RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 NLRP9Q7RTR0 991 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 TDRPQ86YL5 185 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 ZIM3Q96PE6 472 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 RBM15Q96T37 977 aaKnown RBP eCLIP10.54□□□□□ -0.724e-6■■□□□ 14.5
TRAPPC8-211ENST00000582539 DDX23Q9BUQ8 820 aaKnown RBP10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 EIF2B3Q9NR50 452 aaKnown RBP10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 BCLAF3A2AJT9 711 aaKnown RBP10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 PIRO00625 290 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 ELF1P32519 619 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 NBPF20Q3BBV1 942 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 XKR4Q5GH76 650 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 UNC45BQ8IWX7 931 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 CALML6Q8TD86 181 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 FAM172AQ8WUF8 416 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 SIKE1Q9BRV8 207 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 XYLT2Q9H1B5 865 aa10.54□□□□□ -0.72
TRAPPC8-211ENST00000582539 POLD2P49005 469 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 TUFMP49411 452 aaKnown RBP10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 HDAC4P56524 1084 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 BASP1P80723 227 aaKnown RBP10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 SLC25A52Q3SY17 297 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 NUGGCQ68CJ6 796 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 ACOT1Q86TX2 421 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 MFN1Q8IWA4 741 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 ELMOD1Q8N336 334 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 SPPL2BQ8TCT7 592 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 LRRC8CQ8TDW0 803 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 FGD4Q96M96 766 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 EPN3Q9H201 632 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 SMYD3Q9H7B4 428 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 DDX43Q9NXZ2 648 aaKnown RBP10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 BCAP29Q9UHQ4 241 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 ST3GAL5Q9UNP4 418 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 AP4E1Q9UPM8 1137 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 KIAA1217Q5T5P2 1943 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 SELPP16109 830 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 TPSB2P20231 275 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 FLT3LGP49771 235 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 ITGA8P53708 1063 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 SLC18A1P54219 525 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 GEMP55040 296 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 TPSAB1Q15661 275 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 AMHR2Q16671 573 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 EMC10Q5UCC4 262 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 OVOS1Q6IE37 1185 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 RNF169Q8NCN4 708 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 C1orf54Q8WWF1 131 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 CREBZFQ9NS37 354 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 TAS2R14Q9NYV8 317 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 POLIQ9UNA4 740 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 GMNCA6NCL1 334 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 TMEM189-UBE2V1I3L0A0 370 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 KIAA1841Q6NSI8 718 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 NACA2Q9H009 215 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 NOVA2Q9UNW9 492 aaKnown RBP10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 FZD1Q9UP38 647 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 VPS9D1Q9Y2B5 631 aa10.53□□□□□ -0.72
TRAPPC8-211ENST00000582539 ARID2Q68CP9 1835 aa10.52□□□□□ -0.72
TRAPPC8-211ENST00000582539 GPR32O75388 356 aa10.52□□□□□ -0.72
TRAPPC8-211ENST00000582539 PFKMP08237 780 aa10.52□□□□□ -0.72
TRAPPC8-211ENST00000582539 HPDP32754 393 aaPredicted RBP10.52□□□□□ -0.72
TRAPPC8-211ENST00000582539 NPY2RP49146 381 aa10.52□□□□□ -0.72
TRAPPC8-211ENST00000582539 GEMIN4P57678 1058 aaKnown RBP10.52□□□□□ -0.72
TRAPPC8-211ENST00000582539 YWHAGP61981 247 aaKnown RBP eCLIP10.52□□□□□ -0.72
TRAPPC8-211ENST00000582539 ITGA7Q13683 1181 aa10.52□□□□□ -0.72
TRAPPC8-211ENST00000582539 ANKS3Q6ZW76 656 aa10.52□□□□□ -0.72
TRAPPC8-211ENST00000582539 LMNTD2Q8IXW0 634 aa10.52□□□□□ -0.72
TRAPPC8-211ENST00000582539 IQCKQ8N0W5 287 aa10.52□□□□□ -0.72
TRAPPC8-211ENST00000582539 CMASQ8NFW8 434 aaPredicted RBP10.52□□□□□ -0.72
TRAPPC8-211ENST00000582539 BCAS4Q8TDM0 211 aa10.52□□□□□ -0.72
TRAPPC8-211ENST00000582539 RNF157Q96PX1 679 aa10.52□□□□□ -0.72
TRAPPC8-211ENST00000582539 RAB3IPQ96QF0 476 aaPredicted RBP10.52□□□□□ -0.72
TRAPPC8-211ENST00000582539 TM9SF1O15321 606 aa10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 B4GALT5O43286 388 aa10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 DCTN3O75935 186 aa10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 PRKAR2AP13861 404 aaKnown RBP10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 PPM1AP35813 382 aa10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 CCT5P48643 541 aa10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 CRHR2Q13324 411 aa10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 MKRN4PQ13434 485 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 NOMO2Q5JPE7 1267 aa10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 MYCBPAPQ8TBZ2 947 aa10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 PRKD2Q9BZL6 878 aa10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 GOLPH3Q9H4A6 298 aa10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 TMEM161AQ9NX61 479 aa10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 ARHGAP42A6NI28 874 aa10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 ZBTB42B2RXF5 422 aa10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 VIMP08670 466 aaKnown RBP10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 MIPP30301 263 aa10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 MAGEA11P43364 429 aa10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 SCNN1GP51170 649 aa10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 MRPS5P82675 430 aaKnown RBP10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 YWHAHQ04917 246 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 NOMO1Q15155 1222 aa10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 SLC45A4Q5BKX6 768 aa10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 ITIH5Q86UX2 942 aa10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.52□□□□□ -0.73
TRAPPC8-211ENST00000582539 PRKAG2Q9UGJ0 569 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms