RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 HEXIM2Q96MH2 286 aaKnown RBP10.45□□□□□ -0.74
SKA2-208ENST00000583927 ARID3AQ99856 593 aa10.45□□□□□ -0.74
SKA2-208ENST00000583927 SRRTQ9BXP5 876 aaKnown RBP10.45□□□□□ -0.74
SKA2-208ENST00000583927 CLSTN2Q9H4D0 955 aa10.45□□□□□ -0.74
SKA2-208ENST00000583927 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.45□□□□□ -0.747e-8■■■■■ 186.3
SKA2-208ENST00000583927 CLIC5Q9NZA1 410 aa10.45□□□□□ -0.74
SKA2-208ENST00000583927 TBC1D14Q9P2M4 693 aa10.45□□□□□ -0.74
SKA2-208ENST00000583927 CHORDC1Q9UHD1 332 aaPredicted RBP10.45□□□□□ -0.74
SKA2-208ENST00000583927 DNAH14Q0VDD8 3507 aa10.44□□□□□ -0.74
SKA2-208ENST00000583927 CHURC1-FNTBB4DL54 471 aa10.44□□□□□ -0.74
SKA2-208ENST00000583927 TLR5O60602 858 aa10.44□□□□□ -0.74
SKA2-208ENST00000583927 GFRA3O60609 400 aa10.44□□□□□ -0.74
SKA2-208ENST00000583927 LILRB5O75023 590 aa10.44□□□□□ -0.74
SKA2-208ENST00000583927 PAEPP09466 180 aa10.44□□□□□ -0.74
SKA2-208ENST00000583927 CCDC192P0DO97 292 aa10.44□□□□□ -0.74
SKA2-208ENST00000583927 ARSAP15289 507 aa10.44□□□□□ -0.74
SKA2-208ENST00000583927 ADORA2BP29275 332 aa10.44□□□□□ -0.74
SKA2-208ENST00000583927 EIF2DP41214 584 aaKnown RBP10.44□□□□□ -0.74
SKA2-208ENST00000583927 SLC8A3P57103 927 aa10.44□□□□□ -0.74
SKA2-208ENST00000583927 GRSF1Q12849 480 aaKnown RBP eCLIP10.44□□□□□ -0.74
SKA2-208ENST00000583927 PON2Q15165 354 aa10.44□□□□□ -0.74
SKA2-208ENST00000583927 STILQ15468 1287 aa10.44□□□□□ -0.74
SKA2-208ENST00000583927 SCML4Q8N228 414 aa10.44□□□□□ -0.74
SKA2-208ENST00000583927 CCDC26Q8TAB7 109 aa10.44□□□□□ -0.74
SKA2-208ENST00000583927 FAM81BQ96LP2 452 aa10.44□□□□□ -0.74
SKA2-208ENST00000583927 NT5C1BQ96P26 610 aa10.44□□□□□ -0.74
SKA2-208ENST00000583927 CDK5RAP1Q96SZ6 601 aaKnown RBP10.44□□□□□ -0.74
SKA2-208ENST00000583927 ZSCAN32Q9NX65 697 aa10.44□□□□□ -0.74
SKA2-208ENST00000583927 GMIPQ9P107 970 aa10.44□□□□□ -0.74
SKA2-208ENST00000583927 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.44□□□□□ -0.74
SKA2-208ENST00000583927 NUP205Q92621 2012 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 CEP192Q8TEP8 1941 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 GPR179Q6PRD1 2367 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 A0A0A0MRY4 1105 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 CCDC163A0A0D9SF12 145 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 GTPBP10A4D1E9 387 aaKnown RBP10.43□□□□□ -0.74
SKA2-208ENST00000583927 XPO1O14980 1071 aaKnown RBP10.43□□□□□ -0.74
SKA2-208ENST00000583927 ATG13O75143 517 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 ABL1P00519 1130 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 LMNAP02545 664 aaKnown RBP10.43□□□□□ -0.74
SKA2-208ENST00000583927 AFPP02771 609 aaKnown RBP10.43□□□□□ -0.74
SKA2-208ENST00000583927 MBL2P11226 248 aaPredicted RBP10.43□□□□□ -0.74
SKA2-208ENST00000583927 VDRP11473 427 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 ACO1P21399 889 aaKnown RBP10.43□□□□□ -0.74
SKA2-208ENST00000583927 ATP5C1P36542 298 aaKnown RBP10.43□□□□□ -0.74
SKA2-208ENST00000583927 CXCL12P48061 93 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 BCAT1P54687 386 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 CSTF1Q05048 431 aaKnown RBP10.43□□□□□ -0.74
SKA2-208ENST00000583927 IFRD2Q12894 506 aaPredicted RBP10.43□□□□□ -0.74
SKA2-208ENST00000583927 CAMK4Q16566 473 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 MEA1Q16626 185 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 GAB4Q2WGN9 574 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 ZNF394Q53GI3 561 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 SGO2Q562F6 1265 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 PM20D1Q6GTS8 502 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 FSTL4Q6MZW2 842 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 HTR3DQ70Z44 454 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 ASCL5Q7RTU5 278 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 GPRIN1Q7Z2K8 1008 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 TADA2BQ86TJ2 420 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 EHBP1Q8NDI1 1231 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 CD101Q93033 1021 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 MED15Q96RN5 788 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 P2RY13Q9BPV8 354 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 LINC00597Q9H2U6 94 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 CCSER2Q9H7U1 834 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 LMBRD1Q9NUN5 540 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.43□□□□□ -0.74
SKA2-208ENST00000583927 CNTN6Q9UQ52 1028 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 WNT6Q9Y6F9 365 aa10.43□□□□□ -0.74
SKA2-208ENST00000583927 O00370 1275 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 GREM1O60565 184 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 CYP17A1P05093 508 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 SETSIPP0DME0 302 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 ERCC5P28715 1186 aaPredicted RBP10.42□□□□□ -0.74
SKA2-208ENST00000583927 PLA2G4AP47712 749 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 PGFP49763 221 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 GALK1P51570 392 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 ZNF132P52740 706 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 STX17P56962 302 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 GOLGA8FQ08AF8 430 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 GOLGA8DPQ0D2H9 430 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 BST2Q10589 180 aaKnown RBP10.42□□□□□ -0.74
SKA2-208ENST00000583927 PKDCCQ504Y2 493 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 LCLAT1Q6UWP7 414 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 ENOSF1Q7L5Y1 443 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 TTC30AQ86WT1 665 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 IRF2BP1Q8IU81 584 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 ARHGAP18Q8N392 663 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 PPM1KQ8N3J5 372 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 TTC8Q8TAM2 541 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 KCTD13Q8WZ19 329 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 KLF16Q9BXK1 252 aaPredicted RBP10.42□□□□□ -0.74
SKA2-208ENST00000583927 NUP62CLQ9H1M0 184 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 EPC1Q9H2F5 836 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 OSER1Q9NX31 292 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 CFAP97Q9P2B7 532 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 DACH1Q9UI36 760 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 TSPAN16Q9UKR8 245 aa10.42□□□□□ -0.74
SKA2-208ENST00000583927 CEP250Q9BV73 2442 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms