RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	RPL7A	P62424	266 aa	Known RBP	12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	CRELD2	Q6UXH1	353 aa	Predicted RBP	12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	RFX8	Q6ZV50	586 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	SLC44A2	Q8IWA5	706 aa	Predicted RBP	12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	TRAPPC12	Q8WVT3	735 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	CKAP2	Q8WWK9	683 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	SLC7A3	Q8WY07	619 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	VPS50	Q96JG6	964 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	LRRC19	Q9H756	370 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	ZNF148	Q9UQR1	794 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	COQ4	Q9Y3A0	265 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	EXOC1L	A0A1B0GW35	172 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	SYNDIG1L	A6NDD5	238 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	FSCN2	O14926	492 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	FARP2	O94887	1054 aa	Predicted RBP	12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	SRGAP2C	P0DJJ0	459 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	UNG	P13051	313 aa	Predicted RBP	12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	ADORA2A	P29274	412 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	ALCAM	Q13740	583 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	TLDC1	Q6P9B6	456 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	ZBTB33	Q86T24	672 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	LRRC71	Q8N4P6	559 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	PPHLN1	Q8NEY8	458 aa	Known RBP	12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	NPLOC4	Q8TAT6	608 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	IFT74	Q96LB3	600 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	RUNDC3B	Q96NL0	473 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	ST6GALNAC4	Q9H4F1	302 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	ANKEF1	Q9NU02	776 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	KLHL14	Q9P2G3	628 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	TUBGCP4	Q9UGJ1	667 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	ZC3H7B	Q9UGR2	993 aa	Known RBP	12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	CPA4	Q9UI42	421 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	KIAA1257	Q9ULG3	409 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	RLF	Q13129	1914 aa		12.08	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	C2orf71	A6NGG8	1288 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	ATP9B	O43861	1147 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	CLASP2	O75122	1294 aa	Known RBP	12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	TMEM127	O75204	238 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	GAS8	O95995	478 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	RAC2	P15153	192 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	NDUFV2	P19404	249 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	TAC1	P20366	129 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	TUBA1B	P68363	451 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	MRPS35	P82673	323 aa	Known RBP	12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	ORC1	Q13415	861 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	BOLA3	Q53S33	107 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	XKR3	Q5GH77	459 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	TUBA1A	Q71U36	451 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	TRMT10C	Q7L0Y3	403 aa	Known RBP	12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	LRRN4	Q8WUT4	740 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	UTP4	Q969X6	686 aa	Known RBP	12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	ATP6V1E2	Q96A05	226 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	FBXL18	Q96ME1	805 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	MOGAT1	Q96PD6	335 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	STMN4	Q9H169	189 aa	Predicted RBP	12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	ADAM22	Q9P0K1	906 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	DNPEP	Q9ULA0	475 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	C15orf41	Q9Y2V0	281 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	ARL2BP	Q9Y2Y0	163 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	PRRT4	C9JH25	899 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	DGAT1	O75907	488 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	EPN2	O95208	641 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	GJB1	P08034	283 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	FGFR1	P11362	822 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	HSPA6	P17066	643 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	RPA3	P35244	121 aa	Predicted RBP	12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	NSF	P46459	744 aa	Known RBP	12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	ZNF157	P51786	506 aa	Predicted RBP	12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	EMC2	Q15006	297 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	CYP1B1	Q16678	543 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	SMTNL2	Q2TAL5	461 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	PLBD1	Q6P4A8	553 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	RHBDF2	Q6PJF5	856 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	UQCC2	Q9BRT2	126 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	MTMR12	Q9C0I1	747 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	ATP6V0A4	Q9HBG4	840 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	PAPOLB	Q9NRJ5	636 aa	Known RBP	12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	C1orf112	Q9NSG2	853 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	EXOC7	Q9UPT5	735 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	ZNF510	Q9Y2H8	683 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	PCDHB4	Q9Y5E5	795 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	KIAA1217	Q5T5P2	1943 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	TMEM221	A6NGB7	291 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	KPNA6	O60684	536 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	CSDE1	O75534	798 aa	Known RBP	12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	STAMBP	O95630	424 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	OAS1	P00973	400 aa	Known RBP	12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	CST3	P01034	146 aa	Predicted RBP	12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	PDHA1	P08559	390 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	FUT4	P22083	530 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	GLRA2	P23416	452 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	MAGEA4	P43358	317 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	GTF2A2	P52657	109 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	GPS1	Q13098	491 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	TNFAIP8L3	Q5GJ75	292 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	SCARA5	Q6ZMJ2	495 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	BEND5	Q7L4P6	421 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	ZBED8	Q8IZ13	594 aa		12.07	□□□□□ -0.48
CDK5RAP3-231	ENST00000584063	MS4A4A	Q96JQ5	239 aa		12.07	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms