RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 DENND5BQ6ZUT9 1274 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 ZNF605Q86T29 641 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 OSTM1Q86WC4 334 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 DDX42Q86XP3 938 aaKnown RBP eCLIP8.13□□□□□ -1.11
CCDC47-205ENST00000582331 NT5DC4Q86YG4 428 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 MARCH9Q86YJ5 346 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 PHTF2Q8N3S3 785 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 NAT16Q8N8M0 369 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 RDH13Q8NBN7 331 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 RHBDD1Q8TEB9 315 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 IPO4Q8TEX9 1081 aaKnown RBP8.13□□□□□ -1.11
CCDC47-205ENST00000582331 FOXJ1Q92949 421 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 CDK5RAP3Q96JB5 506 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 CEP295NLQ96MC4 621 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 PRDM16Q9HAZ2 1276 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 CFAP97Q9P2B7 532 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 DEC1Q9P2X7 70 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 AGO2Q9UKV8 859 aaKnown RBP8.13□□□□□ -1.11
CCDC47-205ENST00000582331 ODF2LQ9ULJ1 636 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 AGAP1Q9UPQ3 857 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 PCDHB6Q9Y5E3 794 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 PTPRBP23467 1997 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 MYH11P35749 1972 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 ANAPC1Q9H1A4 1944 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 KALRNO60229 2985 aa8.13□□□□□ -1.11
CCDC47-205ENST00000582331 HELZP42694 1942 aaKnown RBP8.12□□□□□ -1.11
CCDC47-205ENST00000582331 E2F8A0AVK6 867 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 RNF223E7ERA6 249 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 GABRDO14764 452 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 ATXN7O15265 892 aaPredicted RBP8.12□□□□□ -1.11
CCDC47-205ENST00000582331 TRAK2O60296 914 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 ATP2C2O75185 946 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 TULP3O75386 442 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 C1QL1O75973 258 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 DKK1O94907 266 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 FAM13AO94988 1023 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 CER1O95813 267 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 OLFM2O95897 454 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 ITGB3P05106 788 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 ATXN1LP0C7T5 689 aaKnown RBP8.12□□□□□ -1.11
CCDC47-205ENST00000582331 ZNF883P0CG24 379 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 BDNFP23560 247 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 ANXA13P27216 316 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 MATKP42679 507 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 TOB1P50616 345 aaPredicted RBP8.12□□□□□ -1.11
CCDC47-205ENST00000582331 ANAPC15P60006 121 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 USP46P62068 366 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 TFAMQ00059 246 aaKnown RBP8.12□□□□□ -1.11
CCDC47-205ENST00000582331 GTF2BQ00403 316 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 C10orf76Q5T2E6 689 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 FAM171BQ6P995 826 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 VSTM1Q6UX27 236 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 CRELD2Q6UXH1 353 aaPredicted RBP8.12□□□□□ -1.11
CCDC47-205ENST00000582331 ETFBKMTQ8IXQ9 262 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 CHPFQ8IZ52 775 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 ADGRF2Q8IZF7 708 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 LRRC52Q8N7C0 313 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 LSM14AQ8ND56 463 aaKnown RBP8.12□□□□□ -1.11
CCDC47-205ENST00000582331 FBXO18Q8NFZ0 1043 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 PIP4K2CQ8TBX8 421 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 CACTINQ8WUQ7 758 aaKnown RBP8.12□□□□□ -1.11
CCDC47-205ENST00000582331 DNASE2BQ8WZ79 361 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 OTUB2Q96DC9 234 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 REEP2Q9BRK0 252 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 TTLL2Q9BWV7 592 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 ZHX3Q9H4I2 956 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 GAREM1Q9H706 876 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 IL21RQ9HBE5 538 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 PARVGQ9HBI0 331 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 TM7SF3Q9NS93 570 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 TOR4AQ9NXH8 423 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 GDAP2Q9NXN4 497 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 HCN2Q9UL51 889 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 STARD13Q9Y3M8 1113 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 RAI2Q9Y5P3 530 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 SNX9Q9Y5X1 595 aa8.12□□□□□ -1.11
CCDC47-205ENST00000582331 FAM149AA5PLN7 773 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 MEI4A8MW99 385 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 TISP43B9A030 160 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 E9PAM4 449 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 FLRT2O43155 660 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 HOXC11O43248 304 aaPredicted RBP8.11□□□□□ -1.11
CCDC47-205ENST00000582331 HCRTO43612 131 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 EIF5BO60841 1220 aaKnown RBP8.11□□□□□ -1.11
CCDC47-205ENST00000582331 CILPO75339 1184 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 OAS1P00973 400 aaKnown RBP8.11□□□□□ -1.11
CCDC47-205ENST00000582331 KRT18P05783 430 aaKnown RBP8.11□□□□□ -1.11
CCDC47-205ENST00000582331 MBL2P11226 248 aaPredicted RBP8.11□□□□□ -1.11
CCDC47-205ENST00000582331 PLCG1P19174 1290 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 CD6P30203 668 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 ZNF131P52739 623 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 CYP27A1Q02318 531 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 DHX8Q14562 1220 aaKnown RBP8.11□□□□□ -1.11
CCDC47-205ENST00000582331 SUZ12Q15022 739 aaKnown RBP8.11□□□□□ -1.11
CCDC47-205ENST00000582331 MAPRE1Q15691 268 aaKnown RBP8.11□□□□□ -1.11
CCDC47-205ENST00000582331 ANO4Q32M45 955 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 TDRD10Q5VZ19 366 aaKnown RBP8.11□□□□□ -1.11
CCDC47-205ENST00000582331 EGFLAMQ63HQ2 1017 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 IL27RAQ6UWB1 636 aa8.11□□□□□ -1.11
CCDC47-205ENST00000582331 KIAA1324Q6UXG2 1013 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms