RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 TAOK3Q9H2K8 898 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 PCDHA13Q9Y5I0 950 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 RBM8AQ9Y5S9 174 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 DGKBQ9Y6T7 804 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 ZNF521Q96K83 1311 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 MYH3P11055 1940 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 TSPY2A6NKD2 308 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 PHGDHO43175 533 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 C4BPAP04003 597 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 POU2F2P09086 479 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 TSPY3P0CV98 308 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 TSPY8P0CW00 308 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 C5AR1P21730 350 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 LMO1P25800 156 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 PTX3P26022 381 aaPredicted RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 CRKLP46109 303 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 RNASE9P60153 205 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 TSPY1Q01534 308 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 DDR1Q08345 913 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 RRS1Q15050 365 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 CC2D1BQ5T0F9 858 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 ITPRIPL1Q6GPH6 555 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 ATF7IPQ6VMQ6 1270 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 TAS1R1Q7RTX1 841 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 CXorf67Q86X51 503 aaPredicted RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 RASAL3Q86YV0 1011 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 LYSMD2Q8IV50 215 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 ZFPM1Q8IX07 1006 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 CMIPQ8IY22 773 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 MAFAQ8NHW3 353 aaPredicted RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 KAT5Q92993 513 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 ATP6V1E2Q96A05 226 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 SDCCAG3Q96C92 435 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 MED15Q96RN5 788 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 SEC62Q99442 399 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 MNTQ99583 582 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 SPATA5L1Q9BVQ7 753 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 SIK2Q9H0K1 926 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 TMEM8AQ9HCN3 771 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 ALG13Q9NP73 1137 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 IL23AQ9NPF7 189 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 TBC1D23Q9NUY8 699 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 FBLN5Q9UBX5 448 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 CFAP20Q9Y6A4 193 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 SALL1Q9NSC2 1324 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 FRMPD3Q5JV73 1810 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 MGAMO43451 1857 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 DDX60LQ5H9U9 1706 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 ZAR1LA6NP61 321 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 THAP12O43422 761 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 ZNF500O60304 480 aaPredicted RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 MBD4O95243 580 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 ARIH2O95376 493 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 EN2P19622 333 aaPredicted RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 ECHS1P30084 290 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 NF2P35240 595 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 ADCY8P40145 1251 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 GZMKP49863 264 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 NHLH1Q02575 133 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 NUCB1Q02818 461 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 GRAPQ13588 217 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 TOMM20Q15388 145 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 AKNAD1Q5T1N1 836 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 TEDDM1Q5T9Z0 273 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 HECTD2Q5U5R9 776 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 ZKSCAN2Q63HK3 967 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 RBM12BQ8IXT5 1001 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 ZNF808Q8N4W9 903 aaPredicted RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 OR14K1Q8NGZ2 314 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 OR14C36Q8NHC7 312 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 GRAPLQ8TC17 118 aaPredicted RBP2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 ERO1AQ96HE7 468 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 CLPTM1LQ96KA5 538 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 TAAR9Q96RI9 348 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 NDC1Q9BTX1 674 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 COA1Q9GZY4 146 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 BRD8Q9H0E9 1235 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 UCKL1Q9NWZ5 548 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 FAM30AQ9NZY2 134 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 ABCF2Q9UG63 623 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 TMPRSS11EQ9UL52 423 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 ARHGAP26Q9UNA1 814 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 B3GALT1Q9Y5Z6 326 aa2.15□□□□□ -2.07
SMCHD1-211ENST00000584897 LCHNA4D1U4 455 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 RRN3P2A6NIE6 340 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 RASA4BC9J798 803 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 PI4K2BG5E9Z4 385 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 NKRFO15226 690 aaKnown RBP eCLIP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 RASA4O43374 803 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 CSTBP04080 98 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 GNAI2P04899 355 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 LTA4HP09960 611 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 HSD3B1P14060 373 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 GRK6P43250 576 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 GPSM2P81274 684 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 MRPS9P82933 396 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 SLFN5Q08AF3 891 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 MPP3Q13368 585 aa2.14□□□□□ -2.07
SMCHD1-211ENST00000584897 RPS6KA2Q15349 733 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms