RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 FOXQ1Q9C009 403 aa16.98■□□□□ 0.31
ATG4D-205ENST00000586477 LHX5Q9H2C1 402 aa16.98■□□□□ 0.31
ATG4D-205ENST00000586477 HAUS4Q9H6D7 363 aa16.98■□□□□ 0.31
ATG4D-205ENST00000586477 PNPLA8Q9NP80 782 aa16.98■□□□□ 0.31
ATG4D-205ENST00000586477 DMAP1Q9NPF5 467 aaPredicted RBP16.98■□□□□ 0.31
ATG4D-205ENST00000586477 KRT82Q9NSB4 513 aa16.98■□□□□ 0.31
ATG4D-205ENST00000586477 NOCTQ9UK39 431 aaKnown RBP16.98■□□□□ 0.31
ATG4D-205ENST00000586477 CACNA1IQ9P0X4 2223 aa16.98■□□□□ 0.31
ATG4D-205ENST00000586477 M0QYV0 167 aa16.97■□□□□ 0.31
ATG4D-205ENST00000586477 STK25O00506 426 aa16.97■□□□□ 0.31
ATG4D-205ENST00000586477 CCDC130P13994 396 aa16.97■□□□□ 0.31
ATG4D-205ENST00000586477 TNFAIP3P21580 790 aa16.97■□□□□ 0.31
ATG4D-205ENST00000586477 CYP2F1P24903 491 aa16.97■□□□□ 0.31
ATG4D-205ENST00000586477 ADORA2BP29275 332 aa16.97■□□□□ 0.31
ATG4D-205ENST00000586477 VEPH1Q14D04 833 aa16.97■□□□□ 0.31
ATG4D-205ENST00000586477 GOLGA7BQ2TAP0 167 aa16.97■□□□□ 0.31
ATG4D-205ENST00000586477 SLC44A4Q53GD3 710 aa16.97■□□□□ 0.31
ATG4D-205ENST00000586477 SDHAF4Q5VUM1 108 aa16.97■□□□□ 0.31
ATG4D-205ENST00000586477 NOP9Q86U38 636 aaKnown RBP16.97■□□□□ 0.31
ATG4D-205ENST00000586477 GPIHBP1Q8IV16 184 aa16.97■□□□□ 0.31
ATG4D-205ENST00000586477 CCDC105Q8IYK2 499 aa16.97■□□□□ 0.31
ATG4D-205ENST00000586477 LRRC3BQ96PB8 259 aa16.97■□□□□ 0.31
ATG4D-205ENST00000586477 DUSP16Q9BY84 665 aa16.97■□□□□ 0.31
ATG4D-205ENST00000586477 UBXN6Q9BZV1 441 aa16.97■□□□□ 0.31
ATG4D-205ENST00000586477 ZFP14Q9HCL3 533 aa16.97■□□□□ 0.31
ATG4D-205ENST00000586477 CYLDQ9NQC7 956 aa16.97■□□□□ 0.31
ATG4D-205ENST00000586477 AP1G2O75843 785 aa16.96■□□□□ 0.31
ATG4D-205ENST00000586477 IPO7O95373 1038 aaKnown RBP16.96■□□□□ 0.31
ATG4D-205ENST00000586477 GABRR2P28476 465 aa16.96■□□□□ 0.31
ATG4D-205ENST00000586477 GRIK1P39086 918 aa16.96■□□□□ 0.31
ATG4D-205ENST00000586477 CYP4F8P98187 520 aa16.96■□□□□ 0.31
ATG4D-205ENST00000586477 MLF2Q15773 248 aaPredicted RBP16.96■□□□□ 0.31
ATG4D-205ENST00000586477 DDR2Q16832 855 aa16.96■□□□□ 0.31
ATG4D-205ENST00000586477 CCDC186Q7Z3E2 898 aa16.96■□□□□ 0.31
ATG4D-205ENST00000586477 CCDC170Q8IYT3 715 aa16.96■□□□□ 0.31
ATG4D-205ENST00000586477 STK32AQ8WU08 396 aa16.96■□□□□ 0.31
ATG4D-205ENST00000586477 TFAP2BQ92481 460 aa16.96■□□□□ 0.31
ATG4D-205ENST00000586477 DDX1Q92499 740 aaKnown RBP16.96■□□□□ 0.31
ATG4D-205ENST00000586477 C8orf48Q96LL4 319 aa16.96■□□□□ 0.31
ATG4D-205ENST00000586477 CCDC42Q96M95 316 aa16.96■□□□□ 0.31
ATG4D-205ENST00000586477 BAG1Q99933 345 aaPredicted RBP16.96■□□□□ 0.31
ATG4D-205ENST00000586477 CSNK1G1Q9HCP0 422 aa16.96■□□□□ 0.31
ATG4D-205ENST00000586477 LUC7LQ9NQ29 371 aaKnown RBP16.96■□□□□ 0.31
ATG4D-205ENST00000586477 SEPT11Q9NVA2 429 aaKnown RBP16.96■□□□□ 0.31
ATG4D-205ENST00000586477 MTF2Q9Y483 593 aaPredicted RBP16.96■□□□□ 0.31
ATG4D-205ENST00000586477 ZNF638Q14966 1978 aaKnown RBP16.96■□□□□ 0.31
ATG4D-205ENST00000586477 PATJQ8NI35 1801 aa16.96■□□□□ 0.3
ATG4D-205ENST00000586477 ZFHX2Q9C0A1 2572 aaPredicted RBP16.95■□□□□ 0.3
ATG4D-205ENST00000586477 ARNTLO00327 626 aa16.95■□□□□ 0.3
ATG4D-205ENST00000586477 XPO1O14980 1071 aaKnown RBP16.95■□□□□ 0.3
ATG4D-205ENST00000586477 AKR1B10O60218 316 aa16.95■□□□□ 0.3
ATG4D-205ENST00000586477 TADA3O75528 432 aa16.95■□□□□ 0.3
ATG4D-205ENST00000586477 PRAMEF12O95522 483 aa16.95■□□□□ 0.3
ATG4D-205ENST00000586477 F11P03951 625 aa16.95■□□□□ 0.3
ATG4D-205ENST00000586477 DCNP07585 359 aaKnown RBP16.95■□□□□ 0.3
ATG4D-205ENST00000586477 BDNFP23560 247 aa16.95■□□□□ 0.3
ATG4D-205ENST00000586477 CYLC1P35663 651 aaPredicted RBP16.95■□□□□ 0.3
ATG4D-205ENST00000586477 MAPK8IP2Q13387 824 aaPredicted RBP16.95■□□□□ 0.3
ATG4D-205ENST00000586477 TAF3Q5VWG9 929 aa16.95■□□□□ 0.3
ATG4D-205ENST00000586477 HGSNATQ68CP4 663 aa16.95■□□□□ 0.3
ATG4D-205ENST00000586477 ITIH5Q86UX2 942 aa16.95■□□□□ 0.3
ATG4D-205ENST00000586477 DTWD2Q8NBA8 298 aa16.95■□□□□ 0.3
ATG4D-205ENST00000586477 IPO4Q8TEX9 1081 aaKnown RBP16.95■□□□□ 0.3
ATG4D-205ENST00000586477 SPATA17Q96L03 361 aa16.95■□□□□ 0.3
ATG4D-205ENST00000586477 ATXN3LQ9H3M9 355 aa16.95■□□□□ 0.3
ATG4D-205ENST00000586477 COMMD8Q9NX08 183 aa16.95■□□□□ 0.3
ATG4D-205ENST00000586477 HEPACAM2A8MVW5 462 aa16.94■□□□□ 0.3
ATG4D-205ENST00000586477 GFRA3O60609 400 aa16.94■□□□□ 0.3
ATG4D-205ENST00000586477 MMEP08473 750 aa16.94■□□□□ 0.3
ATG4D-205ENST00000586477 GZMAP12544 262 aa16.94■□□□□ 0.3
ATG4D-205ENST00000586477 CD72P21854 359 aa16.94■□□□□ 0.3
ATG4D-205ENST00000586477 FECHP22830 423 aa16.94■□□□□ 0.3
ATG4D-205ENST00000586477 CDH5P33151 784 aaPredicted RBP16.94■□□□□ 0.3
ATG4D-205ENST00000586477 ACADSBP45954 432 aa16.94■□□□□ 0.3
ATG4D-205ENST00000586477 NSFP46459 744 aaKnown RBP16.94■□□□□ 0.3
ATG4D-205ENST00000586477 PLA2G4AP47712 749 aa16.94■□□□□ 0.3
ATG4D-205ENST00000586477 GPR158Q5T848 1215 aa16.94■□□□□ 0.3
ATG4D-205ENST00000586477 E4F1Q66K89 784 aaPredicted RBP16.94■□□□□ 0.3
ATG4D-205ENST00000586477 WDR59Q6PJI9 974 aa16.94■□□□□ 0.3
ATG4D-205ENST00000586477 CLEC20AQ6ZU45 233 aa16.94■□□□□ 0.3
ATG4D-205ENST00000586477 ARID3BQ8IVW6 561 aaPredicted RBP16.94■□□□□ 0.3
ATG4D-205ENST00000586477 MFSD6LQ8IWD5 586 aa16.94■□□□□ 0.3
ATG4D-205ENST00000586477 ZNF687Q8N1G0 1237 aa16.94■□□□□ 0.3
ATG4D-205ENST00000586477 PJA1Q8NG27 643 aa16.94■□□□□ 0.3
ATG4D-205ENST00000586477 HSFY1Q96LI6 401 aa16.94■□□□□ 0.3
ATG4D-205ENST00000586477 PPP1R9BQ96SB3 815 aa16.94■□□□□ 0.3
ATG4D-205ENST00000586477 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.94■□□□□ 0.3
ATG4D-205ENST00000586477 SLITRK6Q9H5Y7 841 aa16.94■□□□□ 0.3
ATG4D-205ENST00000586477 ACP6Q9NPH0 428 aa16.94■□□□□ 0.3
ATG4D-205ENST00000586477 HEBP1Q9NRV9 189 aa16.94■□□□□ 0.3
ATG4D-205ENST00000586477 TMEM30AQ9NV96 361 aa16.94■□□□□ 0.3
ATG4D-205ENST00000586477 ARHGAP20Q9P2F6 1191 aa16.94■□□□□ 0.3
ATG4D-205ENST00000586477 RIF1Q5UIP0 2472 aaKnown RBP16.94■□□□□ 0.3
ATG4D-205ENST00000586477 KANSL1LA0AUZ9 987 aa16.93■□□□□ 0.3
ATG4D-205ENST00000586477 CLDN5O00501 218 aa16.93■□□□□ 0.3
ATG4D-205ENST00000586477 RTN3O95197 1032 aaPredicted RBP16.93■□□□□ 0.3
ATG4D-205ENST00000586477 SKILP12757 684 aa16.93■□□□□ 0.3
ATG4D-205ENST00000586477 PSMC3P17980 439 aa16.93■□□□□ 0.3
ATG4D-205ENST00000586477 GDI1P31150 447 aa16.93■□□□□ 0.3
ATG4D-205ENST00000586477 MAP3K7CLP57077 242 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms