RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 USP46P62068 366 aa17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 PLD1Q13393 1074 aa17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 PPP1R15BQ5SWA1 713 aa17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 PTCRAQ6ISU1 281 aaPredicted RBP17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 DNAJC24Q6P3W2 148 aa17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 ZSCAN30Q86W11 494 aa17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 RHOT2Q8IXI1 618 aa17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 C17orf53Q8N3J3 647 aaPredicted RBP17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 FEZF2Q8TBJ5 459 aa17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 CLEC4CQ8WTT0 213 aa17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 RFFLQ8WZ73 363 aa17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 IRGQQ8WZA9 623 aa17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 CDCA3Q99618 268 aaPredicted RBP17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 NUP85Q9BW27 656 aa17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 FBXO44Q9H4M3 255 aa17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 LZTFL1Q9NQ48 299 aa17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 UVRAGQ9P2Y5 699 aa17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 SCML2Q9UQR0 700 aa17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 MUC6Q6W4X9 2439 aa17.17■□□□□ 0.34
CDK5RAP3-228ENST00000583363 ATG2AQ2TAZ0 1938 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 MTCL1Q9Y4B5 1905 aaKnown RBP17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 GOLGA6L9A6NEM1 432 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 GRXCR2A6NFK2 248 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 MTA2O94776 668 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 GJB6O95452 261 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 C8AP07357 584 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 CSH1P0DML2 217 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 CSH2P0DML3 217 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 KRT3P12035 628 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 YWHAQP27348 245 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 NRIP1P48552 1158 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 EPHB3P54753 998 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 MTMR3Q13615 1198 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 TAF5Q15542 800 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 EFHC1Q5JVL4 640 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 BHLHA9Q7RTU4 235 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 DNAJB7Q7Z6W7 309 aaPredicted RBP17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 RNF10Q8N5U6 811 aaKnown RBP17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 STKLD1Q8NE28 680 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 SLC7A14Q8TBB6 771 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 PIWIL1Q96J94 861 aaKnown RBP17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 SELENOOQ9BVL4 669 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 TTLL2Q9BWV7 592 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 OSGEPQ9NPF4 335 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 ASNSD1Q9NWL6 643 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 CTTNBP2NLQ9P2B4 639 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 TMEM59LQ9UK28 342 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 GUCA1BQ9UMX6 200 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 ASB3Q9Y575 518 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 PAXBP1Q9Y5B6 917 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 HCFC2Q9Y5Z7 792 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 SCINQ9Y6U3 715 aa17.16■□□□□ 0.34
CDK5RAP3-228ENST00000583363 TMEM191CA6NGB0 347 aa17.15■□□□□ 0.34
CDK5RAP3-228ENST00000583363 H3BQ06 376 aaPredicted RBP17.15■□□□□ 0.34
CDK5RAP3-228ENST00000583363 SART1O43290 800 aaKnown RBP17.15■□□□□ 0.34
CDK5RAP3-228ENST00000583363 ZMYND10O75800 440 aa17.15■□□□□ 0.34
CDK5RAP3-228ENST00000583363 GLI1P08151 1106 aa17.15■□□□□ 0.34
CDK5RAP3-228ENST00000583363 HMGA1P17096 107 aaKnown RBP17.15■□□□□ 0.34
CDK5RAP3-228ENST00000583363 NOP2P46087 812 aaKnown RBP17.15■□□□□ 0.34
CDK5RAP3-228ENST00000583363 HADHBP55084 474 aaKnown RBP17.15■□□□□ 0.34
CDK5RAP3-228ENST00000583363 KCNC3Q14003 757 aa17.15■□□□□ 0.34
CDK5RAP3-228ENST00000583363 ARHGAP29Q52LW3 1261 aa17.15■□□□□ 0.34
CDK5RAP3-228ENST00000583363 PPM1LQ5SGD2 360 aa17.15■□□□□ 0.34
CDK5RAP3-228ENST00000583363 FAM102AQ5T9C2 384 aaPredicted RBP17.15■□□□□ 0.34
CDK5RAP3-228ENST00000583363 SLC26A9Q7LBE3 791 aa17.15■□□□□ 0.34
CDK5RAP3-228ENST00000583363 ARCQ7LC44 396 aa17.15■□□□□ 0.34
CDK5RAP3-228ENST00000583363 PPP2R3CQ969Q6 453 aa17.15■□□□□ 0.34
CDK5RAP3-228ENST00000583363 CALR3Q96L12 384 aaKnown RBP17.15■□□□□ 0.34
CDK5RAP3-228ENST00000583363 MYRFLQ96LU7 910 aa17.15■□□□□ 0.34
CDK5RAP3-228ENST00000583363 NSUN3Q9H649 340 aaKnown RBP17.15■□□□□ 0.34
CDK5RAP3-228ENST00000583363 MAN1C1Q9NR34 630 aa17.15■□□□□ 0.34
CDK5RAP3-228ENST00000583363 EHD2Q9NZN4 543 aa17.15■□□□□ 0.34
CDK5RAP3-228ENST00000583363 DPP7Q9UHL4 492 aa17.15■□□□□ 0.34
CDK5RAP3-228ENST00000583363 PLXNA3P51805 1871 aa17.15■□□□□ 0.34
CDK5RAP3-228ENST00000583363 YJEFN3A6XGL0 299 aa17.14■□□□□ 0.33
CDK5RAP3-228ENST00000583363 PRR33A8MZF0 331 aa17.14■□□□□ 0.33
CDK5RAP3-228ENST00000583363 E7ENQ6 273 aa17.14■□□□□ 0.33
CDK5RAP3-228ENST00000583363 LRG1P02750 347 aa17.14■□□□□ 0.33
CDK5RAP3-228ENST00000583363 RFC1P35251 1148 aaPredicted RBP17.14■□□□□ 0.33
CDK5RAP3-228ENST00000583363 RPL7AP62424 266 aaKnown RBP17.14■□□□□ 0.33
CDK5RAP3-228ENST00000583363 IFRD2Q12894 506 aaPredicted RBP17.14■□□□□ 0.33
CDK5RAP3-228ENST00000583363 TAF10Q12962 218 aa17.14■□□□□ 0.33
CDK5RAP3-228ENST00000583363 VEPH1Q14D04 833 aa17.14■□□□□ 0.33
CDK5RAP3-228ENST00000583363 DCUN1D2Q6PH85 259 aa17.14■□□□□ 0.33
CDK5RAP3-228ENST00000583363 HFE2Q6ZVN8 426 aa17.14■□□□□ 0.33
CDK5RAP3-228ENST00000583363 ITIH5Q86UX2 942 aa17.14■□□□□ 0.33
CDK5RAP3-228ENST00000583363 MON1AQ86VX9 555 aa17.14■□□□□ 0.33
CDK5RAP3-228ENST00000583363 JOSD2Q8TAC2 188 aa17.14■□□□□ 0.33
CDK5RAP3-228ENST00000583363 ZNF564Q8TBZ8 553 aaPredicted RBP17.14■□□□□ 0.33
CDK5RAP3-228ENST00000583363 PSMG2Q969U7 264 aa17.14■□□□□ 0.33
CDK5RAP3-228ENST00000583363 METTL5Q9NRN9 209 aaKnown RBP17.14■□□□□ 0.33
CDK5RAP3-228ENST00000583363 PATJQ8NI35 1801 aa17.13■□□□□ 0.33
CDK5RAP3-228ENST00000583363 MACROD2A1Z1Q3 448 aa17.13■□□□□ 0.33
CDK5RAP3-228ENST00000583363 BUB1O43683 1085 aa17.13■□□□□ 0.33
CDK5RAP3-228ENST00000583363 HSF2BPO75031 334 aa17.13■□□□□ 0.33
CDK5RAP3-228ENST00000583363 GRAP2O75791 330 aa17.13■□□□□ 0.33
CDK5RAP3-228ENST00000583363 FYNP06241 537 aa17.13■□□□□ 0.33
CDK5RAP3-228ENST00000583363 HOXA9P31269 272 aa17.13■□□□□ 0.33
CDK5RAP3-228ENST00000583363 GTF2F1P35269 517 aaKnown RBP eCLIP17.13■□□□□ 0.33
CDK5RAP3-228ENST00000583363 NAP1L1P55209 391 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms