RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 SPARCL1Q14515 664 aa12.96□□□□□ -0.34
SMARCA4-208ENST00000585799 EFHC1Q5JVL4 640 aa12.96□□□□□ -0.34
SMARCA4-208ENST00000585799 FAM117BQ6P1L5 589 aa12.96□□□□□ -0.34
SMARCA4-208ENST00000585799 CDKL3Q8IVW4 592 aaPredicted RBP12.96□□□□□ -0.34
SMARCA4-208ENST00000585799 TMEM40Q8WWA1 233 aa12.96□□□□□ -0.34
SMARCA4-208ENST00000585799 PCDHGC3Q9UN70 934 aa12.96□□□□□ -0.34
SMARCA4-208ENST00000585799 SMIM35A0A1B0GVV1 85 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 H3BRJ5 948 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 ELK3P41970 407 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 COPS2P61201 443 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 MXRA7P84157 204 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 PKN2Q16513 984 aaKnown RBP12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 ARL13BQ3SXY8 428 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 ZNF449Q6P9G9 518 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 TTC30AQ86WT1 665 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 THEM5Q8N1Q8 247 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 EIF1ADQ8N9N8 165 aaKnown RBP12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 PTPRHQ9HD43 1115 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 PHIPQ8WWQ0 1821 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 DFFAO00273 331 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 EEF2KO00418 725 aaKnown RBP12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 PTPN1P18031 435 aaKnown RBP12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 NDUFV1P49821 464 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 SKOR1P84550 965 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 POU5F1Q01860 360 aaKnown RBP12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 TBC1D1Q86TI0 1168 aaPredicted RBP12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 ALLCQ8N6M5 410 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 B3GALNT2Q8NCR0 500 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 PGLYRP2Q96PD5 576 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 APBA2Q99767 749 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 ROPN1BQ9BZX4 212 aaPredicted RBP12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 MAF1Q9H063 256 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 LHX5Q9H2C1 402 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 ROPN1Q9HAT0 212 aaPredicted RBP12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 FLRT1Q9NZU1 646 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 MEIS3P2A8K0S8 358 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 KRT4P19013 534 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 BDNFP23560 247 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 CLDN10P78369 228 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 GAD2Q05329 585 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 CA9Q16790 459 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 ANKRD22Q5VYY1 191 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 TAF2Q6P1X5 1199 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 LCLAT1Q6UWP7 414 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 ANKS1BQ7Z6G8 1248 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 GLT1D1Q96MS3 346 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 TSNARE1Q96NA8 513 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 SERPINB12Q96P63 405 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 TBCBQ99426 244 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 ARHGAP39Q9C0H5 1083 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 SMYD2Q9NRG4 433 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 SLC38A7Q9NVC3 462 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 UBP1Q9NZI7 540 aa12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 FNDC3AQ9Y2H6 1198 aaKnown RBP12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 GREB1LQ9C091 1923 aaPredicted RBP12.95□□□□□ -0.34
SMARCA4-208ENST00000585799 PAPSS1O43252 624 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 SLC4A1P02730 911 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 EPHB2P29323 1055 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 SOWAHAQ2M3V2 549 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 BTBD8Q5XKL5 378 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 FBXW10Q5XX13 1052 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 HIBCHQ6NVY1 386 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 KCNT2Q6UVM3 1135 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 BBS12Q6ZW61 710 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 SNX27Q96L92 541 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 PLEKHA5Q9HAU0 1116 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 MORF4L1Q9UBU8 362 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 A0A0G2JND7 137 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 APOC4-APOC2K7ER74 178 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 APOC2P02655 101 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 ACADSBP45954 432 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 YWHAZP63104 245 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 CRADDP78560 199 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 MORF4L2Q15014 288 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 ERMARDQ5T6L9 678 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 LRRC38Q5VT99 294 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 TADA2BQ86TJ2 420 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 EXOC3L1Q86VI1 746 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 PYROXD2Q8N2H3 581 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 CELF6Q96J87 481 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 RILPQ96NA2 401 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 PAK5Q9P286 719 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 TRPV2Q9Y5S1 764 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 COL1A2P08123 1366 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 MCM3APO60318 1980 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 PRRC2BQ5JSZ5 2229 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 MEFVO15553 781 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 USP12O75317 370 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 PRKAR2AP13861 404 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 CRYBB1P53674 252 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 MRPS6P82932 125 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 BMPR2Q13873 1038 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 SEPT6Q14141 434 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 CES3Q6UWW8 571 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 SPATA2LQ8IUW3 424 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 SOCS4Q8WXH5 440 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 CYTH2Q99418 400 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 MAGEB5Q9BZ81 275 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 FAM105AQ9NUU6 356 aa12.94□□□□□ -0.34
SMARCA4-208ENST00000585799 ZC3H4Q9UPT8 1303 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms