RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 CENPCQ03188 943 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 COL19A1Q14993 1142 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 PABPC1LQ4VXU2 614 aaKnown RBP11.51□□□□□ -0.57
TOP3A-216ENST00000583804 RAB41Q5JT25 222 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 ATAT1Q5SQI0 421 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 OR6B2Q6IFH4 312 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 PPP1R2P3Q6NXS1 205 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 H2AFVQ71UI9 128 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 PDZD4Q76G19 769 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-216ENST00000583804 GPR149Q86SP6 731 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 MAFAQ8NHW3 353 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-216ENST00000583804 HLA-CQ95604 372 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 SLITRK1Q96PX8 696 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 UBE2ZQ9H832 354 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-216ENST00000583804 ZNF334Q9HCZ1 680 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-216ENST00000583804 CYLDQ9NQC7 956 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 CNGB3Q9NQW8 809 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 UXTQ9UBK9 157 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-216ENST00000583804 CDH22Q9UJ99 828 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 SCML2Q9UQR0 700 aa11.51□□□□□ -0.57
TOP3A-216ENST00000583804 PTPRDP23468 1912 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 MTCL1Q9Y4B5 1905 aaKnown RBP11.5□□□□□ -0.57
TOP3A-216ENST00000583804 FBXO21O94952 628 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 CALB1P05937 261 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 RHOP08100 348 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 POU2F2P09086 479 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 GABRR2P28476 465 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 NOP2P46087 812 aaKnown RBP11.5□□□□□ -0.57
TOP3A-216ENST00000583804 RPL34P49207 117 aaKnown RBP11.5□□□□□ -0.57
TOP3A-216ENST00000583804 ITIH3Q06033 890 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 KIF5AQ12840 1032 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 PHF13Q86YI8 300 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-216ENST00000583804 TMC8Q8IU68 726 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 CLEC4CQ8WTT0 213 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 TRMT2BQ96GJ1 504 aaKnown RBP11.5□□□□□ -0.57
TOP3A-216ENST00000583804 MSLNLQ96KJ4 702 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 MYRFLQ96LU7 910 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 RIPOR3Q96MK2 946 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 GCNAQ96QF7 691 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 TTLL2Q9BWV7 592 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 LRRC3Q9BY71 257 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 S1PR5Q9H228 398 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 ATXN3LQ9H3M9 355 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 IL37Q9NZH6 218 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 TRPM5Q9NZQ8 1165 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 GMIPQ9P107 970 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 CD207Q9UJ71 328 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 SALL4Q9UJQ4 1053 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 USP3Q9Y6I4 520 aa11.5□□□□□ -0.57
TOP3A-216ENST00000583804 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-216ENST00000583804 A0A1W2PQH9 124 aa11.49□□□□□ -0.57
TOP3A-216ENST00000583804 A0A1W2PRU2 124 aa11.49□□□□□ -0.57
TOP3A-216ENST00000583804 ZNF197O14709 1029 aa11.49□□□□□ -0.57
TOP3A-216ENST00000583804 PAPSS1O43252 624 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-216ENST00000583804 FGF19O95750 216 aa11.49□□□□□ -0.57
TOP3A-216ENST00000583804 GJA1P17302 382 aa11.49□□□□□ -0.57
TOP3A-216ENST00000583804 RRM1P23921 792 aa11.49□□□□□ -0.57
TOP3A-216ENST00000583804 DAOAP59103 153 aa11.49□□□□□ -0.57
TOP3A-216ENST00000583804 MRPS5P82675 430 aaKnown RBP11.49□□□□□ -0.57
TOP3A-216ENST00000583804 PM20D1Q6GTS8 502 aa11.49□□□□□ -0.57
TOP3A-216ENST00000583804 FAM183BPQ6ZVS7 135 aa11.49□□□□□ -0.57
TOP3A-216ENST00000583804 MCOLN2Q8IZK6 566 aa11.49□□□□□ -0.57
TOP3A-216ENST00000583804 LEMD2Q8NC56 503 aa11.49□□□□□ -0.57
TOP3A-216ENST00000583804 CTNNBL1Q8WYA6 563 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-216ENST00000583804 ZNF592Q92610 1267 aa11.49□□□□□ -0.57
TOP3A-216ENST00000583804 GOLGA1Q92805 767 aa11.49□□□□□ -0.57
TOP3A-216ENST00000583804 BTBD6Q96KE9 485 aa11.49□□□□□ -0.57
TOP3A-216ENST00000583804 ISCUQ9H1K1 167 aa11.49□□□□□ -0.57
TOP3A-216ENST00000583804 GOLPH3Q9H4A6 298 aa11.49□□□□□ -0.57
TOP3A-216ENST00000583804 OSGEPQ9NPF4 335 aa11.49□□□□□ -0.57
TOP3A-216ENST00000583804 LUC7LQ9NQ29 371 aaKnown RBP11.49□□□□□ -0.57
TOP3A-216ENST00000583804 TLR8Q9NR97 1041 aaKnown RBP11.49□□□□□ -0.57
TOP3A-216ENST00000583804 CNOT8Q9UFF9 292 aaKnown RBP11.49□□□□□ -0.57
TOP3A-216ENST00000583804 STRIP2Q9ULQ0 834 aa11.49□□□□□ -0.57
TOP3A-216ENST00000583804 MRPS23Q9Y3D9 190 aaKnown RBP11.49□□□□□ -0.57
TOP3A-216ENST00000583804 FAM92AA1XBS5 289 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 YJEFN3A6XGL0 299 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 E7ENQ6 273 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 SART1O43290 800 aaKnown RBP11.48□□□□□ -0.57
TOP3A-216ENST00000583804 GRAP2O75791 330 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 PAPLNO95428 1278 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 F11P03951 625 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 FSHRP23945 695 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 CDC25CP30307 473 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 MTHFRP42898 656 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 GABRB2P47870 512 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 PGFP49763 221 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 DNA2P51530 1060 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 EPHA5P54756 1037 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 RNASE9P60153 205 aaKnown RBP11.48□□□□□ -0.57
TOP3A-216ENST00000583804 YWHAGP61981 247 aaKnown RBP eCLIP11.48□□□□□ -0.57
TOP3A-216ENST00000583804 SLC6A3Q01959 620 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 PTP4A2Q12974 167 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 ZNF268Q14587 947 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-216ENST00000583804 FAM102AQ5T9C2 384 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-216ENST00000583804 GAREM2Q75VX8 874 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 MON1BQ7L1V2 547 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 MON1AQ86VX9 555 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 XYLT1Q86Y38 959 aa11.48□□□□□ -0.57
TOP3A-216ENST00000583804 ZDHHC17Q8IUH5 632 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms