1116 aa		18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	SMIM28	A0A1B0GU29	152 aa		18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	ZNF865	P0CJ78	1059 aa	Predicted RBP	18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	LCP1	P13796	627 aa		18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	ATP2A2	P16615	1042 aa	Known RBP	18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	IL4R	P24394	825 aa		18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	SKIV2L2	P42285	1042 aa	Known RBP	18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	PPP6R3	Q5H9R7	873 aa	Predicted RBP	18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	RNF43	Q68DV7	783 aa		18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	ALKAL1	Q6UXT8	129 aa		18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	PPIL6	Q8IXY8	311 aa		18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	C4orf33	Q8N1A6	199 aa		18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	KBTBD7	Q8WVZ9	684 aa		18.72	■□□□□ 0.59
TMEM259-205	ENST00000586704	NDRG1	Q92597	394 aa	Known RBP	18.72	■□□□□ 0.59

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