RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 CYP24A1Q07973 514 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 CUL4BQ13620 913 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 MAPRE1Q15691 268 aaKnown RBP11.88□□□□□ -0.51
CCDC47-206ENST00000584112 KNOP1Q1ED39 458 aaKnown RBP11.88□□□□□ -0.51
CCDC47-206ENST00000584112 CFAP221Q4G0U5 840 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 ZNF574Q6ZN55 896 aaPredicted RBP11.88□□□□□ -0.51
CCDC47-206ENST00000584112 TRAPPC11Q7Z392 1133 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 OSTM1Q86WC4 334 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 C12orf56Q8IXR9 622 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 CMTM8Q8IZV2 173 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 SYNPOQ8N3V7 929 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 RDH13Q8NBN7 331 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 BPIFB1Q8TDL5 484 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 MRPS31Q92665 395 aaKnown RBP11.88□□□□□ -0.51
CCDC47-206ENST00000584112 TRMT2BQ96GJ1 504 aaKnown RBP11.88□□□□□ -0.51
CCDC47-206ENST00000584112 FAM84AQ96KN4 292 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 SPATA32Q96LK8 384 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 PKMYT1Q99640 499 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 KIF9Q9HAQ2 790 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 SLC39A2Q9NP94 309 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 EXOC1Q9NV70 894 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 SERTAD1Q9UHV2 236 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 GTF3C4Q9UKN8 822 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 CDH9Q9ULB4 789 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 ATP6V1DQ9Y5K8 247 aa11.88□□□□□ -0.51
CCDC47-206ENST00000584112 DNHD1Q96M86 4753 aa11.87□□□□□ -0.51
CCDC47-206ENST00000584112 EXOC3O60645 756 aa11.87□□□□□ -0.51
CCDC47-206ENST00000584112 NOL4O94818 638 aa11.87□□□□□ -0.51
CCDC47-206ENST00000584112 PRAMEF12O95522 483 aa11.87□□□□□ -0.51
CCDC47-206ENST00000584112 HMGA1P17096 107 aaKnown RBP11.87□□□□□ -0.51
CCDC47-206ENST00000584112 WARSP23381 471 aaKnown RBP11.87□□□□□ -0.51
CCDC47-206ENST00000584112 CMA1P23946 247 aa11.87□□□□□ -0.51
CCDC47-206ENST00000584112 CYP2F1P24903 491 aa11.87□□□□□ -0.51
CCDC47-206ENST00000584112 MAGEA11P43364 429 aa11.87□□□□□ -0.51
CCDC47-206ENST00000584112 PSMD2Q13200 908 aa11.87□□□□□ -0.51
CCDC47-206ENST00000584112 UBAP2LQ14157 1087 aaKnown RBP11.87□□□□□ -0.51
CCDC47-206ENST00000584112 FAM171BQ6P995 826 aa11.87□□□□□ -0.51
CCDC47-206ENST00000584112 LIMS2Q7Z4I7 341 aa11.87□□□□□ -0.51
CCDC47-206ENST00000584112 RALGPS2Q86X27 583 aaPredicted RBP11.87□□□□□ -0.51
CCDC47-206ENST00000584112 GPIHBP1Q8IV16 184 aa11.87□□□□□ -0.51
CCDC47-206ENST00000584112 CCDC127Q96BQ5 260 aa11.87□□□□□ -0.51
CCDC47-206ENST00000584112 CEP295NLQ96MC4 621 aa11.87□□□□□ -0.51
CCDC47-206ENST00000584112 MMS19Q96T76 1030 aa11.87□□□□□ -0.51
CCDC47-206ENST00000584112 SYT15Q9BQS2 421 aa11.87□□□□□ -0.51
CCDC47-206ENST00000584112 SLC46A2Q9BY10 475 aa11.87□□□□□ -0.51
CCDC47-206ENST00000584112 GTSE1Q9NYZ3 720 aa11.87□□□□□ -0.51
CCDC47-206ENST00000584112 MAGEC2Q9UBF1 373 aaPredicted RBP11.87□□□□□ -0.51
CCDC47-206ENST00000584112 MAGED2Q9UNF1 606 aaPredicted RBP11.87□□□□□ -0.51
CCDC47-206ENST00000584112 CABIN1Q9Y6J0 2220 aa11.87□□□□□ -0.51
CCDC47-206ENST00000584112 ACTN4O43707 911 aaKnown RBP11.86□□□□□ -0.51
CCDC47-206ENST00000584112 TACC1O75410 805 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 STAU1O95793 577 aaKnown RBP11.86□□□□□ -0.51
CCDC47-206ENST00000584112 FAM163BP0C2L3 166 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 PFKFB1P16118 471 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 CR2P20023 1033 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 PTGER3P43115 390 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 GPR15P49685 360 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 AP3M2P53677 418 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 TNNC1P63316 161 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 SEMG2Q02383 582 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 TRPC3Q13507 836 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 DDR2Q16832 855 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 SCARA3Q6AZY7 606 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 SLC23A3Q6PIS1 610 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 VSTM1Q6UX27 236 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 TMEM150AQ86TG1 271 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 MON1AQ86VX9 555 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 NAXDQ8IW45 347 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 SCN4BQ8IWT1 228 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 GRAMD1CQ8IYS0 662 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 PDCD7Q8N8D1 485 aaKnown RBP11.86□□□□□ -0.51
CCDC47-206ENST00000584112 MAB21L3Q8N8X9 362 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 FSIP1Q8NA03 581 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.86□□□□□ -0.51
CCDC47-206ENST00000584112 KBTBD7Q8WVZ9 684 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 CCDC47Q96A33 483 aaKnown RBP11.86□□□□□ -0.51
CCDC47-206ENST00000584112 WBP1Q96G27 269 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 PAGE5Q96GU1 130 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 ZFYVE19Q96K21 471 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 MYRFLQ96LU7 910 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 SNX25Q9H3E2 840 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 TDP1Q9NUW8 608 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 GTF3C3Q9Y5Q9 886 aa11.86□□□□□ -0.51
CCDC47-206ENST00000584112 MYO18AQ92614 2054 aaKnown RBP11.86□□□□□ -0.51
CCDC47-206ENST00000584112 NBASA2RRP1 2371 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 A0A1B0GVL5 298 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 PLK4O00444 970 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 TERTO14746 1132 aaKnown RBP11.85□□□□□ -0.51
CCDC47-206ENST00000584112 RRP8O43159 456 aaKnown RBP11.85□□□□□ -0.51
CCDC47-206ENST00000584112 KLRC4O43908 158 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 RNF40O75150 1001 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 PHACTR2O75167 634 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 ATP2C2O75185 946 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 KIF20AO95235 890 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 APBB3O95704 486 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 ANXA13P27216 316 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 ATICP31939 592 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 SYKP43405 635 aa11.85□□□□□ -0.51
CCDC47-206ENST00000584112 PSMC1P62191 440 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms